RNA–Protein interactions for RNA: ENST00000482460.1

CYTH3-208, Transcript of cytohesin 3, humanhuman

TSL 3

Gene CYTH3, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYTH3-208ENST00000482460 AK7Q96M32 723 aa30.7■■■□□ 2.51
CYTH3-208ENST00000482460 ATP6V1AP38606 617 aa30.69■■■□□ 2.5
CYTH3-208ENST00000482460 LINC00116Q8NCU8 138 aa30.68■■■□□ 2.5
CYTH3-208ENST00000482460 MAP3K5Q99683 1374 aa30.67■■■□□ 2.5
CYTH3-208ENST00000482460 ITPK1Q13572 414 aa30.66■■■□□ 2.5
CYTH3-208ENST00000482460 AKAP4Q5JQC9 854 aa30.66■■■□□ 2.5
CYTH3-208ENST00000482460 UBR3Q6ZT12 1888 aa30.65■■■□□ 2.5
CYTH3-208ENST00000482460 COL3A1P02461 1466 aaPredicted RBP30.64■■■□□ 2.5
CYTH3-208ENST00000482460 NFATC2IPQ8NCF5 419 aa30.63■■■□□ 2.49
CYTH3-208ENST00000482460 RBM42Q9BTD8 480 aaKnown RBP30.63■■■□□ 2.49
CYTH3-208ENST00000482460 SCN11AQ9UI33 1791 aa30.63■■■□□ 2.49
CYTH3-208ENST00000482460 AMIGO3Q86WK7 504 aa30.62■■■□□ 2.49
CYTH3-208ENST00000482460 ZNF831Q5JPB2 1677 aa30.62■■■□□ 2.49
CYTH3-208ENST00000482460 SSFA2P28290 1259 aa30.61■■■□□ 2.49
CYTH3-208ENST00000482460 SLC4A9Q96Q91 983 aa30.61■■■□□ 2.49
CYTH3-208ENST00000482460 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP30.6■■■□□ 2.49
CYTH3-208ENST00000482460 PHF14O94880 888 aa30.6■■■□□ 2.49
CYTH3-208ENST00000482460 U2SURPO15042 1029 aaKnown RBP30.59■■■□□ 2.49
CYTH3-208ENST00000482460 MTHFSDQ2M296 383 aaKnown RBP30.59■■■□□ 2.49
CYTH3-208ENST00000482460 MSL1Q68DK7 614 aa30.59■■■□□ 2.49
CYTH3-208ENST00000482460 SMIM5Q71RC9 77 aa30.58■■■□□ 2.49
CYTH3-208ENST00000482460 CFAP53Q96M91 514 aa30.58■■■□□ 2.49
CYTH3-208ENST00000482460 GNPATO15228 680 aa30.57■■■□□ 2.48
CYTH3-208ENST00000482460 KLHL34Q8N239 644 aa30.57■■■□□ 2.48
CYTH3-208ENST00000482460 LGR6Q9HBX8 967 aa30.57■■■□□ 2.48
CYTH3-208ENST00000482460 RNMTO43148 476 aaKnown RBP30.56■■■□□ 2.48
CYTH3-208ENST00000482460 SLC52A2Q9HAB3 445 aa30.55■■■□□ 2.48
CYTH3-208ENST00000482460 PTCD1O75127 700 aaKnown RBP30.54■■■□□ 2.48
CYTH3-208ENST00000482460 PPP2R1AP30153 589 aa30.54■■■□□ 2.48
CYTH3-208ENST00000482460 RC3H1Q5TC82 1133 aaKnown RBP30.54■■■□□ 2.48
CYTH3-208ENST00000482460 VIRMAQ69YN4 1812 aaKnown RBP30.54■■■□□ 2.48
CYTH3-208ENST00000482460 YY1P25490 414 aa30.52■■■□□ 2.48
CYTH3-208ENST00000482460 COL5A3P25940 1745 aaPredicted RBP30.52■■■□□ 2.48
CYTH3-208ENST00000482460 RTCBQ9Y3I0 505 aaKnown RBP30.51■■■□□ 2.47
CYTH3-208ENST00000482460 CNTNAP4Q9C0A0 1308 aa30.5■■■□□ 2.47
CYTH3-208ENST00000482460 NUDCQ9Y266 331 aa30.5■■■□□ 2.47
CYTH3-208ENST00000482460 ADAMTS7Q9UKP4 1686 aa30.49■■■□□ 2.47
CYTH3-208ENST00000482460 MRC1P22897 1456 aa30.49■■■□□ 2.47
CYTH3-208ENST00000482460 TRAPPC3LQ5T215 181 aa30.48■■■□□ 2.47
CYTH3-208ENST00000482460 GAS2L2Q8NHY3 880 aa30.48■■■□□ 2.47
CYTH3-208ENST00000482460 RPS6KA4O75676 772 aa30.47■■■□□ 2.47
CYTH3-208ENST00000482460 NLGN2Q8NFZ4 835 aa30.47■■■□□ 2.47
CYTH3-208ENST00000482460 MYH14Q7Z406 1995 aaKnown RBP30.46■■■□□ 2.47
CYTH3-208ENST00000482460 ADRA2BP18089 450 aa30.46■■■□□ 2.47
CYTH3-208ENST00000482460 GPR162Q16538 588 aa30.45■■■□□ 2.47
CYTH3-208ENST00000482460 GNAT3A8MTJ3 354 aa30.44■■■□□ 2.46
CYTH3-208ENST00000482460 RSPH6AQ9H0K4 717 aa30.44■■■□□ 2.46
CYTH3-208ENST00000482460 CD2APQ9Y5K6 639 aa30.44■■■□□ 2.46
CYTH3-208ENST00000482460 CICQ96RK0 1608 aaPredicted RBP30.44■■■□□ 2.46
CYTH3-208ENST00000482460 PRKAR2BP31323 418 aa30.43■■■□□ 2.46
CYTH3-208ENST00000482460 CRKLP46109 303 aaKnown RBP30.43■■■□□ 2.46
CYTH3-208ENST00000482460 SLC39A6Q13433 755 aa30.43■■■□□ 2.46
CYTH3-208ENST00000482460 ARHGEF1Q92888 912 aaKnown RBP30.43■■■□□ 2.46
CYTH3-208ENST00000482460 TJP1Q07157 1748 aa30.42■■■□□ 2.46
CYTH3-208ENST00000482460 U2AF1L5P0DN76 240 aaPredicted RBP30.41■■■□□ 2.46
CYTH3-208ENST00000482460 U2AF1Q01081 240 aaKnown RBP eCLIP30.41■■■□□ 2.46
CYTH3-208ENST00000482460 PHACTR3Q96KR7 559 aa30.41■■■□□ 2.46
CYTH3-208ENST00000482460 IL17REQ8NFR9 667 aa30.4■■■□□ 2.46
CYTH3-208ENST00000482460 RFC4P35249 363 aa30.39■■■□□ 2.46
CYTH3-208ENST00000482460 CHD4Q14839 1912 aa30.39■■■□□ 2.46
CYTH3-208ENST00000482460 UTRNP46939 3433 aa30.38■■■□□ 2.45
CYTH3-208ENST00000482460 FCHSD2O94868 740 aa30.38■■■□□ 2.45
CYTH3-208ENST00000482460 DNAJC10Q8IXB1 793 aa30.38■■■□□ 2.45
CYTH3-208ENST00000482460 PELP1Q8IZL8 1130 aaKnown RBP30.38■■■□□ 2.45
CYTH3-208ENST00000482460 NLGN1Q8N2Q7 840 aa30.38■■■□□ 2.45
CYTH3-208ENST00000482460 TEFQ10587 303 aa30.37■■■□□ 2.45
CYTH3-208ENST00000482460 INTS5Q6P9B9 1019 aaKnown RBP30.36■■■□□ 2.45
CYTH3-208ENST00000482460 KCPQ6ZWJ8 1503 aa30.36■■■□□ 2.45
CYTH3-208ENST00000482460 MMP10P09238 476 aa30.35■■■□□ 2.45
CYTH3-208ENST00000482460 VSIG10Q8N0Z9 540 aa30.35■■■□□ 2.45
CYTH3-208ENST00000482460 GYS1P13807 737 aa30.34■■■□□ 2.45
CYTH3-208ENST00000482460 CYP19A1P11511 503 aaPredicted RBP30.33■■■□□ 2.45
CYTH3-208ENST00000482460 TTC5Q8N0Z6 440 aa30.33■■■□□ 2.45
CYTH3-208ENST00000482460 CCDC87Q9NVE4 849 aa30.33■■■□□ 2.45
CYTH3-208ENST00000482460 C4AP0C0L4 1744 aa30.33■■■□□ 2.45
CYTH3-208ENST00000482460 CEMIPQ8WUJ3 1361 aa30.32■■■□□ 2.44
CYTH3-208ENST00000482460 UBR2Q8IWV8 1755 aa30.32■■■□□ 2.44
CYTH3-208ENST00000482460 SIPA1L3O60292 1781 aaPredicted RBP30.31■■■□□ 2.44
CYTH3-208ENST00000482460 GOLGB1Q14789 3259 aaKnown RBP30.3■■■□□ 2.44
CYTH3-208ENST00000482460 YBX3P16989 372 aaKnown RBP eCLIP30.3■■■□□ 2.44
CYTH3-208ENST00000482460 ZNF790Q6PG37 636 aa30.3■■■□□ 2.44
CYTH3-208ENST00000482460 GRIN3BO60391 1043 aa30.29■■■□□ 2.44
CYTH3-208ENST00000482460 USP42Q9H9J4 1324 aaKnown RBP30.27■■■□□ 2.44
CYTH3-208ENST00000482460 DDX10Q13206 875 aaKnown RBP30.27■■■□□ 2.44
CYTH3-208ENST00000482460 SRP68Q9UHB9 627 aaKnown RBP30.27■■■□□ 2.44
CYTH3-208ENST00000482460 SOS1Q07889 1333 aaPredicted RBP30.26■■■□□ 2.44
CYTH3-208ENST00000482460 RTF1Q92541 710 aaKnown RBP30.26■■■□□ 2.43
CYTH3-208ENST00000482460 ZNF496Q96IT1 587 aaPredicted RBP30.26■■■□□ 2.43
CYTH3-208ENST00000482460 RALBP1Q15311 655 aa30.25■■■□□ 2.43
CYTH3-208ENST00000482460 PARP3Q9Y6F1 533 aa30.25■■■□□ 2.43
CYTH3-208ENST00000482460 STARD3NLO95772 234 aa30.24■■■□□ 2.43
CYTH3-208ENST00000482460 ZBTB1Q9Y2K1 713 aa30.24■■■□□ 2.43
CYTH3-208ENST00000482460 HEG1Q9ULI3 1381 aa30.24■■■□□ 2.43
CYTH3-208ENST00000482460 BTBD11A6QL63 1104 aa30.23■■■□□ 2.43
CYTH3-208ENST00000482460 HTATSF1O43719 755 aaKnown RBP30.23■■■□□ 2.43
CYTH3-208ENST00000482460 TEX13AQ9BXU3 409 aaPredicted RBP30.23■■■□□ 2.43
CYTH3-208ENST00000482460 KIF13BQ9NQT8 1826 aa30.23■■■□□ 2.43
CYTH3-208ENST00000482460 ZPR1O75312 459 aa30.22■■■□□ 2.43
CYTH3-208ENST00000482460 NEFMP07197 916 aa30.22■■■□□ 2.43
CYTH3-208ENST00000482460 FKBP8Q14318 412 aa30.22■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms