RNA–Protein interactions for RNA: ENST00000475549.1

HDAC3-207, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 297 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-207ENST00000475549 AK7Q96M32 723 aa9.62□□□□□ -0.87
HDAC3-207ENST00000475549 MTHFSP49914 203 aa9.61□□□□□ -0.87
HDAC3-207ENST00000475549 SULT6B1Q6IMI4 303 aa9.61□□□□□ -0.87
HDAC3-207ENST00000475549 KDM6AO15550 1401 aaPredicted RBP9.61□□□□□ -0.87
HDAC3-207ENST00000475549 PKD1L3Q7Z443 1732 aa9.61□□□□□ -0.87
HDAC3-207ENST00000475549 PLEKHG2Q9H7P9 1386 aa9.61□□□□□ -0.87
HDAC3-207ENST00000475549 KAT6BQ8WYB5 2073 aa9.6□□□□□ -0.87
HDAC3-207ENST00000475549 COL24A1Q17RW2 1714 aa9.6□□□□□ -0.87
HDAC3-207ENST00000475549 GNPATO15228 680 aa9.6□□□□□ -0.87
HDAC3-207ENST00000475549 SSFA2P28290 1259 aa9.6□□□□□ -0.87
HDAC3-207ENST00000475549 AMOTQ4VCS5 1084 aa9.6□□□□□ -0.87
HDAC3-207ENST00000475549 ZNF530Q6P9A1 599 aaPredicted RBP9.6□□□□□ -0.87
HDAC3-207ENST00000475549 PELP1Q8IZL8 1130 aaKnown RBP9.6□□□□□ -0.87
HDAC3-207ENST00000475549 NFATC2IPQ8NCF5 419 aa9.6□□□□□ -0.87
HDAC3-207ENST00000475549 CD2APQ9Y5K6 639 aa9.6□□□□□ -0.87
HDAC3-207ENST00000475549 KDRP35968 1356 aa9.6□□□□□ -0.87
HDAC3-207ENST00000475549 HMGB2P26583 209 aaKnown RBP9.59□□□□□ -0.87
HDAC3-207ENST00000475549 CABP4P57796 275 aa9.59□□□□□ -0.87
HDAC3-207ENST00000475549 LGR6Q9HBX8 967 aa9.59□□□□□ -0.87
HDAC3-207ENST00000475549 QSER1Q2KHR3 1735 aa9.59□□□□□ -0.87
HDAC3-207ENST00000475549 MAP2P11137 1827 aaKnown RBP9.59□□□□□ -0.88
HDAC3-207ENST00000475549 TUBGCP6Q96RT7 1819 aa9.59□□□□□ -0.88
HDAC3-207ENST00000475549 HSP90AB1P08238 724 aaKnown RBP9.58□□□□□ -0.88
HDAC3-207ENST00000475549 CC2D1BQ5T0F9 858 aaKnown RBP9.58□□□□□ -0.88
HDAC3-207ENST00000475549 ARHGEF1Q92888 912 aaKnown RBP9.58□□□□□ -0.88
HDAC3-207ENST00000475549 RBM42Q9BTD8 480 aaKnown RBP9.58□□□□□ -0.88
HDAC3-207ENST00000475549 C4BP0C0L5 1744 aa9.58□□□□□ -0.88
HDAC3-207ENST00000475549 PTCD1O75127 700 aaKnown RBP9.57□□□□□ -0.88
HDAC3-207ENST00000475549 HMOX1P09601 288 aa9.57□□□□□ -0.88
HDAC3-207ENST00000475549 TRAPPC3LQ5T215 181 aa9.57□□□□□ -0.88
HDAC3-207ENST00000475549 RC3H1Q5TC82 1133 aaKnown RBP9.57□□□□□ -0.88
HDAC3-207ENST00000475549 WWC3Q9ULE0 1092 aa9.57□□□□□ -0.88
HDAC3-207ENST00000475549 C5P01031 1676 aa9.57□□□□□ -0.88
HDAC3-207ENST00000475549 GRIN3BO60391 1043 aa9.56□□□□□ -0.88
HDAC3-207ENST00000475549 RPS6KA4O75676 772 aa9.56□□□□□ -0.88
HDAC3-207ENST00000475549 MMP10P09238 476 aa9.56□□□□□ -0.88
HDAC3-207ENST00000475549 MTHFSDQ2M296 383 aaKnown RBP9.56□□□□□ -0.88
HDAC3-207ENST00000475549 RTCBQ9Y3I0 505 aaKnown RBP9.56□□□□□ -0.88
HDAC3-207ENST00000475549 ITGB4P16144 1822 aa9.55□□□□□ -0.88
HDAC3-207ENST00000475549 GYS1P13807 737 aa9.55□□□□□ -0.88
HDAC3-207ENST00000475549 AKAP4Q5JQC9 854 aa9.55□□□□□ -0.88
HDAC3-207ENST00000475549 C1orf141Q5JVX7 400 aa9.55□□□□□ -0.88
HDAC3-207ENST00000475549 INTS5Q6P9B9 1019 aaKnown RBP9.55□□□□□ -0.88
HDAC3-207ENST00000475549 SLC52A2Q9HAB3 445 aa9.55□□□□□ -0.88
HDAC3-207ENST00000475549 CNTNAP4Q9C0A0 1308 aa9.55□□□□□ -0.88
HDAC3-207ENST00000475549 RNMTO43148 476 aaKnown RBP9.54□□□□□ -0.88
HDAC3-207ENST00000475549 DIAPH1O60610 1272 aaKnown RBP9.54□□□□□ -0.88
HDAC3-207ENST00000475549 CRKLP46109 303 aaKnown RBP9.54□□□□□ -0.88
HDAC3-207ENST00000475549 SLC39A6Q13433 755 aa9.54□□□□□ -0.88
HDAC3-207ENST00000475549 CNGB1Q14028 1251 aaPredicted RBP9.54□□□□□ -0.88
HDAC3-207ENST00000475549 NLGN1Q8N2Q7 840 aa9.54□□□□□ -0.88
HDAC3-207ENST00000475549 C1QTNF8P60827 252 aa9.53□□□□□ -0.88
HDAC3-207ENST00000475549 DNAJC10Q8IXB1 793 aa9.53□□□□□ -0.88
HDAC3-207ENST00000475549 SRP68Q9UHB9 627 aaKnown RBP9.53□□□□□ -0.88
HDAC3-207ENST00000475549 TAF1LQ8IZX4 1826 aa9.53□□□□□ -0.88
HDAC3-207ENST00000475549 NPC1L1Q9UHC9 1359 aa9.52□□□□□ -0.88
HDAC3-207ENST00000475549 A0A0G2JLW4 131 aa9.52□□□□□ -0.89
HDAC3-207ENST00000475549 KCNA3P22001 575 aa9.52□□□□□ -0.89
HDAC3-207ENST00000475549 RFC4P35249 363 aa9.52□□□□□ -0.89
HDAC3-207ENST00000475549 FKBP8Q14318 412 aa9.52□□□□□ -0.89
HDAC3-207ENST00000475549 UBR3Q6ZT12 1888 aa9.51□□□□□ -0.89
HDAC3-207ENST00000475549 CYP19A1P11511 503 aaPredicted RBP9.51□□□□□ -0.89
HDAC3-207ENST00000475549 DDR1Q08345 913 aa9.51□□□□□ -0.89
HDAC3-207ENST00000475549 IL17REQ8NFR9 667 aa9.51□□□□□ -0.89
HDAC3-207ENST00000475549 PHACTR3Q96KR7 559 aa9.51□□□□□ -0.89
HDAC3-207ENST00000475549 COL3A1P02461 1466 aaPredicted RBP9.51□□□□□ -0.89
HDAC3-207ENST00000475549 USP42Q9H9J4 1324 aaKnown RBP9.51□□□□□ -0.89
HDAC3-207ENST00000475549 DPEP1P16444 411 aa9.5□□□□□ -0.89
HDAC3-207ENST00000475549 TM4SF1P30408 202 aa9.5□□□□□ -0.89
HDAC3-207ENST00000475549 TGFB2P61812 414 aa9.5□□□□□ -0.89
HDAC3-207ENST00000475549 PXDNLA1KZ92 1463 aa9.5□□□□□ -0.89
HDAC3-207ENST00000475549 ATP10DQ9P241 1426 aa9.49□□□□□ -0.89
HDAC3-207ENST00000475549 CEP350Q5VT06 3117 aa9.49□□□□□ -0.89
HDAC3-207ENST00000475549 CCDC87Q9NVE4 849 aa9.49□□□□□ -0.89
HDAC3-207ENST00000475549 ADCY9O60503 1353 aa9.49□□□□□ -0.89
HDAC3-207ENST00000475549 C10orf71Q711Q0 1435 aa9.48□□□□□ -0.89
HDAC3-207ENST00000475549 POLRMTO00411 1230 aaKnown RBP9.48□□□□□ -0.89
HDAC3-207ENST00000475549 U2SURPO15042 1029 aaKnown RBP9.48□□□□□ -0.89
HDAC3-207ENST00000475549 GIGYF1O75420 1035 aaPredicted RBP9.48□□□□□ -0.89
HDAC3-207ENST00000475549 USPL1Q5W0Q7 1092 aa9.48□□□□□ -0.89
HDAC3-207ENST00000475549 BCL2L12Q9HB09 334 aa9.48□□□□□ -0.89
HDAC3-207ENST00000475549 RNF216Q9NWF9 866 aaPredicted RBP9.48□□□□□ -0.89
HDAC3-207ENST00000475549 ZBTB1Q9Y2K1 713 aa9.48□□□□□ -0.89
HDAC3-207ENST00000475549 PARP3Q9Y6F1 533 aa9.48□□□□□ -0.89
HDAC3-207ENST00000475549 SOS1Q07889 1333 aaPredicted RBP9.48□□□□□ -0.89
HDAC3-207ENST00000475549 ZNF831Q5JPB2 1677 aa9.48□□□□□ -0.89
HDAC3-207ENST00000475549 MRC1P22897 1456 aa9.47□□□□□ -0.89
HDAC3-207ENST00000475549 KCPQ6ZWJ8 1503 aa9.47□□□□□ -0.89
HDAC3-207ENST00000475549 KCNQ3O43525 872 aa9.47□□□□□ -0.89
HDAC3-207ENST00000475549 NPM3O75607 178 aaKnown RBP9.47□□□□□ -0.89
HDAC3-207ENST00000475549 PPP2R1AP30153 589 aa9.47□□□□□ -0.89
HDAC3-207ENST00000475549 VSIG10Q8N0Z9 540 aa9.47□□□□□ -0.89
HDAC3-207ENST00000475549 ZNF526Q8TF50 670 aaPredicted RBP9.47□□□□□ -0.89
HDAC3-207ENST00000475549 ZNF496Q96IT1 587 aaPredicted RBP9.47□□□□□ -0.89
HDAC3-207ENST00000475549 RSPH6AQ9H0K4 717 aa9.47□□□□□ -0.89
HDAC3-207ENST00000475549 BCS1LQ9Y276 419 aa9.47□□□□□ -0.89
HDAC3-207ENST00000475549 CICQ96RK0 1608 aaPredicted RBP9.46□□□□□ -0.89
HDAC3-207ENST00000475549 SENP3-EIF4A1A0A087X0R7 540 aa9.46□□□□□ -0.9
HDAC3-207ENST00000475549 GNAT3A8MTJ3 354 aa9.46□□□□□ -0.9
HDAC3-207ENST00000475549 CHRNA5P30532 468 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms