RNA–Protein interactions for RNA: ENST00000480003.5

CD46-214, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CD46, Length 1,258 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-214ENST00000480003 AMOTQ4VCS5 1084 aa12.73□□□□□ -0.37
CD46-214ENST00000480003 PLEKHO1Q53GL0 409 aaPredicted RBP12.73□□□□□ -0.37
CD46-214ENST00000480003 ZCRB1Q8TBF4 217 aaKnown RBP12.73□□□□□ -0.37
CD46-214ENST00000480003 SLC39A7Q92504 469 aa12.73□□□□□ -0.37
CD46-214ENST00000480003 RUNDC1Q96C34 613 aa12.73□□□□□ -0.37
CD46-214ENST00000480003 TTLL13PA6NNM8 815 aa12.72□□□□□ -0.37
CD46-214ENST00000480003 SEPT12Q8IYM1 358 aa12.72□□□□□ -0.37
CD46-214ENST00000480003 FAM208AQ9UK61 1670 aaKnown RBP12.72□□□□□ -0.37
CD46-214ENST00000480003 CCDC146Q8IYE0 955 aa12.71□□□□□ -0.37
CD46-214ENST00000480003 GLI3P10071 1580 aa12.71□□□□□ -0.37
CD46-214ENST00000480003 MEGF6O75095 1541 aa12.71□□□□□ -0.38
CD46-214ENST00000480003 OVOS2A0A0G2JMS6 1433 aa12.71□□□□□ -0.38
CD46-214ENST00000480003 POTEB2H3BUK9 544 aa12.7□□□□□ -0.38
CD46-214ENST00000480003 CYP27B1O15528 508 aa12.7□□□□□ -0.38
CD46-214ENST00000480003 GSE1Q14687 1217 aa12.7□□□□□ -0.38
CD46-214ENST00000480003 NKX1-1Q15270 411 aaPredicted RBP12.7□□□□□ -0.38
CD46-214ENST00000480003 DDB1Q16531 1140 aa12.7□□□□□ -0.38
CD46-214ENST00000480003 SPOCK2Q92563 424 aa12.7□□□□□ -0.38
CD46-214ENST00000480003 SPG7Q9UQ90 795 aa12.7□□□□□ -0.38
CD46-214ENST00000480003 APAF1O14727 1248 aa12.69□□□□□ -0.38
CD46-214ENST00000480003 C7P10643 843 aa12.69□□□□□ -0.38
CD46-214ENST00000480003 TMPOP42166 694 aaKnown RBP12.69□□□□□ -0.38
CD46-214ENST00000480003 MARCH10Q8NA82 808 aaPredicted RBP12.69□□□□□ -0.38
CD46-214ENST00000480003 PHKG2P15735 406 aa12.68□□□□□ -0.38
CD46-214ENST00000480003 NFE2L2Q16236 605 aa12.68□□□□□ -0.38
CD46-214ENST00000480003 AKAP4Q5JQC9 854 aa12.68□□□□□ -0.38
CD46-214ENST00000480003 IFNL2Q8IZJ0 200 aa12.68□□□□□ -0.38
CD46-214ENST00000480003 GAS2L2Q8NHY3 880 aa12.68□□□□□ -0.38
CD46-214ENST00000480003 HTATSF1O43719 755 aaKnown RBP12.67□□□□□ -0.38
CD46-214ENST00000480003 NEFMP07197 916 aa12.67□□□□□ -0.38
CD46-214ENST00000480003 ZNF530Q6P9A1 599 aaPredicted RBP12.67□□□□□ -0.38
CD46-214ENST00000480003 DDX54Q8TDD1 881 aaKnown RBP12.67□□□□□ -0.38
CD46-214ENST00000480003 RIPK4P57078 832 aa12.66□□□□□ -0.38
CD46-214ENST00000480003 PDE3BQ13370 1112 aa12.66□□□□□ -0.38
CD46-214ENST00000480003 PCDH11XQ9BZA7 1347 aa12.65□□□□□ -0.38
CD46-214ENST00000480003 PCDH11YQ9BZA8 1340 aa12.65□□□□□ -0.38
CD46-214ENST00000480003 MAPK8IP3Q9UPT6 1336 aa12.65□□□□□ -0.38
CD46-214ENST00000480003 GNAT3A8MTJ3 354 aa12.65□□□□□ -0.38
CD46-214ENST00000480003 KRT27Q7Z3Y8 459 aa12.65□□□□□ -0.38
CD46-214ENST00000480003 IL17REQ8NFR9 667 aa12.65□□□□□ -0.38
CD46-214ENST00000480003 TRIM35Q9UPQ4 493 aa12.65□□□□□ -0.38
CD46-214ENST00000480003 THSD7AQ9UPZ6 1657 aa12.64□□□□□ -0.39
CD46-214ENST00000480003 RGS12O14924 1447 aa12.64□□□□□ -0.39
CD46-214ENST00000480003 RNMTO43148 476 aaKnown RBP12.64□□□□□ -0.39
CD46-214ENST00000480003 CCDC27Q2M243 656 aa12.64□□□□□ -0.39
CD46-214ENST00000480003 NGEFQ8N5V2 710 aa12.64□□□□□ -0.39
CD46-214ENST00000480003 LGR6Q9HBX8 967 aa12.64□□□□□ -0.39
CD46-214ENST00000480003 TNS2Q63HR2 1409 aa12.63□□□□□ -0.39
CD46-214ENST00000480003 A0A0G2JS52 829 aa12.63□□□□□ -0.39
CD46-214ENST00000480003 HSP90AB1P08238 724 aaKnown RBP12.63□□□□□ -0.39
CD46-214ENST00000480003 MYT1Q01538 1121 aa12.63□□□□□ -0.39
CD46-214ENST00000480003 NEUROD2Q15784 382 aa12.63□□□□□ -0.39
CD46-214ENST00000480003 C1orf141Q5JVX7 400 aa12.63□□□□□ -0.39
CD46-214ENST00000480003 MPRIPQ6WCQ1 1025 aa12.63□□□□□ -0.39
CD46-214ENST00000480003 DCAF5Q96JK2 942 aa12.63□□□□□ -0.39
CD46-214ENST00000480003 PCDHB8Q9UN66 801 aa12.63□□□□□ -0.39
CD46-214ENST00000480003 RRP7AQ9Y3A4 280 aaKnown RBP12.63□□□□□ -0.39
CD46-214ENST00000480003 BCL9O00512 1426 aa12.62□□□□□ -0.39
CD46-214ENST00000480003 ERVV-2B6SEH9 535 aa12.62□□□□□ -0.39
CD46-214ENST00000480003 TMEM106CQ9BVX2 250 aa12.62□□□□□ -0.39
CD46-214ENST00000480003 PARP4Q9UKK3 1724 aaKnown RBP12.62□□□□□ -0.39
CD46-214ENST00000480003 DCTN1Q14203 1278 aa12.61□□□□□ -0.39
CD46-214ENST00000480003 FAM182BQ5T319 152 aa12.61□□□□□ -0.39
CD46-214ENST00000480003 FAM196AQ6ZSG2 479 aa12.61□□□□□ -0.39
CD46-214ENST00000480003 WWC1Q8IX03 1113 aa12.61□□□□□ -0.39
CD46-214ENST00000480003 PKD1L3Q7Z443 1732 aa12.6□□□□□ -0.39
CD46-214ENST00000480003 CEMIPQ8WUJ3 1361 aa12.6□□□□□ -0.39
CD46-214ENST00000480003 MAP3K5Q99683 1374 aa12.6□□□□□ -0.39
CD46-214ENST00000480003 SENP3-EIF4A1A0A087X0R7 540 aa12.6□□□□□ -0.39
CD46-214ENST00000480003 POTEFA5A3E0 1075 aa12.6□□□□□ -0.39
CD46-214ENST00000480003 MCM10Q7L590 875 aa12.6□□□□□ -0.39
CD46-214ENST00000480003 RTF1Q92541 710 aaKnown RBP12.6□□□□□ -0.39
CD46-214ENST00000480003 ZNF521Q96K83 1311 aa12.6□□□□□ -0.39
CD46-214ENST00000480003 LMOD3Q0VAK6 560 aa12.59□□□□□ -0.39
CD46-214ENST00000480003 OTUD5Q96G74 571 aa12.59□□□□□ -0.39
CD46-214ENST00000480003 KDM6AO15550 1401 aaPredicted RBP12.59□□□□□ -0.39
CD46-214ENST00000480003 WNK3Q9BYP7 1800 aa12.58□□□□□ -0.4
CD46-214ENST00000480003 KCNQ2O43526 872 aa12.58□□□□□ -0.4
CD46-214ENST00000480003 PRIM1P49642 420 aaKnown RBP12.58□□□□□ -0.4
CD46-214ENST00000480003 WDR63Q8IWG1 891 aa12.58□□□□□ -0.4
CD46-214ENST00000480003 NFATC2IPQ8NCF5 419 aa12.58□□□□□ -0.4
CD46-214ENST00000480003 SLC52A2Q9HAB3 445 aa12.58□□□□□ -0.4
CD46-214ENST00000480003 CIZ1Q9ULV3 898 aaPredicted RBP12.58□□□□□ -0.4
CD46-214ENST00000480003 SALL2Q9Y467 1007 aaPredicted RBP12.58□□□□□ -0.4
CD46-214ENST00000480003 LRRC37A3O60309 1634 aa12.58□□□□□ -0.4
CD46-214ENST00000480003 SHANK3Q9BYB0 1731 aa12.57□□□□□ -0.4
CD46-214ENST00000480003 ZNF853P0CG23 659 aa12.57□□□□□ -0.4
CD46-214ENST00000480003 POTEJP0CG39 1038 aa12.57□□□□□ -0.4
CD46-214ENST00000480003 CHRM1P11229 460 aaPredicted RBP12.57□□□□□ -0.4
CD46-214ENST00000480003 TAF7Q15545 349 aaPredicted RBP12.57□□□□□ -0.4
CD46-214ENST00000480003 PIGBQ92521 554 aa12.57□□□□□ -0.4
CD46-214ENST00000480003 ACSBG1Q96GR2 724 aa12.57□□□□□ -0.4
CD46-214ENST00000480003 THUMPD2Q9BTF0 503 aaKnown RBP12.57□□□□□ -0.4
CD46-214ENST00000480003 CABP4P57796 275 aa12.56□□□□□ -0.4
CD46-214ENST00000480003 HNRNPUQ00839 825 aaKnown RBP eCLIP12.56□□□□□ -0.4
CD46-214ENST00000480003 PTF1AQ7RTS3 328 aa12.56□□□□□ -0.4
CD46-214ENST00000480003 CCDC125Q86Z20 511 aa12.56□□□□□ -0.4
CD46-214ENST00000480003 BCL11BQ9C0K0 894 aaPredicted RBP12.56□□□□□ -0.4
CD46-214ENST00000480003 BABAM1Q9NWV8 329 aa12.56□□□□□ -0.4
CD46-214ENST00000480003 BRWD3Q6RI45 1802 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 110.2 ms