RNA–Protein interactions for RNA: ENST00000475329.5

TRAF4-210, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-210ENST00000475329 ZCRB1Q8TBF4 217 aaKnown RBP17.59■□□□□ 0.41
TRAF4-210ENST00000475329 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.58■□□□□ 0.41
TRAF4-210ENST00000475329 SLIT2O94813 1529 aa17.58■□□□□ 0.41
TRAF4-210ENST00000475329 DISP2A7MBM2 1401 aa17.58■□□□□ 0.41
TRAF4-210ENST00000475329 CYP27B1O15528 508 aa17.58■□□□□ 0.4
TRAF4-210ENST00000475329 B4GALNT3Q6L9W6 998 aa17.58■□□□□ 0.4
TRAF4-210ENST00000475329 CCDC136Q96JN2 1154 aa17.58■□□□□ 0.4
TRAF4-210ENST00000475329 BTBD11A6QL63 1104 aa17.57■□□□□ 0.4
TRAF4-210ENST00000475329 ATF7IPQ6VMQ6 1270 aa17.57■□□□□ 0.4
TRAF4-210ENST00000475329 FTSJ3Q8IY81 847 aaKnown RBP17.57■□□□□ 0.4
TRAF4-210ENST00000475329 PANK1Q8TE04 598 aa17.57■□□□□ 0.4
TRAF4-210ENST00000475329 DCAF5Q96JK2 942 aa17.57■□□□□ 0.4
TRAF4-210ENST00000475329 NOB1Q9ULX3 412 aaKnown RBP17.57■□□□□ 0.4
TRAF4-210ENST00000475329 TOGARAM1Q9Y4F4 1720 aa17.57■□□□□ 0.4
TRAF4-210ENST00000475329 SPATA31A6Q5VVP1 1343 aa17.56■□□□□ 0.4
TRAF4-210ENST00000475329 DZIP1LQ8IYY4 767 aaKnown RBP17.56■□□□□ 0.4
TRAF4-210ENST00000475329 PAPPAQ13219 1627 aa17.56■□□□□ 0.4
TRAF4-210ENST00000475329 C5P01031 1676 aa17.55■□□□□ 0.4
TRAF4-210ENST00000475329 TRIM27P14373 513 aa17.55■□□□□ 0.4
TRAF4-210ENST00000475329 ILDR2Q71H61 639 aa17.55■□□□□ 0.4
TRAF4-210ENST00000475329 PELP1Q8IZL8 1130 aaKnown RBP17.55■□□□□ 0.4
TRAF4-210ENST00000475329 SLC52A2Q9HAB3 445 aa17.55■□□□□ 0.4
TRAF4-210ENST00000475329 USP35Q9P2H5 1018 aa17.55■□□□□ 0.4
TRAF4-210ENST00000475329 N4BP2Q86UW6 1770 aaPredicted RBP17.55■□□□□ 0.4
TRAF4-210ENST00000475329 ITGB4P16144 1822 aa17.54■□□□□ 0.4
TRAF4-210ENST00000475329 LAMB4A4D0S4 1761 aa17.54■□□□□ 0.4
TRAF4-210ENST00000475329 UBR2Q8IWV8 1755 aa17.54■□□□□ 0.4
TRAF4-210ENST00000475329 RLBP1P12271 317 aa17.54■□□□□ 0.4
TRAF4-210ENST00000475329 ARHGAP45Q92619 1136 aa17.54■□□□□ 0.4
TRAF4-210ENST00000475329 TNNQ9UQP3 1299 aa17.54■□□□□ 0.4
TRAF4-210ENST00000475329 COG6Q9Y2V7 657 aa17.54■□□□□ 0.4
TRAF4-210ENST00000475329 LRP6O75581 1613 aa17.54■□□□□ 0.4
TRAF4-210ENST00000475329 TCERG1O14776 1098 aaKnown RBP17.53■□□□□ 0.4
TRAF4-210ENST00000475329 HOXB7P09629 217 aa17.53■□□□□ 0.4
TRAF4-210ENST00000475329 EIF4A1P60842 406 aaKnown RBP17.53■□□□□ 0.4
TRAF4-210ENST00000475329 CLUAP1Q96AJ1 413 aa17.53■□□□□ 0.4
TRAF4-210ENST00000475329 TNS2Q63HR2 1409 aa17.53■□□□□ 0.4
TRAF4-210ENST00000475329 AAMPQ13685 434 aa17.52■□□□□ 0.4
TRAF4-210ENST00000475329 SPATA31A1Q5TZJ5 1347 aa17.51■□□□□ 0.39
TRAF4-210ENST00000475329 MVPQ14764 893 aaKnown RBP17.51■□□□□ 0.39
TRAF4-210ENST00000475329 NKX1-1Q15270 411 aaPredicted RBP17.51■□□□□ 0.39
TRAF4-210ENST00000475329 CCDC30Q5VVM6 783 aa17.51■□□□□ 0.39
TRAF4-210ENST00000475329 CDCA7Q9BWT1 371 aaPredicted RBP17.51■□□□□ 0.39
TRAF4-210ENST00000475329 STK31Q9BXU1 1019 aa17.51■□□□□ 0.39
TRAF4-210ENST00000475329 CHMP4AQ9BY43 222 aa17.51■□□□□ 0.39
TRAF4-210ENST00000475329 API5Q9BZZ5 524 aaKnown RBP17.51■□□□□ 0.39
TRAF4-210ENST00000475329 THRAP3Q9Y2W1 955 aaKnown RBP17.51■□□□□ 0.39
TRAF4-210ENST00000475329 DOT1LQ8TEK3 1739 aa17.5■□□□□ 0.39
TRAF4-210ENST00000475329 PTPRCP08575 1304 aa17.49■□□□□ 0.39
TRAF4-210ENST00000475329 SPATA31A5Q5VU36 1347 aa17.49■□□□□ 0.39
TRAF4-210ENST00000475329 SPATA31A7Q8IWB4 1347 aa17.49■□□□□ 0.39
TRAF4-210ENST00000475329 KCNQ3O43525 872 aa17.49■□□□□ 0.39
TRAF4-210ENST00000475329 CABP4P57796 275 aa17.49■□□□□ 0.39
TRAF4-210ENST00000475329 DDX54Q8TDD1 881 aaKnown RBP17.49■□□□□ 0.39
TRAF4-210ENST00000475329 HEG1Q9ULI3 1381 aa17.49■□□□□ 0.39
TRAF4-210ENST00000475329 GLI3P10071 1580 aa17.49■□□□□ 0.39
TRAF4-210ENST00000475329 ABCC4O15439 1325 aa17.48■□□□□ 0.39
TRAF4-210ENST00000475329 ERVV-2B6SEH9 535 aa17.48■□□□□ 0.39
TRAF4-210ENST00000475329 HDGFL1Q5TGJ6 251 aa17.48■□□□□ 0.39
TRAF4-210ENST00000475329 ITPRIPQ8IWB1 547 aa17.48■□□□□ 0.39
TRAF4-210ENST00000475329 NFATC2IPQ8NCF5 419 aa17.48■□□□□ 0.39
TRAF4-210ENST00000475329 C8orf37Q96NL8 207 aa17.48■□□□□ 0.39
TRAF4-210ENST00000475329 SLC4A2P04920 1241 aa17.47■□□□□ 0.39
TRAF4-210ENST00000475329 ZNF790Q6PG37 636 aa17.47■□□□□ 0.39
TRAF4-210ENST00000475329 UNC5CLQ8IV45 518 aa17.47■□□□□ 0.39
TRAF4-210ENST00000475329 TMEM57Q8N5G2 664 aa17.47■□□□□ 0.39
TRAF4-210ENST00000475329 NGLY1Q96IV0 654 aa17.47■□□□□ 0.39
TRAF4-210ENST00000475329 DDX19BQ9UMR2 479 aa17.47■□□□□ 0.39
TRAF4-210ENST00000475329 BCL9LQ86UU0 1499 aa17.47■□□□□ 0.39
TRAF4-210ENST00000475329 RGS12O14924 1447 aa17.47■□□□□ 0.39
TRAF4-210ENST00000475329 CCDC9Q9Y3X0 531 aaKnown RBP17.46■□□□□ 0.39
TRAF4-210ENST00000475329 EXOC5O00471 708 aa17.45■□□□□ 0.38
TRAF4-210ENST00000475329 BARGINQ6ZT62 677 aa17.45■□□□□ 0.38
TRAF4-210ENST00000475329 TTC5Q8N0Z6 440 aa17.45■□□□□ 0.38
TRAF4-210ENST00000475329 GIGYF1O75420 1035 aaPredicted RBP17.44■□□□□ 0.38
TRAF4-210ENST00000475329 SLC39A6Q13433 755 aa17.44■□□□□ 0.38
TRAF4-210ENST00000475329 VPS72Q15906 364 aa17.44■□□□□ 0.38
TRAF4-210ENST00000475329 FNBP4Q8N3X1 1017 aaPredicted RBP17.44■□□□□ 0.38
TRAF4-210ENST00000475329 NECTIN2Q92692 538 aa17.44■□□□□ 0.38
TRAF4-210ENST00000475329 KAT6BQ8WYB5 2073 aa17.44■□□□□ 0.38
TRAF4-210ENST00000475329 KCPQ6ZWJ8 1503 aa17.43■□□□□ 0.38
TRAF4-210ENST00000475329 MEX3CQ5U5Q3 659 aaKnown RBP17.43■□□□□ 0.38
TRAF4-210ENST00000475329 CHMP4BQ9H444 224 aaKnown RBP17.43■□□□□ 0.38
TRAF4-210ENST00000475329 PXDNLA1KZ92 1463 aa17.43■□□□□ 0.38
TRAF4-210ENST00000475329 THSD7AQ9UPZ6 1657 aa17.42■□□□□ 0.38
TRAF4-210ENST00000475329 EIF2S2P20042 333 aaKnown RBP17.42■□□□□ 0.38
TRAF4-210ENST00000475329 G2E3Q7L622 706 aa17.42■□□□□ 0.38
TRAF4-210ENST00000475329 FMNL2Q96PY5 1086 aa17.42■□□□□ 0.38
TRAF4-210ENST00000475329 FLIIQ13045 1269 aa17.41■□□□□ 0.38
TRAF4-210ENST00000475329 DDB1Q16531 1140 aa17.41■□□□□ 0.38
TRAF4-210ENST00000475329 TMOD3Q9NYL9 352 aa17.41■□□□□ 0.38
TRAF4-210ENST00000475329 INTS3Q68E01 1043 aaKnown RBP17.4■□□□□ 0.38
TRAF4-210ENST00000475329 CENPQQ7L2Z9 268 aaPredicted RBP17.4■□□□□ 0.38
TRAF4-210ENST00000475329 ZNF496Q96IT1 587 aaPredicted RBP17.4■□□□□ 0.38
TRAF4-210ENST00000475329 CHPF2Q9P2E5 772 aa17.4■□□□□ 0.38
TRAF4-210ENST00000475329 DBF4Q9UBU7 674 aaPredicted RBP17.4■□□□□ 0.38
TRAF4-210ENST00000475329 USP21Q9UK80 565 aa17.4■□□□□ 0.38
TRAF4-210ENST00000475329 KDM2BQ8NHM5 1336 aa17.4■□□□□ 0.38
TRAF4-210ENST00000475329 SNRPA1P09661 255 aaKnown RBP17.39■□□□□ 0.37
TRAF4-210ENST00000475329 FKBP5Q13451 457 aaPredicted RBP17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms