RNA–Protein interactions for RNA: ENST00000480961.1

CTSA-206, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 513 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-206ENST00000480961 ANO8Q9HCE9 1232 aaPredicted RBP26.91■■□□□ 1.9
CTSA-206ENST00000480961 TEFQ10587 303 aa26.9■■□□□ 1.9
CTSA-206ENST00000480961 SLC39A6Q13433 755 aa26.9■■□□□ 1.9
CTSA-206ENST00000480961 NEUROD2Q15784 382 aa26.9■■□□□ 1.9
CTSA-206ENST00000480961 SLC27A3Q5K4L6 730 aa26.9■■□□□ 1.9
CTSA-206ENST00000480961 NBPF14Q5TI25 921 aa26.9■■□□□ 1.9
CTSA-206ENST00000480961 ITGB4P16144 1822 aa26.89■■□□□ 1.9
CTSA-206ENST00000480961 SENP3-EIF4A1A0A087X0R7 540 aa26.89■■□□□ 1.9
CTSA-206ENST00000480961 TMPOP42166 694 aaKnown RBP26.89■■□□□ 1.9
CTSA-206ENST00000480961 RIPK4P57078 832 aa26.89■■□□□ 1.9
CTSA-206ENST00000480961 RBM42Q9BTD8 480 aaKnown RBP26.89■■□□□ 1.9
CTSA-206ENST00000480961 PTCD1O75127 700 aaKnown RBP26.88■■□□□ 1.89
CTSA-206ENST00000480961 THUMPD2Q9BTF0 503 aaKnown RBP26.88■■□□□ 1.89
CTSA-206ENST00000480961 LOC102724428A0A0B4J2F2 783 aa26.87■■□□□ 1.89
CTSA-206ENST00000480961 SIK1P57059 783 aa26.87■■□□□ 1.89
CTSA-206ENST00000480961 HTATSF1O43719 755 aaKnown RBP26.86■■□□□ 1.89
CTSA-206ENST00000480961 RREB1Q92766 1687 aa26.85■■□□□ 1.89
CTSA-206ENST00000480961 CEMIPQ8WUJ3 1361 aa26.85■■□□□ 1.89
CTSA-206ENST00000480961 SLC4A9Q96Q91 983 aa26.85■■□□□ 1.89
CTSA-206ENST00000480961 STK32BQ9NY57 414 aa26.85■■□□□ 1.89
CTSA-206ENST00000480961 ZNF827Q17R98 1081 aa26.84■■□□□ 1.89
CTSA-206ENST00000480961 FAM9BQ8IZU0 186 aa26.84■■□□□ 1.89
CTSA-206ENST00000480961 NUP188Q5SRE5 1749 aa26.84■■□□□ 1.89
CTSA-206ENST00000480961 RGPD3A6NKT7 1758 aaPredicted RBP26.84■■□□□ 1.89
CTSA-206ENST00000480961 RGPD4Q7Z3J3 1758 aa26.84■■□□□ 1.89
CTSA-206ENST00000480961 MRC1P22897 1456 aa26.83■■□□□ 1.89
CTSA-206ENST00000480961 APAF1O14727 1248 aa26.83■■□□□ 1.89
CTSA-206ENST00000480961 ATP6V1AP38606 617 aa26.83■■□□□ 1.89
CTSA-206ENST00000480961 ITPK1Q13572 414 aa26.83■■□□□ 1.89
CTSA-206ENST00000480961 SCN11AQ9UI33 1791 aa26.83■■□□□ 1.89
CTSA-206ENST00000480961 SLC15A2Q16348 729 aa26.82■■□□□ 1.88
CTSA-206ENST00000480961 BTBD11A6QL63 1104 aa26.81■■□□□ 1.88
CTSA-206ENST00000480961 KCNQ3O43525 872 aa26.81■■□□□ 1.88
CTSA-206ENST00000480961 MIER1Q8N108 512 aa26.81■■□□□ 1.88
CTSA-206ENST00000480961 MIS18AQ9NYP9 233 aa26.81■■□□□ 1.88
CTSA-206ENST00000480961 ADAMTS7Q9UKP4 1686 aa26.81■■□□□ 1.88
CTSA-206ENST00000480961 LINC00116Q8NCU8 138 aa26.8■■□□□ 1.88
CTSA-206ENST00000480961 AKT1S1Q96B36 256 aa26.8■■□□□ 1.88
CTSA-206ENST00000480961 PDGFDQ9GZP0 370 aaPredicted RBP26.78■■□□□ 1.88
CTSA-206ENST00000480961 TRIM35Q9UPQ4 493 aa26.78■■□□□ 1.88
CTSA-206ENST00000480961 LY75O60449 1722 aa26.77■■□□□ 1.88
CTSA-206ENST00000480961 TAF7Q15545 349 aaPredicted RBP26.77■■□□□ 1.88
CTSA-206ENST00000480961 ZNF790Q6PG37 636 aa26.77■■□□□ 1.88
CTSA-206ENST00000480961 TTC5Q8N0Z6 440 aa26.77■■□□□ 1.88
CTSA-206ENST00000480961 TFCP2L1Q9NZI6 479 aa26.76■■□□□ 1.87
CTSA-206ENST00000480961 LMOD3Q0VAK6 560 aa26.75■■□□□ 1.87
CTSA-206ENST00000480961 SMIM5Q71RC9 77 aa26.75■■□□□ 1.87
CTSA-206ENST00000480961 ZNF496Q96IT1 587 aaPredicted RBP26.75■■□□□ 1.87
CTSA-206ENST00000480961 SRCAPQ6ZRS2 3230 aa26.73■■□□□ 1.87
CTSA-206ENST00000480961 CCER2I3L3R5 266 aa26.73■■□□□ 1.87
CTSA-206ENST00000480961 DNAJC10Q8IXB1 793 aa26.73■■□□□ 1.87
CTSA-206ENST00000480961 PAPPAQ13219 1627 aa26.72■■□□□ 1.87
CTSA-206ENST00000480961 AK7Q96M32 723 aa26.72■■□□□ 1.87
CTSA-206ENST00000480961 AMIGO3Q86WK7 504 aa26.71■■□□□ 1.87
CTSA-206ENST00000480961 SALL2Q9Y467 1007 aaPredicted RBP26.71■■□□□ 1.87
CTSA-206ENST00000480961 KCPQ6ZWJ8 1503 aa26.7■■□□□ 1.87
CTSA-206ENST00000480961 LAS1LQ9Y4W2 734 aaKnown RBP26.69■■□□□ 1.86
CTSA-206ENST00000480961 DLG5Q8TDM6 1919 aa26.69■■□□□ 1.86
CTSA-206ENST00000480961 PNPLA7Q6ZV29 1317 aa26.68■■□□□ 1.86
CTSA-206ENST00000480961 PHF14O94880 888 aa26.68■■□□□ 1.86
CTSA-206ENST00000480961 FMNL2Q96PY5 1086 aa26.68■■□□□ 1.86
CTSA-206ENST00000480961 VIRMAQ69YN4 1812 aaKnown RBP26.67■■□□□ 1.86
CTSA-206ENST00000480961 GNPATO15228 680 aa26.67■■□□□ 1.86
CTSA-206ENST00000480961 MSH5O43196 834 aa26.67■■□□□ 1.86
CTSA-206ENST00000480961 TSPYL4Q9UJ04 414 aa26.67■■□□□ 1.86
CTSA-206ENST00000480961 HEG1Q9ULI3 1381 aa26.66■■□□□ 1.86
CTSA-206ENST00000480961 PRAMEF22A3QJZ6 481 aa26.65■■□□□ 1.86
CTSA-206ENST00000480961 ZBTB7AO95365 584 aa26.65■■□□□ 1.86
CTSA-206ENST00000480961 CRKLP46109 303 aaKnown RBP26.65■■□□□ 1.86
CTSA-206ENST00000480961 COL23A1Q86Y22 540 aaPredicted RBP26.65■■□□□ 1.86
CTSA-206ENST00000480961 VSIG10Q8N0Z9 540 aa26.65■■□□□ 1.86
CTSA-206ENST00000480961 SIPA1L3O60292 1781 aaPredicted RBP26.65■■□□□ 1.86
CTSA-206ENST00000480961 CYP19A1P11511 503 aaPredicted RBP26.64■■□□□ 1.86
CTSA-206ENST00000480961 HMGB2P26583 209 aaKnown RBP26.64■■□□□ 1.86
CTSA-206ENST00000480961 C5P01031 1676 aa26.63■■□□□ 1.85
CTSA-206ENST00000480961 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP26.63■■□□□ 1.85
CTSA-206ENST00000480961 RC3H1Q5TC82 1133 aaKnown RBP26.63■■□□□ 1.85
CTSA-206ENST00000480961 INTS5Q6P9B9 1019 aaKnown RBP26.63■■□□□ 1.85
CTSA-206ENST00000480961 C4BP0C0L5 1744 aa26.62■■□□□ 1.85
CTSA-206ENST00000480961 ATF5Q9Y2D1 282 aaPredicted RBP26.62■■□□□ 1.85
CTSA-206ENST00000480961 CNTNAP4Q9C0A0 1308 aa26.62■■□□□ 1.85
CTSA-206ENST00000480961 EIF4A1P60842 406 aaKnown RBP26.61■■□□□ 1.85
CTSA-206ENST00000480961 CHL1O00533 1208 aa26.6■■□□□ 1.85
CTSA-206ENST00000480961 SNRPA1P09661 255 aaKnown RBP26.6■■□□□ 1.85
CTSA-206ENST00000480961 CCDC87Q9NVE4 849 aa26.6■■□□□ 1.85
CTSA-206ENST00000480961 RTCBQ9Y3I0 505 aaKnown RBP26.6■■□□□ 1.85
CTSA-206ENST00000480961 USP16Q9Y5T5 823 aa26.6■■□□□ 1.85
CTSA-206ENST00000480961 RPS6KA4O75676 772 aa26.59■■□□□ 1.85
CTSA-206ENST00000480961 STARD3NLO95772 234 aa26.59■■□□□ 1.85
CTSA-206ENST00000480961 WWC1Q8IX03 1113 aa26.59■■□□□ 1.85
CTSA-206ENST00000480961 TAF1LQ8IZX4 1826 aa26.58■■□□□ 1.85
CTSA-206ENST00000480961 CANXP27824 592 aaKnown RBP26.58■■□□□ 1.85
CTSA-206ENST00000480961 TEX13AQ9BXU3 409 aaPredicted RBP26.58■■□□□ 1.85
CTSA-206ENST00000480961 ZBTB1Q9Y2K1 713 aa26.58■■□□□ 1.85
CTSA-206ENST00000480961 TJP1Q07157 1748 aa26.57■■□□□ 1.84
CTSA-206ENST00000480961 A1BGP04217 495 aa26.57■■□□□ 1.84
CTSA-206ENST00000480961 SSFA2P28290 1259 aa26.57■■□□□ 1.84
CTSA-206ENST00000480961 FLAD1Q8NFF5 587 aa26.57■■□□□ 1.84
CTSA-206ENST00000480961 BABAM1Q9NWV8 329 aa26.57■■□□□ 1.84
CTSA-206ENST00000480961 UBR2Q8IWV8 1755 aa26.56■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms