RNA–Protein interactions for RNA: ENST00000483558.5

PKD1-215, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 577 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-215ENST00000483558 CGNL1Q0VF96 1302 aa23.96■■□□□ 1.43
PKD1-215ENST00000483558 PCDH11XQ9BZA7 1347 aa23.96■■□□□ 1.43
PKD1-215ENST00000483558 PCDH11YQ9BZA8 1340 aa23.96■■□□□ 1.43
PKD1-215ENST00000483558 CCDC87Q9NVE4 849 aa23.96■■□□□ 1.43
PKD1-215ENST00000483558 TMF1P82094 1093 aa23.95■■□□□ 1.42
PKD1-215ENST00000483558 L3MBTL2Q969R5 705 aa23.95■■□□□ 1.42
PKD1-215ENST00000483558 ATP6V1AP38606 617 aa23.94■■□□□ 1.42
PKD1-215ENST00000483558 RRS1Q15050 365 aaKnown RBP23.94■■□□□ 1.42
PKD1-215ENST00000483558 A0A1W2PP64 1363 aa23.93■■□□□ 1.42
PKD1-215ENST00000483558 NLGN1Q8N2Q7 840 aa23.93■■□□□ 1.42
PKD1-215ENST00000483558 COG3Q96JB2 828 aa23.93■■□□□ 1.42
PKD1-215ENST00000483558 PIM2Q9P1W9 311 aa23.93■■□□□ 1.42
PKD1-215ENST00000483558 ROCK2O75116 1388 aaKnown RBP23.92■■□□□ 1.42
PKD1-215ENST00000483558 TRAPPC3LQ5T215 181 aa23.92■■□□□ 1.42
PKD1-215ENST00000483558 DCAF5Q96JK2 942 aa23.92■■□□□ 1.42
PKD1-215ENST00000483558 TERF2IPQ9NYB0 399 aa23.92■■□□□ 1.42
PKD1-215ENST00000483558 ASAP1Q9ULH1 1129 aa23.92■■□□□ 1.42
PKD1-215ENST00000483558 DALRD3Q5D0E6 543 aaKnown RBP23.91■■□□□ 1.42
PKD1-215ENST00000483558 PARP3Q9Y6F1 533 aa23.91■■□□□ 1.42
PKD1-215ENST00000483558 MKRN1Q9UHC7 482 aaKnown RBP23.9■■□□□ 1.42
PKD1-215ENST00000483558 FOXN1O15353 648 aa23.89■■□□□ 1.41
PKD1-215ENST00000483558 C4AP0C0L4 1744 aa23.89■■□□□ 1.41
PKD1-215ENST00000483558 FAM161AQ3B820 660 aa23.88■■□□□ 1.41
PKD1-215ENST00000483558 ARHGEF1Q92888 912 aaKnown RBP23.88■■□□□ 1.41
PKD1-215ENST00000483558 VEGFAP15692 232 aaPredicted RBP23.87■■□□□ 1.41
PKD1-215ENST00000483558 CHRNA5P30532 468 aa23.87■■□□□ 1.41
PKD1-215ENST00000483558 RTCBQ9Y3I0 505 aaKnown RBP23.87■■□□□ 1.41
PKD1-215ENST00000483558 GYS1P13807 737 aa23.86■■□□□ 1.41
PKD1-215ENST00000483558 RASSF7Q02833 373 aa23.86■■□□□ 1.41
PKD1-215ENST00000483558 HSP90AB2PQ58FF8 381 aa23.85■■□□□ 1.41
PKD1-215ENST00000483558 PCDH10Q9P2E7 1040 aa23.85■■□□□ 1.41
PKD1-215ENST00000483558 TMOD3Q9NYL9 352 aa23.84■■□□□ 1.41
PKD1-215ENST00000483558 CCDC88AQ3V6T2 1871 aa23.83■■□□□ 1.41
PKD1-215ENST00000483558 GLTPD2A6NH11 291 aa23.82■■□□□ 1.4
PKD1-215ENST00000483558 RFC4P35249 363 aa23.82■■□□□ 1.4
PKD1-215ENST00000483558 ATG3Q9NT62 314 aa23.82■■□□□ 1.4
PKD1-215ENST00000483558 SMG6Q86US8 1419 aaKnown RBP23.81■■□□□ 1.4
PKD1-215ENST00000483558 NKX1-1Q15270 411 aaPredicted RBP23.8■■□□□ 1.4
PKD1-215ENST00000483558 PRDM10Q9NQV6 1147 aa23.8■■□□□ 1.4
PKD1-215ENST00000483558 RTL1A6NKG5 1358 aa23.79■■□□□ 1.4
PKD1-215ENST00000483558 SLC4A9Q96Q91 983 aa23.79■■□□□ 1.4
PKD1-215ENST00000483558 POTECB2RU33 542 aa23.78■■□□□ 1.4
PKD1-215ENST00000483558 RBM42Q9BTD8 480 aaKnown RBP23.78■■□□□ 1.4
PKD1-215ENST00000483558 DDR1Q08345 913 aa23.76■■□□□ 1.39
PKD1-215ENST00000483558 SIN3AQ96ST3 1273 aa23.76■■□□□ 1.39
PKD1-215ENST00000483558 GGNBP2Q9H3C7 697 aa23.76■■□□□ 1.39
PKD1-215ENST00000483558 SRP68Q9UHB9 627 aaKnown RBP23.76■■□□□ 1.39
PKD1-215ENST00000483558 CREBZFQ9NS37 354 aa23.75■■□□□ 1.39
PKD1-215ENST00000483558 MYH14Q7Z406 1995 aaKnown RBP23.74■■□□□ 1.39
PKD1-215ENST00000483558 RPS6KA4O75676 772 aa23.74■■□□□ 1.39
PKD1-215ENST00000483558 LMNB1P20700 586 aa23.74■■□□□ 1.39
PKD1-215ENST00000483558 CTCFP49711 727 aaPredicted RBP23.74■■□□□ 1.39
PKD1-215ENST00000483558 LBX1P52954 281 aa23.74■■□□□ 1.39
PKD1-215ENST00000483558 FKBP8Q14318 412 aa23.74■■□□□ 1.39
PKD1-215ENST00000483558 ABHD8Q96I13 439 aa23.74■■□□□ 1.39
PKD1-215ENST00000483558 SPG7Q9UQ90 795 aa23.74■■□□□ 1.39
PKD1-215ENST00000483558 ADRA2BP18089 450 aa23.73■■□□□ 1.39
PKD1-215ENST00000483558 AIDAQ96BJ3 306 aa23.73■■□□□ 1.39
PKD1-215ENST00000483558 INSRP06213 1382 aa23.73■■□□□ 1.39
PKD1-215ENST00000483558 RC3H1Q5TC82 1133 aaKnown RBP23.72■■□□□ 1.39
PKD1-215ENST00000483558 ZC3H4Q9UPT8 1303 aaKnown RBP23.71■■□□□ 1.39
PKD1-215ENST00000483558 NEUROD1Q13562 356 aa23.71■■□□□ 1.39
PKD1-215ENST00000483558 KDM6AO15550 1401 aaPredicted RBP23.7■■□□□ 1.38
PKD1-215ENST00000483558 FYB1O15117 783 aa23.7■■□□□ 1.38
PKD1-215ENST00000483558 CARD11Q9BXL7 1154 aa23.7■■□□□ 1.38
PKD1-215ENST00000483558 POTEIP0CG38 1075 aa23.69■■□□□ 1.38
PKD1-215ENST00000483558 POTEJP0CG39 1038 aa23.69■■□□□ 1.38
PKD1-215ENST00000483558 TIAM2Q8IVF5 1701 aa23.69■■□□□ 1.38
PKD1-215ENST00000483558 KDRP35968 1356 aa23.68■■□□□ 1.38
PKD1-215ENST00000483558 VEGFBP49765 207 aa23.68■■□□□ 1.38
PKD1-215ENST00000483558 MLLT1Q03111 559 aaPredicted RBP23.68■■□□□ 1.38
PKD1-215ENST00000483558 CHADLQ6NUI6 762 aa23.68■■□□□ 1.38
PKD1-215ENST00000483558 CNTNAP1P78357 1384 aa23.67■■□□□ 1.38
PKD1-215ENST00000483558 PHKG2P15735 406 aa23.67■■□□□ 1.38
PKD1-215ENST00000483558 COL5A3P25940 1745 aaPredicted RBP23.67■■□□□ 1.38
PKD1-215ENST00000483558 CNTNAP4Q9C0A0 1308 aa23.66■■□□□ 1.38
PKD1-215ENST00000483558 CCDC85CA6NKD9 419 aa23.66■■□□□ 1.38
PKD1-215ENST00000483558 IFNL2Q8IZJ0 200 aa23.66■■□□□ 1.38
PKD1-215ENST00000483558 FLT4P35916 1363 aa23.65■■□□□ 1.38
PKD1-215ENST00000483558 POLRMTO00411 1230 aaKnown RBP23.64■■□□□ 1.37
PKD1-215ENST00000483558 DPY19L2Q6NUT2 758 aa23.64■■□□□ 1.37
PKD1-215ENST00000483558 EMILIN1Q9Y6C2 1016 aa23.64■■□□□ 1.37
PKD1-215ENST00000483558 PUS7Q96PZ0 661 aaKnown RBP23.63■■□□□ 1.37
PKD1-215ENST00000483558 WBP1LQ9NX94 342 aa23.63■■□□□ 1.37
PKD1-215ENST00000483558 NFKBIEO00221 500 aa23.62■■□□□ 1.37
PKD1-215ENST00000483558 PPM1GO15355 546 aaPredicted RBP23.62■■□□□ 1.37
PKD1-215ENST00000483558 TM4SF1P30408 202 aa23.62■■□□□ 1.37
PKD1-215ENST00000483558 USP42Q9H9J4 1324 aaKnown RBP23.61■■□□□ 1.37
PKD1-215ENST00000483558 HSPA8P11142 646 aaKnown RBP23.61■■□□□ 1.37
PKD1-215ENST00000483558 VIRMAQ69YN4 1812 aaKnown RBP23.61■■□□□ 1.37
PKD1-215ENST00000483558 CRKLP46109 303 aaKnown RBP23.6■■□□□ 1.37
PKD1-215ENST00000483558 EYA1Q99502 592 aa23.6■■□□□ 1.37
PKD1-215ENST00000483558 AFDNP55196 1824 aaKnown RBP23.59■■□□□ 1.37
PKD1-215ENST00000483558 PTCD1O75127 700 aaKnown RBP23.59■■□□□ 1.37
PKD1-215ENST00000483558 TTLL6Q8N841 843 aa23.59■■□□□ 1.37
PKD1-215ENST00000483558 ZNF219Q9P2Y4 722 aaPredicted RBP23.59■■□□□ 1.37
PKD1-215ENST00000483558 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.58■■□□□ 1.37
PKD1-215ENST00000483558 ZNF831Q5JPB2 1677 aa23.57■■□□□ 1.36
PKD1-215ENST00000483558 DDNO94850 711 aaPredicted RBP23.57■■□□□ 1.36
PKD1-215ENST00000483558 ERFEQ4G0M1 354 aa23.56■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms