RNA–Protein interactions for RNA: ENST00000480102.1

PTCD3-213, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-213ENST00000480102 YTHDC2Q9H6S0 1430 aaKnown RBP7.09□□□□□ -1.28
PTCD3-213ENST00000480102 RNF223E7ERA6 249 aa7.08□□□□□ -1.28
PTCD3-213ENST00000480102 MS4A1P11836 297 aa7.08□□□□□ -1.28
PTCD3-213ENST00000480102 RNF19BQ6ZMZ0 732 aa7.08□□□□□ -1.28
PTCD3-213ENST00000480102 NUTM1Q86Y26 1132 aa7.08□□□□□ -1.28
PTCD3-213ENST00000480102 HLA-CQ95604 372 aa7.08□□□□□ -1.28
PTCD3-213ENST00000480102 SLC6A16Q9GZN6 736 aa7.08□□□□□ -1.28
PTCD3-213ENST00000480102 LAMC1P11047 1609 aa7.08□□□□□ -1.28
PTCD3-213ENST00000480102 CHD2O14647 1828 aaKnown RBP7.08□□□□□ -1.28
PTCD3-213ENST00000480102 ADGRB1O14514 1584 aa7.08□□□□□ -1.28
PTCD3-213ENST00000480102 Q3C1V9 767 aa7.07□□□□□ -1.28
PTCD3-213ENST00000480102 RGL3Q3MIN7 710 aa7.07□□□□□ -1.28
PTCD3-213ENST00000480102 BRICD5Q6PL45 260 aa7.07□□□□□ -1.28
PTCD3-213ENST00000480102 BEGAINQ9BUH8 593 aa7.07□□□□□ -1.28
PTCD3-213ENST00000480102 MST1RQ04912 1400 aa7.07□□□□□ -1.28
PTCD3-213ENST00000480102 EIF3AQ14152 1382 aaKnown RBP7.07□□□□□ -1.28
PTCD3-213ENST00000480102 GPRASP1Q5JY77 1395 aa7.07□□□□□ -1.28
PTCD3-213ENST00000480102 KIF1BO60333 1816 aa7.06□□□□□ -1.28
PTCD3-213ENST00000480102 STRCP1A6NGW2 1772 aa7.06□□□□□ -1.28
PTCD3-213ENST00000480102 GUCA2AQ02747 115 aa7.06□□□□□ -1.28
PTCD3-213ENST00000480102 NUTM2DQ5VT03 806 aaPredicted RBP7.06□□□□□ -1.28
PTCD3-213ENST00000480102 ANKLE1Q8NAG6 615 aa7.06□□□□□ -1.28
PTCD3-213ENST00000480102 SPIRE2Q8WWL2 714 aa7.06□□□□□ -1.28
PTCD3-213ENST00000480102 CDC42BPGQ6DT37 1551 aa7.06□□□□□ -1.28
PTCD3-213ENST00000480102 PPLO60437 1756 aa7.05□□□□□ -1.28
PTCD3-213ENST00000480102 AHDC1Q5TGY3 1603 aaPredicted RBP7.05□□□□□ -1.28
PTCD3-213ENST00000480102 SPATA31A6Q5VVP1 1343 aa7.05□□□□□ -1.28
PTCD3-213ENST00000480102 SETD1AO15047 1707 aaKnown RBP7.05□□□□□ -1.28
PTCD3-213ENST00000480102 ANKARQ7Z5J8 1434 aa7.05□□□□□ -1.28
PTCD3-213ENST00000480102 HSPA1LP34931 641 aa7.05□□□□□ -1.28
PTCD3-213ENST00000480102 MSS51Q4VC12 460 aa7.05□□□□□ -1.28
PTCD3-213ENST00000480102 FAM160A2Q8N612 972 aaPredicted RBP7.05□□□□□ -1.28
PTCD3-213ENST00000480102 DCAF11Q8TEB1 546 aa7.05□□□□□ -1.28
PTCD3-213ENST00000480102 PRKD2Q9BZL6 878 aa7.05□□□□□ -1.28
PTCD3-213ENST00000480102 V9GY48 417 aaPredicted RBP7.05□□□□□ -1.28
PTCD3-213ENST00000480102 ASXL1Q8IXJ9 1541 aa7.05□□□□□ -1.28
PTCD3-213ENST00000480102 IFT172Q9UG01 1749 aa7.04□□□□□ -1.28
PTCD3-213ENST00000480102 PPEF1O14829 653 aaPredicted RBP7.04□□□□□ -1.28
PTCD3-213ENST00000480102 CFAP70Q5T0N1 1121 aa7.04□□□□□ -1.28
PTCD3-213ENST00000480102 BRINP3Q76B58 766 aa7.04□□□□□ -1.28
PTCD3-213ENST00000480102 PRDM9Q9NQV7 894 aa7.04□□□□□ -1.28
PTCD3-213ENST00000480102 JCADQ9P266 1359 aa7.04□□□□□ -1.28
PTCD3-213ENST00000480102 SBNO2Q9Y2G9 1366 aa7.04□□□□□ -1.28
PTCD3-213ENST00000480102 C1orf167Q5SNV9 1468 aa7.04□□□□□ -1.28
PTCD3-213ENST00000480102 SOS2Q07890 1332 aaPredicted RBP7.03□□□□□ -1.28
PTCD3-213ENST00000480102 DIXDC1Q155Q3 683 aa7.03□□□□□ -1.28
PTCD3-213ENST00000480102 L3MBTL2Q969R5 705 aa7.03□□□□□ -1.28
PTCD3-213ENST00000480102 LRRC59Q96AG4 307 aaKnown RBP7.03□□□□□ -1.28
PTCD3-213ENST00000480102 PUS7Q96PZ0 661 aaKnown RBP7.03□□□□□ -1.28
PTCD3-213ENST00000480102 USB1Q9BQ65 265 aaKnown RBP7.03□□□□□ -1.28
PTCD3-213ENST00000480102 BRD4O60885 1362 aaPredicted RBP7.03□□□□□ -1.28
PTCD3-213ENST00000480102 NPHP3Q7Z494 1330 aa7.02□□□□□ -1.28
PTCD3-213ENST00000480102 KNDC1Q76NI1 1749 aa7.02□□□□□ -1.29
PTCD3-213ENST00000480102 MOXD2PA6NHM9 499 aa7.02□□□□□ -1.29
PTCD3-213ENST00000480102 FDX1P10109 184 aa7.02□□□□□ -1.29
PTCD3-213ENST00000480102 C14orf37Q86TY3 774 aa7.02□□□□□ -1.29
PTCD3-213ENST00000480102 EMID1Q96A84 441 aaPredicted RBP7.02□□□□□ -1.29
PTCD3-213ENST00000480102 TBC1D2Q9BYX2 928 aa7.02□□□□□ -1.29
PTCD3-213ENST00000480102 PCDHGC3Q9UN70 934 aa7.02□□□□□ -1.29
PTCD3-213ENST00000480102 ADGRB2O60241 1585 aa7.02□□□□□ -1.29
PTCD3-213ENST00000480102 CFAP65Q6ZU64 1925 aaKnown RBP7.01□□□□□ -1.29
PTCD3-213ENST00000480102 NDUFV2P19404 249 aa7.01□□□□□ -1.29
PTCD3-213ENST00000480102 PIP4K2BP78356 416 aa7.01□□□□□ -1.29
PTCD3-213ENST00000480102 PLA2G2CQ5R387 149 aa7.01□□□□□ -1.29
PTCD3-213ENST00000480102 TMEM132EQ6IEE7 984 aa7.01□□□□□ -1.29
PTCD3-213ENST00000480102 PRAM1Q96QH2 718 aa7.01□□□□□ -1.29
PTCD3-213ENST00000480102 FCF1Q9Y324 198 aaKnown RBP7.01□□□□□ -1.29
PTCD3-213ENST00000480102 MYO5BQ9ULV0 1848 aa7.01□□□□□ -1.29
PTCD3-213ENST00000480102 KIAA1210Q9ULL0 1709 aa7.01□□□□□ -1.29
PTCD3-213ENST00000480102 XIRP1Q702N8 1843 aaKnown RBP7□□□□□ -1.29
PTCD3-213ENST00000480102 GJA5P36382 358 aa7□□□□□ -1.29
PTCD3-213ENST00000480102 MMP16P51512 607 aa7□□□□□ -1.29
PTCD3-213ENST00000480102 RETREG3Q86VR2 466 aa7□□□□□ -1.29
PTCD3-213ENST00000480102 SYMPKQ92797 1274 aaKnown RBP7□□□□□ -1.29
PTCD3-213ENST00000480102 IRX2Q9BZI1 471 aaPredicted RBP7□□□□□ -1.29
PTCD3-213ENST00000480102 SIPA1L2Q9P2F8 1722 aaPredicted RBP6.99□□□□□ -1.29
PTCD3-213ENST00000480102 WASLO00401 505 aaPredicted RBP6.99□□□□□ -1.29
PTCD3-213ENST00000480102 SLC19A1P41440 591 aa6.99□□□□□ -1.29
PTCD3-213ENST00000480102 RSBN1LQ6PCB5 846 aaPredicted RBP6.99□□□□□ -1.29
PTCD3-213ENST00000480102 WAPLQ7Z5K2 1190 aa6.99□□□□□ -1.29
PTCD3-213ENST00000480102 GPBP1L1Q9HC44 474 aaPredicted RBP6.99□□□□□ -1.29
PTCD3-213ENST00000480102 SBNO1A3KN83 1393 aa6.98□□□□□ -1.29
PTCD3-213ENST00000480102 PLEKHH1Q9ULM0 1364 aa6.98□□□□□ -1.29
PTCD3-213ENST00000480102 PLEKHG3A1L390 1219 aa6.98□□□□□ -1.29
PTCD3-213ENST00000480102 C6orf229H3BNL8 230 aa6.98□□□□□ -1.29
PTCD3-213ENST00000480102 DXOO77932 396 aaKnown RBP6.98□□□□□ -1.29
PTCD3-213ENST00000480102 LIAT1Q6ZQX7 453 aa6.98□□□□□ -1.29
PTCD3-213ENST00000480102 KDM4CQ9H3R0 1056 aa6.98□□□□□ -1.29
PTCD3-213ENST00000480102 POGKQ9P215 609 aa6.98□□□□□ -1.29
PTCD3-213ENST00000480102 COL16A1Q07092 1604 aaPredicted RBP6.98□□□□□ -1.29
PTCD3-213ENST00000480102 POLR3AO14802 1390 aaPredicted RBP6.97□□□□□ -1.29
PTCD3-213ENST00000480102 TONSLQ96HA7 1378 aa6.97□□□□□ -1.29
PTCD3-213ENST00000480102 ROBO1Q9Y6N7 1651 aa6.97□□□□□ -1.29
PTCD3-213ENST00000480102 SPTLC1O15269 473 aa6.97□□□□□ -1.29
PTCD3-213ENST00000480102 PSME1Q06323 249 aa6.97□□□□□ -1.29
PTCD3-213ENST00000480102 MTMR2Q13614 643 aa6.97□□□□□ -1.29
PTCD3-213ENST00000480102 MYSM1Q5VVJ2 828 aa6.97□□□□□ -1.29
PTCD3-213ENST00000480102 SPRYD7Q5W111 196 aa6.97□□□□□ -1.29
PTCD3-213ENST00000480102 STK26Q9P289 416 aa6.97□□□□□ -1.29
PTCD3-213ENST00000480102 RALGAPBQ86X10 1494 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms