RNA–Protein interactions for RNA: ENST00000477461.1

UBR3-209, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 4

Gene UBR3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-209ENST00000477461 NUCKS1Q9H1E3 243 aaKnown RBP9.21□□□□□ -0.94
UBR3-209ENST00000477461 CHIC2Q9UKJ5 165 aa9.21□□□□□ -0.94
UBR3-209ENST00000477461 TLR1Q15399 786 aa9.2□□□□□ -0.94
UBR3-209ENST00000477461 RUBCNLQ9H714 662 aa9.2□□□□□ -0.94
UBR3-209ENST00000477461 SERTAD1Q9UHV2 236 aa9.2□□□□□ -0.94
UBR3-209ENST00000477461 ARHGEF15O94989 841 aa9.19□□□□□ -0.94
UBR3-209ENST00000477461 CELA2BP08218 269 aaPredicted RBP9.19□□□□□ -0.94
UBR3-209ENST00000477461 GDF10P55107 478 aa9.19□□□□□ -0.94
UBR3-209ENST00000477461 TRERF1Q96PN7 1200 aa9.19□□□□□ -0.94
UBR3-209ENST00000477461 MBIPQ9NS73 344 aa9.19□□□□□ -0.94
UBR3-209ENST00000477461 IGF1RP08069 1367 aa9.19□□□□□ -0.94
UBR3-209ENST00000477461 SKIP12755 728 aa9.18□□□□□ -0.94
UBR3-209ENST00000477461 MSX1P28360 303 aa9.18□□□□□ -0.94
UBR3-209ENST00000477461 MARSP56192 900 aaKnown RBP9.18□□□□□ -0.94
UBR3-209ENST00000477461 MAP7D1Q3KQU3 841 aa9.18□□□□□ -0.94
UBR3-209ENST00000477461 RAD21O60216 631 aa9.17□□□□□ -0.94
UBR3-209ENST00000477461 THBS1P07996 1170 aa9.17□□□□□ -0.94
UBR3-209ENST00000477461 MX2P20592 715 aa9.17□□□□□ -0.94
UBR3-209ENST00000477461 SOX11P35716 441 aa9.17□□□□□ -0.94
UBR3-209ENST00000477461 SCNN1DP51172 638 aa9.17□□□□□ -0.94
UBR3-209ENST00000477461 MAP3K10Q02779 954 aa9.17□□□□□ -0.94
UBR3-209ENST00000477461 A0A1B0GTH6 734 aa9.16□□□□□ -0.94
UBR3-209ENST00000477461 INHAP05111 366 aa9.16□□□□□ -0.94
UBR3-209ENST00000477461 GSK3AP49840 483 aa9.16□□□□□ -0.94
UBR3-209ENST00000477461 KCNMA1Q12791 1236 aa9.16□□□□□ -0.94
UBR3-209ENST00000477461 PPARGC1BQ86YN6 1023 aaKnown RBP9.16□□□□□ -0.94
UBR3-209ENST00000477461 AIDAQ96BJ3 306 aa9.16□□□□□ -0.94
UBR3-209ENST00000477461 ALG2Q9H553 416 aa9.16□□□□□ -0.94
UBR3-209ENST00000477461 POM121CA8CG34 1229 aa9.15□□□□□ -0.94
UBR3-209ENST00000477461 CSB-PGBD3P0DP91 1061 aa9.15□□□□□ -0.94
UBR3-209ENST00000477461 UBTFP17480 764 aaKnown RBP9.15□□□□□ -0.94
UBR3-209ENST00000477461 PLA2G4AP47712 749 aa9.15□□□□□ -0.94
UBR3-209ENST00000477461 RASSF7Q02833 373 aa9.15□□□□□ -0.94
UBR3-209ENST00000477461 DEPDC4Q8N2C3 294 aa9.15□□□□□ -0.94
UBR3-209ENST00000477461 PGBD3Q8N328 593 aa9.15□□□□□ -0.94
UBR3-209ENST00000477461 KCTD17Q8N5Z5 321 aa9.15□□□□□ -0.94
UBR3-209ENST00000477461 RHBDD1Q8TEB9 315 aa9.15□□□□□ -0.94
UBR3-209ENST00000477461 IRS1P35568 1242 aa9.14□□□□□ -0.95
UBR3-209ENST00000477461 WWC1Q8IX03 1113 aa9.14□□□□□ -0.95
UBR3-209ENST00000477461 ACDQ96AP0 544 aa9.14□□□□□ -0.95
UBR3-209ENST00000477461 TMEM229AB2RXF0 380 aa9.13□□□□□ -0.95
UBR3-209ENST00000477461 SMTNP53814 917 aa9.13□□□□□ -0.95
UBR3-209ENST00000477461 PCDHGA11Q9Y5H2 935 aa9.13□□□□□ -0.95
UBR3-209ENST00000477461 GDF11O95390 407 aa9.12□□□□□ -0.95
UBR3-209ENST00000477461 EML3Q32P44 896 aa9.12□□□□□ -0.95
UBR3-209ENST00000477461 TMEM151AQ8N4L1 468 aa9.12□□□□□ -0.95
UBR3-209ENST00000477461 NEDD1Q8NHV4 660 aa9.12□□□□□ -0.95
UBR3-209ENST00000477461 PSME1Q06323 249 aa9.11□□□□□ -0.95
UBR3-209ENST00000477461 FLIIQ13045 1269 aa9.11□□□□□ -0.95
UBR3-209ENST00000477461 NCOA4Q13772 614 aa9.11□□□□□ -0.95
UBR3-209ENST00000477461 EFHC2Q5JST6 749 aa9.11□□□□□ -0.95
UBR3-209ENST00000477461 PARP3Q9Y6F1 533 aa9.11□□□□□ -0.95
UBR3-209ENST00000477461 USP3Q9Y6I4 520 aa9.11□□□□□ -0.95
UBR3-209ENST00000477461 BCRP11274 1271 aa9.1□□□□□ -0.95
UBR3-209ENST00000477461 GTF2IP78347 998 aa9.1□□□□□ -0.95
UBR3-209ENST00000477461 HDGFL1Q5TGJ6 251 aa9.1□□□□□ -0.95
UBR3-209ENST00000477461 TBC1D9Q6ZT07 1266 aa9.1□□□□□ -0.95
UBR3-209ENST00000477461 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.1□□□□□ -0.95
UBR3-209ENST00000477461 ADAMTS19Q8TE59 1207 aa9.1□□□□□ -0.95
UBR3-209ENST00000477461 ABHD17AQ96GS6 310 aa9.1□□□□□ -0.95
UBR3-209ENST00000477461 CFHR5Q9BXR6 569 aa9.1□□□□□ -0.95
UBR3-209ENST00000477461 NIFKQ9BYG3 293 aaKnown RBP9.1□□□□□ -0.95
UBR3-209ENST00000477461 ENAMQ9NRM1 1142 aa9.1□□□□□ -0.95
UBR3-209ENST00000477461 NSFL1CQ9UNZ2 370 aaKnown RBP9.1□□□□□ -0.95
UBR3-209ENST00000477461 NOD1Q9Y239 953 aa9.1□□□□□ -0.95
UBR3-209ENST00000477461 CNTNAP5Q8WYK1 1306 aa9.09□□□□□ -0.95
UBR3-209ENST00000477461 A6NJY4 79 aa9.09□□□□□ -0.95
UBR3-209ENST00000477461 UBAP2LQ14157 1087 aaKnown RBP9.09□□□□□ -0.95
UBR3-209ENST00000477461 CABP1Q9NZU7 370 aa9.09□□□□□ -0.95
UBR3-209ENST00000477461 PHF24Q9UPV7 400 aa9.09□□□□□ -0.95
UBR3-209ENST00000477461 RNF225M0QZC1 329 aaPredicted RBP9.08□□□□□ -0.96
UBR3-209ENST00000477461 BNIP3LO60238 219 aa9.08□□□□□ -0.96
UBR3-209ENST00000477461 ARSJQ5FYB0 599 aaPredicted RBP9.08□□□□□ -0.96
UBR3-209ENST00000477461 CLUAP1Q96AJ1 413 aa9.08□□□□□ -0.96
UBR3-209ENST00000477461 SCARF2Q96GP6 870 aaPredicted RBP9.08□□□□□ -0.96
UBR3-209ENST00000477461 USP17L5A8MUK1 530 aa9.07□□□□□ -0.96
UBR3-209ENST00000477461 CTBSQ01459 385 aa9.07□□□□□ -0.96
UBR3-209ENST00000477461 KLRG1Q96E93 195 aa9.07□□□□□ -0.96
UBR3-209ENST00000477461 SLC4A9Q96Q91 983 aa9.07□□□□□ -0.96
UBR3-209ENST00000477461 OXCT2Q9BYC2 517 aaPredicted RBP9.07□□□□□ -0.96
UBR3-209ENST00000477461 CDK2AP1O14519 115 aa9.06□□□□□ -0.96
UBR3-209ENST00000477461 C2CD2LO14523 706 aa9.06□□□□□ -0.96
UBR3-209ENST00000477461 TBCELQ5QJ74 424 aa9.06□□□□□ -0.96
UBR3-209ENST00000477461 ZCCHC2Q9C0B9 1178 aaKnown RBP9.06□□□□□ -0.96
UBR3-209ENST00000477461 BMP4P12644 408 aa9.05□□□□□ -0.96
UBR3-209ENST00000477461 ATP4AP20648 1035 aa9.05□□□□□ -0.96
UBR3-209ENST00000477461 MAP2K3P46734 347 aa9.05□□□□□ -0.96
UBR3-209ENST00000477461 GALNT6Q8NCL4 622 aa9.05□□□□□ -0.96
UBR3-209ENST00000477461 ZNF358Q9NW07 568 aa9.05□□□□□ -0.96
UBR3-209ENST00000477461 IQSEC3Q9UPP2 1182 aaPredicted RBP9.05□□□□□ -0.96
UBR3-209ENST00000477461 A0A1W2PNR3 127 aa9.04□□□□□ -0.96
UBR3-209ENST00000477461 BACH1O14867 736 aa9.04□□□□□ -0.96
UBR3-209ENST00000477461 FGFR3P22607 806 aa9.04□□□□□ -0.96
UBR3-209ENST00000477461 LBRQ14739 615 aaKnown RBP9.04□□□□□ -0.96
UBR3-209ENST00000477461 MTFR1Q15390 333 aa9.04□□□□□ -0.96
UBR3-209ENST00000477461 C1orf229Q6ZS94 237 aaPredicted RBP9.04□□□□□ -0.96
UBR3-209ENST00000477461 TNS4Q8IZW8 715 aa9.04□□□□□ -0.96
UBR3-209ENST00000477461 NFATC2IPQ8NCF5 419 aa9.04□□□□□ -0.96
UBR3-209ENST00000477461 CRISPLD1Q9H336 500 aa9.04□□□□□ -0.96
UBR3-209ENST00000477461 OIP5O43482 229 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms