RNA–Protein interactions for RNA: ENST00000482098.1

LINC00888-203, long intergenic non-protein coding RNA 888, humanhuman

TSL 2

Gene LINC00888, Length 794 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00888-203ENST00000482098 EVX2Q03828 476 aa11.04□□□□□ -0.64
LINC00888-203ENST00000482098 BCL2L12Q9HB09 334 aa11.04□□□□□ -0.64
LINC00888-203ENST00000482098 PSDA5PKW4 1024 aaPredicted RBP11.03□□□□□ -0.64
LINC00888-203ENST00000482098 ATP9BO43861 1147 aa11.03□□□□□ -0.64
LINC00888-203ENST00000482098 TBC1D9Q6ZT07 1266 aa11.03□□□□□ -0.64
LINC00888-203ENST00000482098 METRNQ9UJH8 293 aa11.03□□□□□ -0.64
LINC00888-203ENST00000482098 RPRD2Q5VT52 1461 aaKnown RBP11.03□□□□□ -0.64
LINC00888-203ENST00000482098 C6orf229H3BNL8 230 aa11.02□□□□□ -0.65
LINC00888-203ENST00000482098 RIMBP2O15034 1052 aa11.02□□□□□ -0.65
LINC00888-203ENST00000482098 DOK7Q18PE1 504 aa11.02□□□□□ -0.65
LINC00888-203ENST00000482098 GRIPAP1Q4V328 841 aa11.02□□□□□ -0.65
LINC00888-203ENST00000482098 ARSIQ5FYB1 569 aa11.02□□□□□ -0.65
LINC00888-203ENST00000482098 SLF2Q8IX21 1173 aa11.02□□□□□ -0.65
LINC00888-203ENST00000482098 C8orf37Q96NL8 207 aa11.02□□□□□ -0.65
LINC00888-203ENST00000482098 RRP7BPQ9NSQ0 103 aa11.02□□□□□ -0.65
LINC00888-203ENST00000482098 RIMS2Q9UQ26 1411 aa11.01□□□□□ -0.65
LINC00888-203ENST00000482098 C3orf80F5H4A9 247 aa11.01□□□□□ -0.65
LINC00888-203ENST00000482098 GUCA2AQ02747 115 aa11.01□□□□□ -0.65
LINC00888-203ENST00000482098 ELOAQ14241 798 aaKnown RBP11.01□□□□□ -0.65
LINC00888-203ENST00000482098 TRPC5Q9UL62 973 aaPredicted RBP11.01□□□□□ -0.65
LINC00888-203ENST00000482098 CFAP99D6REC4 459 aa11□□□□□ -0.65
LINC00888-203ENST00000482098 ERCC3P19447 782 aa11□□□□□ -0.65
LINC00888-203ENST00000482098 EPS8L1Q8TE68 723 aa11□□□□□ -0.65
LINC00888-203ENST00000482098 USP35Q9P2H5 1018 aa11□□□□□ -0.65
LINC00888-203ENST00000482098 SIPA1L2Q9P2F8 1722 aaPredicted RBP11□□□□□ -0.65
LINC00888-203ENST00000482098 PNPLA6Q8IY17 1366 aa11□□□□□ -0.65
LINC00888-203ENST00000482098 ADAMTS13Q76LX8 1427 aa11□□□□□ -0.65
LINC00888-203ENST00000482098 ASXL1Q8IXJ9 1541 aa10.99□□□□□ -0.65
LINC00888-203ENST00000482098 RBM47A0AV96 593 aaKnown RBP10.99□□□□□ -0.65
LINC00888-203ENST00000482098 KHSRPQ92945 711 aaKnown RBP eCLIP10.99□□□□□ -0.65
LINC00888-203ENST00000482098 ZSWIM6Q9HCJ5 1215 aa10.99□□□□□ -0.65
LINC00888-203ENST00000482098 ABCC5O15440 1437 aa10.99□□□□□ -0.65
LINC00888-203ENST00000482098 SETBP1Q9Y6X0 1596 aa10.98□□□□□ -0.65
LINC00888-203ENST00000482098 SMAPO00193 183 aa10.97□□□□□ -0.65
LINC00888-203ENST00000482098 SLC4A3P48751 1232 aa10.97□□□□□ -0.65
LINC00888-203ENST00000482098 NR6A1Q15406 480 aa10.97□□□□□ -0.65
LINC00888-203ENST00000482098 HLA-CQ95604 372 aa10.97□□□□□ -0.65
LINC00888-203ENST00000482098 USP21Q9UK80 565 aa10.97□□□□□ -0.65
LINC00888-203ENST00000482098 ANKRD30AQ9BXX3 1397 aa10.97□□□□□ -0.65
LINC00888-203ENST00000482098 MST1RQ04912 1400 aa10.97□□□□□ -0.65
LINC00888-203ENST00000482098 PTCH1Q13635 1447 aa10.96□□□□□ -0.65
LINC00888-203ENST00000482098 KANK4Q5T7N3 995 aaPredicted RBP10.96□□□□□ -0.65
LINC00888-203ENST00000482098 ATRNO75882 1429 aa10.95□□□□□ -0.66
LINC00888-203ENST00000482098 GABBR2O75899 941 aa10.95□□□□□ -0.66
LINC00888-203ENST00000482098 ARID4AP29374 1257 aaPredicted RBP10.95□□□□□ -0.66
LINC00888-203ENST00000482098 TMEM164Q5U3C3 297 aa10.95□□□□□ -0.66
LINC00888-203ENST00000482098 LHX6Q9UPM6 363 aa10.95□□□□□ -0.66
LINC00888-203ENST00000482098 NHSL1Q5SYE7 1610 aa10.95□□□□□ -0.66
LINC00888-203ENST00000482098 TRPM2O94759 1503 aa10.94□□□□□ -0.66
LINC00888-203ENST00000482098 UNCXA6NJT0 531 aa10.94□□□□□ -0.66
LINC00888-203ENST00000482098 SLC10A3P09131 477 aa10.94□□□□□ -0.66
LINC00888-203ENST00000482098 HMGB1P09429 215 aaKnown RBP10.94□□□□□ -0.66
LINC00888-203ENST00000482098 NR1H3Q13133 447 aa10.94□□□□□ -0.66
LINC00888-203ENST00000482098 NFATC2IPQ8NCF5 419 aa10.94□□□□□ -0.66
LINC00888-203ENST00000482098 NOVA2Q9UNW9 492 aaKnown RBP10.94□□□□□ -0.66
LINC00888-203ENST00000482098 DAPK1P53355 1430 aa10.93□□□□□ -0.66
LINC00888-203ENST00000482098 ADAMTS2O95450 1211 aa10.93□□□□□ -0.66
LINC00888-203ENST00000482098 TMEM131LA2VDJ0 1609 aa10.93□□□□□ -0.66
LINC00888-203ENST00000482098 BLMP54132 1417 aaPredicted RBP10.92□□□□□ -0.66
LINC00888-203ENST00000482098 PTPRUQ92729 1446 aa10.92□□□□□ -0.66
LINC00888-203ENST00000482098 SOS2Q07890 1332 aaPredicted RBP10.92□□□□□ -0.66
LINC00888-203ENST00000482098 GPR153Q6NV75 609 aa10.92□□□□□ -0.66
LINC00888-203ENST00000482098 ZMIZ1Q9ULJ6 1067 aa10.92□□□□□ -0.66
LINC00888-203ENST00000482098 SWT1Q5T5J6 900 aaKnown RBP10.91□□□□□ -0.66
LINC00888-203ENST00000482098 STK32AQ8WU08 396 aa10.91□□□□□ -0.66
LINC00888-203ENST00000482098 ADGRL3Q9HAR2 1447 aa10.91□□□□□ -0.66
LINC00888-203ENST00000482098 USP17L3A6NCW0 530 aa10.9□□□□□ -0.66
LINC00888-203ENST00000482098 USP17L4A6NCW7 530 aa10.9□□□□□ -0.66
LINC00888-203ENST00000482098 USP17L2Q6R6M4 530 aa10.9□□□□□ -0.66
LINC00888-203ENST00000482098 USP17L1Q7RTZ2 530 aa10.9□□□□□ -0.66
LINC00888-203ENST00000482098 CROCC2H7BZ55 1655 aa10.89□□□□□ -0.67
LINC00888-203ENST00000482098 LRP5O75197 1615 aa10.89□□□□□ -0.67
LINC00888-203ENST00000482098 LAMC1P11047 1609 aa10.89□□□□□ -0.67
LINC00888-203ENST00000482098 PTPN23Q9H3S7 1636 aa10.89□□□□□ -0.67
LINC00888-203ENST00000482098 FUT2Q10981 343 aa10.89□□□□□ -0.67
LINC00888-203ENST00000482098 PROX2Q3B8N5 592 aa10.89□□□□□ -0.67
LINC00888-203ENST00000482098 BCL9LQ86UU0 1499 aa10.88□□□□□ -0.67
LINC00888-203ENST00000482098 PER1O15534 1290 aaPredicted RBP10.88□□□□□ -0.67
LINC00888-203ENST00000482098 SKIP12755 728 aa10.88□□□□□ -0.67
LINC00888-203ENST00000482098 SSFA2P28290 1259 aa10.88□□□□□ -0.67
LINC00888-203ENST00000482098 ATP6V1AP38606 617 aa10.88□□□□□ -0.67
LINC00888-203ENST00000482098 PLEKHM2Q8IWE5 1019 aa10.88□□□□□ -0.67
LINC00888-203ENST00000482098 DDX17Q92841 729 aaKnown RBP10.88□□□□□ -0.67
LINC00888-203ENST00000482098 SIRT1Q96EB6 747 aa10.88□□□□□ -0.67
LINC00888-203ENST00000482098 ADGRL2O95490 1459 aa10.87□□□□□ -0.67
LINC00888-203ENST00000482098 C1orf167Q5SNV9 1468 aa10.87□□□□□ -0.67
LINC00888-203ENST00000482098 ANKRD50Q9ULJ7 1429 aa10.87□□□□□ -0.67
LINC00888-203ENST00000482098 FAM196BA6NMK8 535 aa10.87□□□□□ -0.67
LINC00888-203ENST00000482098 ZBBXA8MT70 800 aa10.87□□□□□ -0.67
LINC00888-203ENST00000482098 USP17L5A8MUK1 530 aa10.87□□□□□ -0.67
LINC00888-203ENST00000482098 SF3B2Q13435 895 aaKnown RBP10.87□□□□□ -0.67
LINC00888-203ENST00000482098 PHLDB3Q6NSJ2 640 aa10.87□□□□□ -0.67
LINC00888-203ENST00000482098 LARP1Q6PKG0 1096 aaKnown RBP10.87□□□□□ -0.67
LINC00888-203ENST00000482098 MRRFQ96E11 262 aaKnown RBP10.87□□□□□ -0.67
LINC00888-203ENST00000482098 KIAA1468Q9P260 1216 aa10.87□□□□□ -0.67
LINC00888-203ENST00000482098 XRN1Q8IZH2 1706 aaKnown RBP10.87□□□□□ -0.67
LINC00888-203ENST00000482098 GCC2Q8IWJ2 1684 aa10.86□□□□□ -0.67
LINC00888-203ENST00000482098 PIK3CDO00329 1044 aa10.86□□□□□ -0.67
LINC00888-203ENST00000482098 HOXB3P14651 431 aaPredicted RBP10.86□□□□□ -0.67
LINC00888-203ENST00000482098 DESI1Q6ICB0 168 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms