RNA–Protein interactions for RNA: ENST00000479348.2

PCIF1-202, Transcript of PDX1 C-terminal inhibiting factor 1, humanhuman

TSL 1 (best)

Gene PCIF1, Length 1,324 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCIF1-202ENST00000479348 RIPK4P57078 832 aa18.42■□□□□ 0.54
PCIF1-202ENST00000479348 EZH2Q15910 746 aaKnown RBP18.41■□□□□ 0.54
PCIF1-202ENST00000479348 SLC27A3Q5K4L6 730 aa18.4■□□□□ 0.54
PCIF1-202ENST00000479348 FAM9BQ8IZU0 186 aa18.4■□□□□ 0.54
PCIF1-202ENST00000479348 APAF1O14727 1248 aa18.39■□□□□ 0.53
PCIF1-202ENST00000479348 TXNRD1Q16881 649 aa18.39■□□□□ 0.53
PCIF1-202ENST00000479348 NCBP3Q53F19 620 aaKnown RBP18.39■□□□□ 0.53
PCIF1-202ENST00000479348 MCM10Q7L590 875 aa18.39■□□□□ 0.53
PCIF1-202ENST00000479348 ATG3Q9NT62 314 aa18.39■□□□□ 0.53
PCIF1-202ENST00000479348 ASAP1Q9ULH1 1129 aa18.39■□□□□ 0.53
PCIF1-202ENST00000479348 PALLDQ8WX93 1383 aa18.38■□□□□ 0.53
PCIF1-202ENST00000479348 PROM2Q8N271 834 aa18.38■□□□□ 0.53
PCIF1-202ENST00000479348 DLG5Q8TDM6 1919 aa18.37■□□□□ 0.53
PCIF1-202ENST00000479348 VIRMAQ69YN4 1812 aaKnown RBP18.37■□□□□ 0.53
PCIF1-202ENST00000479348 DCTN1Q14203 1278 aa18.36■□□□□ 0.53
PCIF1-202ENST00000479348 TAF7Q15545 349 aaPredicted RBP18.36■□□□□ 0.53
PCIF1-202ENST00000479348 NEUROD2Q15784 382 aa18.36■□□□□ 0.53
PCIF1-202ENST00000479348 NGEFQ8N5V2 710 aa18.36■□□□□ 0.53
PCIF1-202ENST00000479348 RRP7AQ9Y3A4 280 aaKnown RBP18.36■□□□□ 0.53
PCIF1-202ENST00000479348 LY75O60449 1722 aa18.35■□□□□ 0.53
PCIF1-202ENST00000479348 RREB1Q92766 1687 aa18.34■□□□□ 0.53
PCIF1-202ENST00000479348 CCNL1Q9UK58 526 aaPredicted RBP18.34■□□□□ 0.53
PCIF1-202ENST00000479348 TRIM35Q9UPQ4 493 aa18.34■□□□□ 0.53
PCIF1-202ENST00000479348 LOC102724428A0A0B4J2F2 783 aa18.33■□□□□ 0.53
PCIF1-202ENST00000479348 BTBD11A6QL63 1104 aa18.33■□□□□ 0.53
PCIF1-202ENST00000479348 SIK1P57059 783 aa18.33■□□□□ 0.53
PCIF1-202ENST00000479348 CCDC27Q2M243 656 aa18.33■□□□□ 0.53
PCIF1-202ENST00000479348 SIPA1L3O60292 1781 aaPredicted RBP18.32■□□□□ 0.52
PCIF1-202ENST00000479348 CALD1Q05682 793 aaKnown RBP18.32■□□□□ 0.52
PCIF1-202ENST00000479348 NBPF14Q5TI25 921 aa18.32■□□□□ 0.52
PCIF1-202ENST00000479348 ZNF790Q6PG37 636 aa18.32■□□□□ 0.52
PCIF1-202ENST00000479348 TTC5Q8N0Z6 440 aa18.32■□□□□ 0.52
PCIF1-202ENST00000479348 LRRC4BQ9NT99 713 aa18.32■□□□□ 0.52
PCIF1-202ENST00000479348 BABAM1Q9NWV8 329 aa18.32■□□□□ 0.52
PCIF1-202ENST00000479348 SLC39A6Q13433 755 aa18.31■□□□□ 0.52
PCIF1-202ENST00000479348 RBM42Q9BTD8 480 aaKnown RBP18.31■□□□□ 0.52
PCIF1-202ENST00000479348 THUMPD2Q9BTF0 503 aaKnown RBP18.31■□□□□ 0.52
PCIF1-202ENST00000479348 ZNF831Q5JPB2 1677 aa18.3■□□□□ 0.52
PCIF1-202ENST00000479348 PTCD1O75127 700 aaKnown RBP18.3■□□□□ 0.52
PCIF1-202ENST00000479348 PAPPAQ13219 1627 aa18.3■□□□□ 0.52
PCIF1-202ENST00000479348 NUP188Q5SRE5 1749 aa18.29■□□□□ 0.52
PCIF1-202ENST00000479348 ATP6V1AP38606 617 aa18.29■□□□□ 0.52
PCIF1-202ENST00000479348 VSIG10Q8N0Z9 540 aa18.29■□□□□ 0.52
PCIF1-202ENST00000479348 FMNL2Q96PY5 1086 aa18.27■□□□□ 0.52
PCIF1-202ENST00000479348 SLC4A9Q96Q91 983 aa18.27■□□□□ 0.52
PCIF1-202ENST00000479348 KCNQ4P56696 695 aa18.26■□□□□ 0.51
PCIF1-202ENST00000479348 WWC1Q8IX03 1113 aa18.26■□□□□ 0.51
PCIF1-202ENST00000479348 ZNF496Q96IT1 587 aaPredicted RBP18.26■□□□□ 0.51
PCIF1-202ENST00000479348 TEX13AQ9BXU3 409 aaPredicted RBP18.26■□□□□ 0.51
PCIF1-202ENST00000479348 STK32BQ9NY57 414 aa18.26■□□□□ 0.51
PCIF1-202ENST00000479348 KCPQ6ZWJ8 1503 aa18.26■□□□□ 0.51
PCIF1-202ENST00000479348 UBR2Q8IWV8 1755 aa18.25■□□□□ 0.51
PCIF1-202ENST00000479348 CHL1O00533 1208 aa18.25■□□□□ 0.51
PCIF1-202ENST00000479348 ITPK1Q13572 414 aa18.25■□□□□ 0.51
PCIF1-202ENST00000479348 CFAP44Q96MT7 982 aa18.25■□□□□ 0.51
PCIF1-202ENST00000479348 TSPYL4Q9UJ04 414 aa18.25■□□□□ 0.51
PCIF1-202ENST00000479348 HEG1Q9ULI3 1381 aa18.25■□□□□ 0.51
PCIF1-202ENST00000479348 SLC15A2Q16348 729 aa18.24■□□□□ 0.51
PCIF1-202ENST00000479348 RC3H1Q5TC82 1133 aaKnown RBP18.24■□□□□ 0.51
PCIF1-202ENST00000479348 AKT1S1Q96B36 256 aa18.24■□□□□ 0.51
PCIF1-202ENST00000479348 IFT57Q9NWB7 429 aa18.24■□□□□ 0.51
PCIF1-202ENST00000479348 MIS18AQ9NYP9 233 aa18.24■□□□□ 0.51
PCIF1-202ENST00000479348 IL16Q14005 1332 aa18.24■□□□□ 0.51
PCIF1-202ENST00000479348 CICQ96RK0 1608 aaPredicted RBP18.24■□□□□ 0.51
PCIF1-202ENST00000479348 KCNQ3O43525 872 aa18.23■□□□□ 0.51
PCIF1-202ENST00000479348 GNAI1P63096 354 aa18.23■□□□□ 0.51
PCIF1-202ENST00000479348 WDR63Q8IWG1 891 aa18.23■□□□□ 0.51
PCIF1-202ENST00000479348 ANO8Q9HCE9 1232 aaPredicted RBP18.23■□□□□ 0.51
PCIF1-202ENST00000479348 C5P01031 1676 aa18.23■□□□□ 0.51
PCIF1-202ENST00000479348 SNRPA1P09661 255 aaKnown RBP18.23■□□□□ 0.51
PCIF1-202ENST00000479348 ZNF853P0CG23 659 aa18.23■□□□□ 0.51
PCIF1-202ENST00000479348 LINC00116Q8NCU8 138 aa18.23■□□□□ 0.51
PCIF1-202ENST00000479348 TAF1LQ8IZX4 1826 aa18.23■□□□□ 0.51
PCIF1-202ENST00000479348 STARD3NLO95772 234 aa18.22■□□□□ 0.51
PCIF1-202ENST00000479348 EIF4A1P60842 406 aaKnown RBP18.22■□□□□ 0.51
PCIF1-202ENST00000479348 LAS1LQ9Y4W2 734 aaKnown RBP18.22■□□□□ 0.51
PCIF1-202ENST00000479348 CNTNAP4Q9C0A0 1308 aa18.21■□□□□ 0.51
PCIF1-202ENST00000479348 KDM3BQ7LBC6 1761 aa18.21■□□□□ 0.51
PCIF1-202ENST00000479348 ZNF827Q17R98 1081 aa18.21■□□□□ 0.51
PCIF1-202ENST00000479348 DNAJC10Q8IXB1 793 aa18.21■□□□□ 0.51
PCIF1-202ENST00000479348 FLAD1Q8NFF5 587 aa18.21■□□□□ 0.51
PCIF1-202ENST00000479348 AK7Q96M32 723 aa18.21■□□□□ 0.51
PCIF1-202ENST00000479348 TFCP2L1Q9NZI6 479 aa18.21■□□□□ 0.51
PCIF1-202ENST00000479348 C4BP0C0L5 1744 aa18.2■□□□□ 0.5
PCIF1-202ENST00000479348 CYP19A1P11511 503 aaPredicted RBP18.2■□□□□ 0.5
PCIF1-202ENST00000479348 R3HDM1Q15032 1099 aaKnown RBP18.2■□□□□ 0.5
PCIF1-202ENST00000479348 SALL2Q9Y467 1007 aaPredicted RBP18.2■□□□□ 0.5
PCIF1-202ENST00000479348 SENP3-EIF4A1A0A087X0R7 540 aa18.19■□□□□ 0.5
PCIF1-202ENST00000479348 CRKLP46109 303 aaKnown RBP18.19■□□□□ 0.5
PCIF1-202ENST00000479348 TJP1Q07157 1748 aa18.19■□□□□ 0.5
PCIF1-202ENST00000479348 COL5A3P25940 1745 aaPredicted RBP18.18■□□□□ 0.5
PCIF1-202ENST00000479348 GIGYF1O75420 1035 aaPredicted RBP18.18■□□□□ 0.5
PCIF1-202ENST00000479348 MBIPQ9NS73 344 aa18.18■□□□□ 0.5
PCIF1-202ENST00000479348 CCDC87Q9NVE4 849 aa18.18■□□□□ 0.5
PCIF1-202ENST00000479348 ZNF521Q96K83 1311 aa18.18■□□□□ 0.5
PCIF1-202ENST00000479348 RPS6KA4O75676 772 aa18.17■□□□□ 0.5
PCIF1-202ENST00000479348 SSFA2P28290 1259 aa18.17■□□□□ 0.5
PCIF1-202ENST00000479348 RTCBQ9Y3I0 505 aaKnown RBP18.17■□□□□ 0.5
PCIF1-202ENST00000479348 PSDA5PKW4 1024 aaPredicted RBP18.16■□□□□ 0.5
PCIF1-202ENST00000479348 GNPATO15228 680 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms