RNA–Protein interactions for RNA: ENST00000480525.5

HDAC6-223, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-223ENST00000480525 SOS1Q07889 1333 aaPredicted RBP6.74□□□□□ -1.33
HDAC6-223ENST00000480525 MAPK8IP3Q9UPT6 1336 aa6.74□□□□□ -1.33
HDAC6-223ENST00000480525 TUBGCP6Q96RT7 1819 aa6.73□□□□□ -1.33
HDAC6-223ENST00000480525 MYH14Q7Z406 1995 aaKnown RBP6.73□□□□□ -1.33
HDAC6-223ENST00000480525 HEG1Q9ULI3 1381 aa6.73□□□□□ -1.33
HDAC6-223ENST00000480525 RNMTO43148 476 aaKnown RBP6.73□□□□□ -1.33
HDAC6-223ENST00000480525 TRIM37O94972 964 aa6.73□□□□□ -1.33
HDAC6-223ENST00000480525 APBA3O96018 575 aa6.73□□□□□ -1.33
HDAC6-223ENST00000480525 HMOX1P09601 288 aa6.73□□□□□ -1.33
HDAC6-223ENST00000480525 CALD1Q05682 793 aaKnown RBP6.73□□□□□ -1.33
HDAC6-223ENST00000480525 DDX54Q8TDD1 881 aaKnown RBP6.73□□□□□ -1.33
HDAC6-223ENST00000480525 PALLDQ8WX93 1383 aa6.72□□□□□ -1.33
HDAC6-223ENST00000480525 PRIM1P49642 420 aaKnown RBP6.72□□□□□ -1.33
HDAC6-223ENST00000480525 TXNRD1Q16881 649 aa6.72□□□□□ -1.33
HDAC6-223ENST00000480525 RC3H1Q5TC82 1133 aaKnown RBP6.72□□□□□ -1.33
HDAC6-223ENST00000480525 FLAD1Q8NFF5 587 aa6.72□□□□□ -1.33
HDAC6-223ENST00000480525 PIGBQ92521 554 aa6.72□□□□□ -1.33
HDAC6-223ENST00000480525 PHACTR3Q96KR7 559 aa6.72□□□□□ -1.33
HDAC6-223ENST00000480525 TEX13AQ9BXU3 409 aaPredicted RBP6.72□□□□□ -1.33
HDAC6-223ENST00000480525 CHMP4AQ9BY43 222 aa6.72□□□□□ -1.33
HDAC6-223ENST00000480525 IL16Q14005 1332 aa6.72□□□□□ -1.33
HDAC6-223ENST00000480525 CNTNAP4Q9C0A0 1308 aa6.72□□□□□ -1.33
HDAC6-223ENST00000480525 KCNQ2O43526 872 aa6.71□□□□□ -1.34
HDAC6-223ENST00000480525 HOXB7P09629 217 aa6.71□□□□□ -1.34
HDAC6-223ENST00000480525 ADRA2BP18089 450 aa6.71□□□□□ -1.34
HDAC6-223ENST00000480525 TMPOP42166 694 aaKnown RBP6.71□□□□□ -1.34
HDAC6-223ENST00000480525 CABP4P57796 275 aa6.71□□□□□ -1.34
HDAC6-223ENST00000480525 NBPF14Q5TI25 921 aa6.71□□□□□ -1.34
HDAC6-223ENST00000480525 PROM2Q8N271 834 aa6.71□□□□□ -1.34
HDAC6-223ENST00000480525 IL17REQ8NFR9 667 aa6.71□□□□□ -1.34
HDAC6-223ENST00000480525 SLC16A10Q8TF71 515 aa6.71□□□□□ -1.34
HDAC6-223ENST00000480525 RTF1Q92541 710 aaKnown RBP6.71□□□□□ -1.34
HDAC6-223ENST00000480525 ADAMTS8Q9UP79 889 aa6.71□□□□□ -1.34
HDAC6-223ENST00000480525 LOC102724428A0A0B4J2F2 783 aa6.7□□□□□ -1.34
HDAC6-223ENST00000480525 SIK1P57059 783 aa6.7□□□□□ -1.34
HDAC6-223ENST00000480525 TEFQ10587 303 aa6.7□□□□□ -1.34
HDAC6-223ENST00000480525 FAM182BQ5T319 152 aa6.7□□□□□ -1.34
HDAC6-223ENST00000480525 MRS2Q9HD23 443 aa6.7□□□□□ -1.34
HDAC6-223ENST00000480525 ATG3Q9NT62 314 aa6.7□□□□□ -1.34
HDAC6-223ENST00000480525 ERBB4Q15303 1308 aa6.7□□□□□ -1.34
HDAC6-223ENST00000480525 C4AP0C0L4 1744 aa6.7□□□□□ -1.34
HDAC6-223ENST00000480525 SSFA2P28290 1259 aa6.69□□□□□ -1.34
HDAC6-223ENST00000480525 EN1Q05925 392 aaPredicted RBP6.69□□□□□ -1.34
HDAC6-223ENST00000480525 TAF7Q15545 349 aaPredicted RBP6.69□□□□□ -1.34
HDAC6-223ENST00000480525 ZNF790Q6PG37 636 aa6.69□□□□□ -1.34
HDAC6-223ENST00000480525 MPRIPQ6WCQ1 1025 aa6.69□□□□□ -1.34
HDAC6-223ENST00000480525 NFATC2IPQ8NCF5 419 aa6.69□□□□□ -1.34
HDAC6-223ENST00000480525 AKT1S1Q96B36 256 aa6.69□□□□□ -1.34
HDAC6-223ENST00000480525 BCORQ6W2J9 1755 aa6.69□□□□□ -1.34
HDAC6-223ENST00000480525 KIF13BQ9NQT8 1826 aa6.69□□□□□ -1.34
HDAC6-223ENST00000480525 SCN7AQ01118 1682 aa6.68□□□□□ -1.34
HDAC6-223ENST00000480525 ZNF853P0CG23 659 aa6.68□□□□□ -1.34
HDAC6-223ENST00000480525 EZH2Q15910 746 aaKnown RBP6.68□□□□□ -1.34
HDAC6-223ENST00000480525 SLC15A2Q16348 729 aa6.68□□□□□ -1.34
HDAC6-223ENST00000480525 DIEXFQ68CQ4 756 aaKnown RBP6.68□□□□□ -1.34
HDAC6-223ENST00000480525 DEFB132Q7Z7B7 95 aa6.68□□□□□ -1.34
HDAC6-223ENST00000480525 WDR63Q8IWG1 891 aa6.68□□□□□ -1.34
HDAC6-223ENST00000480525 CFAP44Q96MT7 982 aa6.68□□□□□ -1.34
HDAC6-223ENST00000480525 LGR6Q9HBX8 967 aa6.68□□□□□ -1.34
HDAC6-223ENST00000480525 CCNL1Q9UK58 526 aaPredicted RBP6.68□□□□□ -1.34
HDAC6-223ENST00000480525 CHL1O00533 1208 aa6.67□□□□□ -1.34
HDAC6-223ENST00000480525 RIPK4P57078 832 aa6.67□□□□□ -1.34
HDAC6-223ENST00000480525 PTF1AQ7RTS3 328 aa6.67□□□□□ -1.34
HDAC6-223ENST00000480525 TTC5Q8N0Z6 440 aa6.67□□□□□ -1.34
HDAC6-223ENST00000480525 SYTL4Q96C24 671 aaPredicted RBP6.67□□□□□ -1.34
HDAC6-223ENST00000480525 ACSBG1Q96GR2 724 aa6.67□□□□□ -1.34
HDAC6-223ENST00000480525 FMNL2Q96PY5 1086 aa6.67□□□□□ -1.34
HDAC6-223ENST00000480525 LRRC4BQ9NT99 713 aa6.67□□□□□ -1.34
HDAC6-223ENST00000480525 IFT57Q9NWB7 429 aa6.67□□□□□ -1.34
HDAC6-223ENST00000480525 STK32BQ9NY57 414 aa6.67□□□□□ -1.34
HDAC6-223ENST00000480525 ASAP1Q9ULH1 1129 aa6.67□□□□□ -1.34
HDAC6-223ENST00000480525 TRIM35Q9UPQ4 493 aa6.67□□□□□ -1.34
HDAC6-223ENST00000480525 ZNF521Q96K83 1311 aa6.67□□□□□ -1.34
HDAC6-223ENST00000480525 NRXN2Q9P2S2 1712 aa6.67□□□□□ -1.34
HDAC6-223ENST00000480525 BTBD11A6QL63 1104 aa6.66□□□□□ -1.34
HDAC6-223ENST00000480525 STARD3NLO95772 234 aa6.66□□□□□ -1.34
HDAC6-223ENST00000480525 SNRPA1P09661 255 aaKnown RBP6.66□□□□□ -1.34
HDAC6-223ENST00000480525 GNAI1P63096 354 aa6.66□□□□□ -1.34
HDAC6-223ENST00000480525 ZNF428Q96B54 188 aa6.66□□□□□ -1.34
HDAC6-223ENST00000480525 IBTKQ9P2D0 1353 aaPredicted RBP6.66□□□□□ -1.34
HDAC6-223ENST00000480525 RPS6KA4O75676 772 aa6.65□□□□□ -1.34
HDAC6-223ENST00000480525 ATP6V1AP38606 617 aa6.65□□□□□ -1.34
HDAC6-223ENST00000480525 IL6STP40189 918 aaPredicted RBP6.65□□□□□ -1.34
HDAC6-223ENST00000480525 WWC1Q8IX03 1113 aa6.65□□□□□ -1.34
HDAC6-223ENST00000480525 SLC4A9Q96Q91 983 aa6.65□□□□□ -1.34
HDAC6-223ENST00000480525 MTFR1LQ9H019 292 aa6.65□□□□□ -1.34
HDAC6-223ENST00000480525 ANKRD36CQ5JPF3 1778 aa6.64□□□□□ -1.35
HDAC6-223ENST00000480525 NUP98P52948 1817 aa6.64□□□□□ -1.35
HDAC6-223ENST00000480525 APAF1O14727 1248 aa6.64□□□□□ -1.35
HDAC6-223ENST00000480525 GIGYF1O75420 1035 aaPredicted RBP6.64□□□□□ -1.35
HDAC6-223ENST00000480525 CT47B1P0C2W7 299 aaPredicted RBP6.64□□□□□ -1.35
HDAC6-223ENST00000480525 CYP19A1P11511 503 aaPredicted RBP6.64□□□□□ -1.35
HDAC6-223ENST00000480525 EIF4A1P60842 406 aaKnown RBP6.64□□□□□ -1.35
HDAC6-223ENST00000480525 ITPK1Q13572 414 aa6.64□□□□□ -1.35
HDAC6-223ENST00000480525 CCDC184Q52MB2 194 aa6.64□□□□□ -1.35
HDAC6-223ENST00000480525 MCM10Q7L590 875 aa6.64□□□□□ -1.35
HDAC6-223ENST00000480525 ZNF496Q96IT1 587 aaPredicted RBP6.64□□□□□ -1.35
HDAC6-223ENST00000480525 ANO8Q9HCE9 1232 aaPredicted RBP6.64□□□□□ -1.35
HDAC6-223ENST00000480525 CCDC87Q9NVE4 849 aa6.64□□□□□ -1.35
HDAC6-223ENST00000480525 PNPLA7Q6ZV29 1317 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms