RNA–Protein interactions for RNA: ENST00000476842.1

SMIM4-202, Transcript of small integral membrane protein 4, humanhuman

TSL 4 BASIC

Gene SMIM4, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-202ENST00000476842 KCNQ4P56696 695 aa23.53■■□□□ 1.36
SMIM4-202ENST00000476842 TEFQ10587 303 aa23.53■■□□□ 1.36
SMIM4-202ENST00000476842 CCDC146Q8IYE0 955 aa23.53■■□□□ 1.36
SMIM4-202ENST00000476842 ITGB4P16144 1822 aa23.53■■□□□ 1.36
SMIM4-202ENST00000476842 LOC102724428A0A0B4J2F2 783 aa23.52■■□□□ 1.36
SMIM4-202ENST00000476842 SIK1P57059 783 aa23.52■■□□□ 1.36
SMIM4-202ENST00000476842 R3HDM1Q15032 1099 aaKnown RBP23.52■■□□□ 1.36
SMIM4-202ENST00000476842 TMPOP42166 694 aaKnown RBP23.51■■□□□ 1.35
SMIM4-202ENST00000476842 MCM10Q7L590 875 aa23.51■■□□□ 1.35
SMIM4-202ENST00000476842 ANO8Q9HCE9 1232 aaPredicted RBP23.51■■□□□ 1.35
SMIM4-202ENST00000476842 STK32BQ9NY57 414 aa23.51■■□□□ 1.35
SMIM4-202ENST00000476842 ADAMTS7Q9UKP4 1686 aa23.51■■□□□ 1.35
SMIM4-202ENST00000476842 MRC1P22897 1456 aa23.5■■□□□ 1.35
SMIM4-202ENST00000476842 RIPK4P57078 832 aa23.5■■□□□ 1.35
SMIM4-202ENST00000476842 DCTN1Q14203 1278 aa23.5■■□□□ 1.35
SMIM4-202ENST00000476842 SLC15A2Q16348 729 aa23.5■■□□□ 1.35
SMIM4-202ENST00000476842 PSDA5PKW4 1024 aaPredicted RBP23.49■■□□□ 1.35
SMIM4-202ENST00000476842 NUP188Q5SRE5 1749 aa23.49■■□□□ 1.35
SMIM4-202ENST00000476842 SCN11AQ9UI33 1791 aa23.49■■□□□ 1.35
SMIM4-202ENST00000476842 ATP6V1AP38606 617 aa23.48■■□□□ 1.35
SMIM4-202ENST00000476842 AKT1S1Q96B36 256 aa23.48■■□□□ 1.35
SMIM4-202ENST00000476842 RBM42Q9BTD8 480 aaKnown RBP23.48■■□□□ 1.35
SMIM4-202ENST00000476842 SLC39A6Q13433 755 aa23.47■■□□□ 1.35
SMIM4-202ENST00000476842 DIEXFQ68CQ4 756 aaKnown RBP23.47■■□□□ 1.35
SMIM4-202ENST00000476842 SLC4A9Q96Q91 983 aa23.47■■□□□ 1.35
SMIM4-202ENST00000476842 LY75O60449 1722 aa23.47■■□□□ 1.35
SMIM4-202ENST00000476842 PTCD1O75127 700 aaKnown RBP23.46■■□□□ 1.35
SMIM4-202ENST00000476842 ITPK1Q13572 414 aa23.45■■□□□ 1.34
SMIM4-202ENST00000476842 TAF7Q15545 349 aaPredicted RBP23.45■■□□□ 1.34
SMIM4-202ENST00000476842 ZNF827Q17R98 1081 aa23.45■■□□□ 1.34
SMIM4-202ENST00000476842 BTBD11A6QL63 1104 aa23.44■■□□□ 1.34
SMIM4-202ENST00000476842 LMOD3Q0VAK6 560 aa23.44■■□□□ 1.34
SMIM4-202ENST00000476842 ZNF790Q6PG37 636 aa23.44■■□□□ 1.34
SMIM4-202ENST00000476842 RRP7AQ9Y3A4 280 aaKnown RBP23.44■■□□□ 1.34
SMIM4-202ENST00000476842 NEUROD2Q15784 382 aa23.43■■□□□ 1.34
SMIM4-202ENST00000476842 TTC5Q8N0Z6 440 aa23.43■■□□□ 1.34
SMIM4-202ENST00000476842 APAF1O14727 1248 aa23.42■■□□□ 1.34
SMIM4-202ENST00000476842 LINC00116Q8NCU8 138 aa23.42■■□□□ 1.34
SMIM4-202ENST00000476842 PAPPAQ13219 1627 aa23.41■■□□□ 1.34
SMIM4-202ENST00000476842 CCER2I3L3R5 266 aa23.41■■□□□ 1.34
SMIM4-202ENST00000476842 TFCP2L1Q9NZI6 479 aa23.41■■□□□ 1.34
SMIM4-202ENST00000476842 TRIM35Q9UPQ4 493 aa23.41■■□□□ 1.34
SMIM4-202ENST00000476842 VSIG10Q8N0Z9 540 aa23.4■■□□□ 1.34
SMIM4-202ENST00000476842 THUMPD2Q9BTF0 503 aaKnown RBP23.4■■□□□ 1.34
SMIM4-202ENST00000476842 RC3H1Q5TC82 1133 aaKnown RBP23.39■■□□□ 1.33
SMIM4-202ENST00000476842 KCNQ3O43525 872 aa23.38■■□□□ 1.33
SMIM4-202ENST00000476842 FAM9BQ8IZU0 186 aa23.38■■□□□ 1.33
SMIM4-202ENST00000476842 ZNF496Q96IT1 587 aaPredicted RBP23.38■■□□□ 1.33
SMIM4-202ENST00000476842 AK7Q96M32 723 aa23.37■■□□□ 1.33
SMIM4-202ENST00000476842 FMNL2Q96PY5 1086 aa23.36■■□□□ 1.33
SMIM4-202ENST00000476842 PDGFDQ9GZP0 370 aaPredicted RBP23.36■■□□□ 1.33
SMIM4-202ENST00000476842 MIS18AQ9NYP9 233 aa23.36■■□□□ 1.33
SMIM4-202ENST00000476842 PNPLA7Q6ZV29 1317 aa23.35■■□□□ 1.33
SMIM4-202ENST00000476842 KCPQ6ZWJ8 1503 aa23.35■■□□□ 1.33
SMIM4-202ENST00000476842 DNAJC10Q8IXB1 793 aa23.35■■□□□ 1.33
SMIM4-202ENST00000476842 FLAD1Q8NFF5 587 aa23.35■■□□□ 1.33
SMIM4-202ENST00000476842 TEX13AQ9BXU3 409 aaPredicted RBP23.35■■□□□ 1.33
SMIM4-202ENST00000476842 BABAM1Q9NWV8 329 aa23.35■■□□□ 1.33
SMIM4-202ENST00000476842 NCBP3Q53F19 620 aaKnown RBP23.34■■□□□ 1.33
SMIM4-202ENST00000476842 HEG1Q9ULI3 1381 aa23.34■■□□□ 1.33
SMIM4-202ENST00000476842 ZNF831Q5JPB2 1677 aa23.34■■□□□ 1.33
SMIM4-202ENST00000476842 CNTNAP4Q9C0A0 1308 aa23.33■■□□□ 1.33
SMIM4-202ENST00000476842 VIRMAQ69YN4 1812 aaKnown RBP23.33■■□□□ 1.32
SMIM4-202ENST00000476842 SIPA1L3O60292 1781 aaPredicted RBP23.32■■□□□ 1.32
SMIM4-202ENST00000476842 DLG5Q8TDM6 1919 aa23.32■■□□□ 1.32
SMIM4-202ENST00000476842 CYP19A1P11511 503 aaPredicted RBP23.32■■□□□ 1.32
SMIM4-202ENST00000476842 MIER1Q8N108 512 aa23.32■■□□□ 1.32
SMIM4-202ENST00000476842 C5P01031 1676 aa23.32■■□□□ 1.32
SMIM4-202ENST00000476842 GNPATO15228 680 aa23.31■■□□□ 1.32
SMIM4-202ENST00000476842 RPS6KA4O75676 772 aa23.31■■□□□ 1.32
SMIM4-202ENST00000476842 SSFA2P28290 1259 aa23.31■■□□□ 1.32
SMIM4-202ENST00000476842 CRKLP46109 303 aaKnown RBP23.31■■□□□ 1.32
SMIM4-202ENST00000476842 COL23A1Q86Y22 540 aaPredicted RBP23.31■■□□□ 1.32
SMIM4-202ENST00000476842 SLC16A10Q8TF71 515 aa23.31■■□□□ 1.32
SMIM4-202ENST00000476842 STARD3NLO95772 234 aa23.3■■□□□ 1.32
SMIM4-202ENST00000476842 CCDC27Q2M243 656 aa23.3■■□□□ 1.32
SMIM4-202ENST00000476842 INTS5Q6P9B9 1019 aaKnown RBP23.3■■□□□ 1.32
SMIM4-202ENST00000476842 AMIGO3Q86WK7 504 aa23.3■■□□□ 1.32
SMIM4-202ENST00000476842 TSPYL4Q9UJ04 414 aa23.3■■□□□ 1.32
SMIM4-202ENST00000476842 RTCBQ9Y3I0 505 aaKnown RBP23.3■■□□□ 1.32
SMIM4-202ENST00000476842 C4BP0C0L5 1744 aa23.3■■□□□ 1.32
SMIM4-202ENST00000476842 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.29■■□□□ 1.32
SMIM4-202ENST00000476842 CHL1O00533 1208 aa23.29■■□□□ 1.32
SMIM4-202ENST00000476842 SNRPA1P09661 255 aaKnown RBP23.29■■□□□ 1.32
SMIM4-202ENST00000476842 EIF4A1P60842 406 aaKnown RBP23.29■■□□□ 1.32
SMIM4-202ENST00000476842 TAF1LQ8IZX4 1826 aa23.29■■□□□ 1.32
SMIM4-202ENST00000476842 CALD1Q05682 793 aaKnown RBP23.28■■□□□ 1.32
SMIM4-202ENST00000476842 CCDC87Q9NVE4 849 aa23.28■■□□□ 1.32
SMIM4-202ENST00000476842 MSH5O43196 834 aa23.27■■□□□ 1.32
SMIM4-202ENST00000476842 ZBTB7AO95365 584 aa23.27■■□□□ 1.32
SMIM4-202ENST00000476842 TRAPPC3LQ5T215 181 aa23.27■■□□□ 1.32
SMIM4-202ENST00000476842 SMIM5Q71RC9 77 aa23.27■■□□□ 1.32
SMIM4-202ENST00000476842 CFAP44Q96MT7 982 aa23.27■■□□□ 1.32
SMIM4-202ENST00000476842 MTFR1LQ9H019 292 aa23.27■■□□□ 1.32
SMIM4-202ENST00000476842 SPON1Q9HCB6 807 aa23.27■■□□□ 1.32
SMIM4-202ENST00000476842 PHF14O94880 888 aa23.26■■□□□ 1.31
SMIM4-202ENST00000476842 ADRA2BP18089 450 aa23.26■■□□□ 1.31
SMIM4-202ENST00000476842 USP16Q9Y5T5 823 aa23.26■■□□□ 1.31
SMIM4-202ENST00000476842 UBR2Q8IWV8 1755 aa23.26■■□□□ 1.31
SMIM4-202ENST00000476842 CICQ96RK0 1608 aaPredicted RBP23.26■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms