RNA–Protein interactions for RNA: ENST00000482236.5

SORT1-204, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 615 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-204ENST00000482236 NEFMP07197 916 aa15.04■□□□□ -0
SORT1-204ENST00000482236 AKAP4Q5JQC9 854 aa15.04■□□□□ -0
SORT1-204ENST00000482236 KDRP35968 1356 aa15.03■□□□□ -0
SORT1-204ENST00000482236 PTCD1O75127 700 aaKnown RBP15.03■□□□□ -0
SORT1-204ENST00000482236 COL23A1Q86Y22 540 aaPredicted RBP15.03■□□□□ -0
SORT1-204ENST00000482236 ATG3Q9NT62 314 aa15.03■□□□□ -0
SORT1-204ENST00000482236 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.02■□□□□ -0
SORT1-204ENST00000482236 LINC00116Q8NCU8 138 aa15.02■□□□□ -0
SORT1-204ENST00000482236 C4BP0C0L5 1744 aa15.02□□□□□ -0.01
SORT1-204ENST00000482236 KDM6AO15550 1401 aaPredicted RBP15.01□□□□□ -0.01
SORT1-204ENST00000482236 U2AF1L5P0DN76 240 aaPredicted RBP15.01□□□□□ -0.01
SORT1-204ENST00000482236 U2AF1Q01081 240 aaKnown RBP eCLIP15.01□□□□□ -0.01
SORT1-204ENST00000482236 GPR162Q16538 588 aa15.01□□□□□ -0.01
SORT1-204ENST00000482236 NFATC2IPQ8NCF5 419 aa15.01□□□□□ -0.01
SORT1-204ENST00000482236 GAS2L2Q8NHY3 880 aa15.01□□□□□ -0.01
SORT1-204ENST00000482236 SYT17Q9BSW7 474 aa15.01□□□□□ -0.01
SORT1-204ENST00000482236 QSER1Q2KHR3 1735 aa15□□□□□ -0.01
SORT1-204ENST00000482236 YY1P25490 414 aa15□□□□□ -0.01
SORT1-204ENST00000482236 SSFA2P28290 1259 aa15□□□□□ -0.01
SORT1-204ENST00000482236 TTC5Q8N0Z6 440 aa15□□□□□ -0.01
SORT1-204ENST00000482236 RTCBQ9Y3I0 505 aaKnown RBP15□□□□□ -0.01
SORT1-204ENST00000482236 TUBGCP6Q96RT7 1819 aa14.99□□□□□ -0.01
SORT1-204ENST00000482236 TEFQ10587 303 aa14.99□□□□□ -0.01
SORT1-204ENST00000482236 ITPK1Q13572 414 aa14.99□□□□□ -0.01
SORT1-204ENST00000482236 PPP2R1AP30153 589 aa14.98□□□□□ -0.01
SORT1-204ENST00000482236 MTHFSDQ2M296 383 aaKnown RBP14.98□□□□□ -0.01
SORT1-204ENST00000482236 SLC52A2Q9HAB3 445 aa14.98□□□□□ -0.01
SORT1-204ENST00000482236 RNMTO43148 476 aaKnown RBP14.97□□□□□ -0.01
SORT1-204ENST00000482236 PRKAR2BP31323 418 aa14.97□□□□□ -0.01
SORT1-204ENST00000482236 RFC4P35249 363 aa14.97□□□□□ -0.01
SORT1-204ENST00000482236 TRAPPC3LQ5T215 181 aa14.97□□□□□ -0.01
SORT1-204ENST00000482236 SGIP1Q9BQI5 828 aa14.97□□□□□ -0.01
SORT1-204ENST00000482236 MAP3K5Q99683 1374 aa14.97□□□□□ -0.01
SORT1-204ENST00000482236 GNAT3A8MTJ3 354 aa14.96□□□□□ -0.01
SORT1-204ENST00000482236 SMIM5Q71RC9 77 aa14.96□□□□□ -0.01
SORT1-204ENST00000482236 RTF1Q92541 710 aaKnown RBP14.96□□□□□ -0.01
SORT1-204ENST00000482236 COL3A1P02461 1466 aaPredicted RBP14.95□□□□□ -0.02
SORT1-204ENST00000482236 TAF1LQ8IZX4 1826 aa14.95□□□□□ -0.02
SORT1-204ENST00000482236 NPM2Q86SE8 214 aaKnown RBP14.95□□□□□ -0.02
SORT1-204ENST00000482236 LGR6Q9HBX8 967 aa14.94□□□□□ -0.02
SORT1-204ENST00000482236 CNTNAP4Q9C0A0 1308 aa14.93□□□□□ -0.02
SORT1-204ENST00000482236 ADRA2BP18089 450 aa14.93□□□□□ -0.02
SORT1-204ENST00000482236 CRKLP46109 303 aaKnown RBP14.93□□□□□ -0.02
SORT1-204ENST00000482236 SLC39A6Q13433 755 aa14.93□□□□□ -0.02
SORT1-204ENST00000482236 MAPK8IP3Q9UPT6 1336 aa14.92□□□□□ -0.02
SORT1-204ENST00000482236 DDX10Q13206 875 aaKnown RBP14.92□□□□□ -0.02
SORT1-204ENST00000482236 NLGN2Q8NFZ4 835 aa14.92□□□□□ -0.02
SORT1-204ENST00000482236 ZNF330Q9Y3S2 320 aaPredicted RBP14.92□□□□□ -0.02
SORT1-204ENST00000482236 MMP10P09238 476 aa14.91□□□□□ -0.02
SORT1-204ENST00000482236 AMIGO3Q86WK7 504 aa14.91□□□□□ -0.02
SORT1-204ENST00000482236 SCN11AQ9UI33 1791 aa14.9□□□□□ -0.02
SORT1-204ENST00000482236 ZPR1O75312 459 aa14.9□□□□□ -0.02
SORT1-204ENST00000482236 RPS6KA4O75676 772 aa14.9□□□□□ -0.02
SORT1-204ENST00000482236 RC3H1Q5TC82 1133 aaKnown RBP14.9□□□□□ -0.02
SORT1-204ENST00000482236 DNAJC10Q8IXB1 793 aa14.9□□□□□ -0.02
SORT1-204ENST00000482236 NLGN1Q8N2Q7 840 aa14.9□□□□□ -0.02
SORT1-204ENST00000482236 RSPH6AQ9H0K4 717 aa14.9□□□□□ -0.02
SORT1-204ENST00000482236 PNNQ9H307 717 aaKnown RBP14.9□□□□□ -0.02
SORT1-204ENST00000482236 CCDC87Q9NVE4 849 aa14.9□□□□□ -0.02
SORT1-204ENST00000482236 WWC3Q9ULE0 1092 aa14.9□□□□□ -0.02
SORT1-204ENST00000482236 PARP3Q9Y6F1 533 aa14.9□□□□□ -0.02
SORT1-204ENST00000482236 UBR3Q6ZT12 1888 aa14.9□□□□□ -0.02
SORT1-204ENST00000482236 MRC1P22897 1456 aa14.89□□□□□ -0.03
SORT1-204ENST00000482236 STARD3NLO95772 234 aa14.89□□□□□ -0.03
SORT1-204ENST00000482236 ARHGEF1Q92888 912 aaKnown RBP14.89□□□□□ -0.03
SORT1-204ENST00000482236 SLC4A9Q96Q91 983 aa14.89□□□□□ -0.03
SORT1-204ENST00000482236 CD2APQ9Y5K6 639 aa14.89□□□□□ -0.03
SORT1-204ENST00000482236 BTBD11A6QL63 1104 aa14.88□□□□□ -0.03
SORT1-204ENST00000482236 FCHSD2O94868 740 aa14.88□□□□□ -0.03
SORT1-204ENST00000482236 ZEB1P37275 1124 aaPredicted RBP14.88□□□□□ -0.03
SORT1-204ENST00000482236 RALBP1Q15311 655 aa14.88□□□□□ -0.03
SORT1-204ENST00000482236 GRIN3BO60391 1043 aa14.87□□□□□ -0.03
SORT1-204ENST00000482236 CANXP27824 592 aaKnown RBP14.87□□□□□ -0.03
SORT1-204ENST00000482236 PHACTR3Q96KR7 559 aa14.87□□□□□ -0.03
SORT1-204ENST00000482236 FMNL2Q96PY5 1086 aa14.87□□□□□ -0.03
SORT1-204ENST00000482236 NPHP1O15259 732 aa14.86□□□□□ -0.03
SORT1-204ENST00000482236 MCM10Q7L590 875 aa14.86□□□□□ -0.03
SORT1-204ENST00000482236 ZNF831Q5JPB2 1677 aa14.85□□□□□ -0.03
SORT1-204ENST00000482236 WDR43Q15061 677 aaKnown RBP eCLIP14.85□□□□□ -0.03
SORT1-204ENST00000482236 ZNF790Q6PG37 636 aa14.85□□□□□ -0.03
SORT1-204ENST00000482236 SRP68Q9UHB9 627 aaKnown RBP14.85□□□□□ -0.03
SORT1-204ENST00000482236 COL5A3P25940 1745 aaPredicted RBP14.85□□□□□ -0.03
SORT1-204ENST00000482236 VSIG10Q8N0Z9 540 aa14.84□□□□□ -0.03
SORT1-204ENST00000482236 IL17REQ8NFR9 667 aa14.84□□□□□ -0.03
SORT1-204ENST00000482236 TEX13AQ9BXU3 409 aaPredicted RBP14.84□□□□□ -0.03
SORT1-204ENST00000482236 USP42Q9H9J4 1324 aaKnown RBP14.84□□□□□ -0.03
SORT1-204ENST00000482236 CICQ96RK0 1608 aaPredicted RBP14.84□□□□□ -0.03
SORT1-204ENST00000482236 COL15A1P39059 1388 aa14.84□□□□□ -0.03
SORT1-204ENST00000482236 TJP1Q07157 1748 aa14.83□□□□□ -0.03
SORT1-204ENST00000482236 KCPQ6ZWJ8 1503 aa14.83□□□□□ -0.04
SORT1-204ENST00000482236 A0A087WZG4 1122 aa14.83□□□□□ -0.04
SORT1-204ENST00000482236 CYP19A1P11511 503 aaPredicted RBP14.83□□□□□ -0.04
SORT1-204ENST00000482236 GYS1P13807 737 aa14.83□□□□□ -0.04
SORT1-204ENST00000482236 USPL1Q5W0Q7 1092 aa14.83□□□□□ -0.04
SORT1-204ENST00000482236 ZBTB1Q9Y2K1 713 aa14.83□□□□□ -0.04
SORT1-204ENST00000482236 MYBBP1AQ9BQG0 1328 aaKnown RBP14.83□□□□□ -0.04
SORT1-204ENST00000482236 DCTN1Q14203 1278 aa14.82□□□□□ -0.04
SORT1-204ENST00000482236 INTS5Q6P9B9 1019 aaKnown RBP14.82□□□□□ -0.04
SORT1-204ENST00000482236 ZNF496Q96IT1 587 aaPredicted RBP14.82□□□□□ -0.04
SORT1-204ENST00000482236 COL24A1Q17RW2 1714 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms