RNA–Protein interactions for RNA: ENST00000475319.1

ECHDC1-215, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 1,543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-215ENST00000475319 FAM193AP78312 1265 aa7.75□□□□□ -1.17
ECHDC1-215ENST00000475319 IRX3P78415 501 aaPredicted RBP7.75□□□□□ -1.17
ECHDC1-215ENST00000475319 TAF3Q5VWG9 929 aa7.75□□□□□ -1.17
ECHDC1-215ENST00000475319 PHLDB3Q6NSJ2 640 aa7.75□□□□□ -1.17
ECHDC1-215ENST00000475319 TXNDC2Q86VQ3 553 aa7.75□□□□□ -1.17
ECHDC1-215ENST00000475319 NOVA2Q9UNW9 492 aaKnown RBP7.75□□□□□ -1.17
ECHDC1-215ENST00000475319 MARSP56192 900 aaKnown RBP7.74□□□□□ -1.17
ECHDC1-215ENST00000475319 FBXO45P0C2W1 286 aa7.73□□□□□ -1.17
ECHDC1-215ENST00000475319 NR1H3Q13133 447 aa7.73□□□□□ -1.17
ECHDC1-215ENST00000475319 ZFP42Q96MM3 310 aa7.73□□□□□ -1.17
ECHDC1-215ENST00000475319 PNNQ9H307 717 aaKnown RBP7.73□□□□□ -1.17
ECHDC1-215ENST00000475319 RBM47A0AV96 593 aaKnown RBP7.73□□□□□ -1.17
ECHDC1-215ENST00000475319 USP17L3A6NCW0 530 aa7.73□□□□□ -1.17
ECHDC1-215ENST00000475319 USP17L4A6NCW7 530 aa7.73□□□□□ -1.17
ECHDC1-215ENST00000475319 ALDH1A1P00352 501 aa7.73□□□□□ -1.17
ECHDC1-215ENST00000475319 TNNT2P45379 298 aaPredicted RBP7.73□□□□□ -1.17
ECHDC1-215ENST00000475319 PUS10Q3MIT2 529 aaKnown RBP7.73□□□□□ -1.17
ECHDC1-215ENST00000475319 USP17L2Q6R6M4 530 aa7.73□□□□□ -1.17
ECHDC1-215ENST00000475319 USP17L1Q7RTZ2 530 aa7.73□□□□□ -1.17
ECHDC1-215ENST00000475319 ZNF592Q92610 1267 aa7.73□□□□□ -1.17
ECHDC1-215ENST00000475319 SCARF2Q96GP6 870 aaPredicted RBP7.73□□□□□ -1.17
ECHDC1-215ENST00000475319 PSMD1Q99460 953 aa7.73□□□□□ -1.17
ECHDC1-215ENST00000475319 FANCD2Q9BXW9 1451 aa7.72□□□□□ -1.17
ECHDC1-215ENST00000475319 WDR62O43379 1518 aa7.72□□□□□ -1.17
ECHDC1-215ENST00000475319 FMNL1O95466 1100 aaPredicted RBP7.72□□□□□ -1.17
ECHDC1-215ENST00000475319 ATP6V1AP38606 617 aa7.72□□□□□ -1.17
ECHDC1-215ENST00000475319 TMEM51Q9NW97 253 aa7.72□□□□□ -1.17
ECHDC1-215ENST00000475319 SKIP12755 728 aa7.71□□□□□ -1.18
ECHDC1-215ENST00000475319 RETREG3Q86VR2 466 aa7.71□□□□□ -1.18
ECHDC1-215ENST00000475319 NFATC2IPQ8NCF5 419 aa7.71□□□□□ -1.18
ECHDC1-215ENST00000475319 TRIM44Q96DX7 344 aaPredicted RBP7.71□□□□□ -1.18
ECHDC1-215ENST00000475319 USP17L5A8MUK1 530 aa7.7□□□□□ -1.18
ECHDC1-215ENST00000475319 DNAJC14Q6Y2X3 702 aaPredicted RBP7.7□□□□□ -1.18
ECHDC1-215ENST00000475319 DEPDC4Q8N2C3 294 aa7.7□□□□□ -1.18
ECHDC1-215ENST00000475319 FAM160A2Q8N612 972 aaPredicted RBP7.7□□□□□ -1.18
ECHDC1-215ENST00000475319 ZNF830Q96NB3 372 aaPredicted RBP7.7□□□□□ -1.18
ECHDC1-215ENST00000475319 PRDM10Q9NQV6 1147 aa7.7□□□□□ -1.18
ECHDC1-215ENST00000475319 SLAIN2Q9P270 581 aa7.7□□□□□ -1.18
ECHDC1-215ENST00000475319 KCNG1Q9UIX4 513 aa7.7□□□□□ -1.18
ECHDC1-215ENST00000475319 ZBBXA8MT70 800 aa7.69□□□□□ -1.18
ECHDC1-215ENST00000475319 K7ELQ4 463 aaPredicted RBP7.69□□□□□ -1.18
ECHDC1-215ENST00000475319 KIF20AO95235 890 aa7.69□□□□□ -1.18
ECHDC1-215ENST00000475319 SSFA2P28290 1259 aa7.69□□□□□ -1.18
ECHDC1-215ENST00000475319 CRTC2Q53ET0 693 aaPredicted RBP7.69□□□□□ -1.18
ECHDC1-215ENST00000475319 RC3H1Q5TC82 1133 aaKnown RBP7.69□□□□□ -1.18
ECHDC1-215ENST00000475319 MTERF4Q7Z6M4 381 aaKnown RBP7.69□□□□□ -1.18
ECHDC1-215ENST00000475319 PLEKHM2Q8IWE5 1019 aa7.69□□□□□ -1.18
ECHDC1-215ENST00000475319 USP17L15C9J2P7 530 aa7.68□□□□□ -1.18
ECHDC1-215ENST00000475319 USP17L10C9JJH3 530 aa7.68□□□□□ -1.18
ECHDC1-215ENST00000475319 USP17L13C9JLJ4 530 aa7.68□□□□□ -1.18
ECHDC1-215ENST00000475319 USP17L12C9JPN9 530 aa7.68□□□□□ -1.18
ECHDC1-215ENST00000475319 USP17L11C9JVI0 530 aa7.68□□□□□ -1.18
ECHDC1-215ENST00000475319 USP17L21D6R901 530 aa7.68□□□□□ -1.18
ECHDC1-215ENST00000475319 USP17L18D6R9N7 530 aa7.68□□□□□ -1.18
ECHDC1-215ENST00000475319 USP17L22D6RA61 530 aa7.68□□□□□ -1.18
ECHDC1-215ENST00000475319 USP17L17D6RBQ6 530 aa7.68□□□□□ -1.18
ECHDC1-215ENST00000475319 USP17L19D6RCP7 530 aa7.68□□□□□ -1.18
ECHDC1-215ENST00000475319 USP17L20D6RJB6 530 aa7.68□□□□□ -1.18
ECHDC1-215ENST00000475319 ARID4AP29374 1257 aaPredicted RBP7.68□□□□□ -1.18
ECHDC1-215ENST00000475319 ITGAEP38570 1179 aa7.68□□□□□ -1.18
ECHDC1-215ENST00000475319 USP17L24Q0WX57 530 aa7.68□□□□□ -1.18
ECHDC1-215ENST00000475319 SCARF1Q14162 830 aa7.68□□□□□ -1.18
ECHDC1-215ENST00000475319 DESI1Q6ICB0 168 aa7.68□□□□□ -1.18
ECHDC1-215ENST00000475319 LYPD8Q6UX82 237 aa7.68□□□□□ -1.18
ECHDC1-215ENST00000475319 SVOPQ8N4V2 548 aa7.68□□□□□ -1.18
ECHDC1-215ENST00000475319 FAM174AQ8TBP5 190 aa7.68□□□□□ -1.18
ECHDC1-215ENST00000475319 IGSF5Q9NSI5 407 aa7.68□□□□□ -1.18
ECHDC1-215ENST00000475319 WIZO95785 1651 aa7.68□□□□□ -1.18
ECHDC1-215ENST00000475319 FAM196BA6NMK8 535 aa7.68□□□□□ -1.18
ECHDC1-215ENST00000475319 CEP120Q8N960 986 aa7.68□□□□□ -1.18
ECHDC1-215ENST00000475319 THAP11Q96EK4 314 aa7.68□□□□□ -1.18
ECHDC1-215ENST00000475319 MKRN1Q9UHC7 482 aaKnown RBP7.68□□□□□ -1.18
ECHDC1-215ENST00000475319 HDAC5Q9UQL6 1122 aa7.68□□□□□ -1.18
ECHDC1-215ENST00000475319 LAS1LQ9Y4W2 734 aaKnown RBP7.68□□□□□ -1.18
ECHDC1-215ENST00000475319 CFTRP13569 1480 aa7.67□□□□□ -1.18
ECHDC1-215ENST00000475319 SLC20A2Q08357 652 aa7.67□□□□□ -1.18
ECHDC1-215ENST00000475319 NOM1Q5C9Z4 860 aaKnown RBP7.67□□□□□ -1.18
ECHDC1-215ENST00000475319 SPOCK3Q9BQ16 436 aa7.67□□□□□ -1.18
ECHDC1-215ENST00000475319 KRTAP4-12Q9BQ66 201 aa7.67□□□□□ -1.18
ECHDC1-215ENST00000475319 KIAA1522Q9P206 1035 aaPredicted RBP7.67□□□□□ -1.18
ECHDC1-215ENST00000475319 FKBPLQ9UIM3 349 aa7.67□□□□□ -1.18
ECHDC1-215ENST00000475319 WASF2Q9Y6W5 498 aa7.67□□□□□ -1.18
ECHDC1-215ENST00000475319 KRTAP4-8A0A0G2JLE6 195 aa7.66□□□□□ -1.18
ECHDC1-215ENST00000475319 SOWAHDA6NJG2 315 aa7.66□□□□□ -1.18
ECHDC1-215ENST00000475319 SERPINB4P48594 390 aa7.66□□□□□ -1.18
ECHDC1-215ENST00000475319 WNT7BP56706 349 aa7.66□□□□□ -1.18
ECHDC1-215ENST00000475319 FAM69CQ0P6D2 419 aa7.66□□□□□ -1.18
ECHDC1-215ENST00000475319 PTK7Q13308 1070 aa7.66□□□□□ -1.18
ECHDC1-215ENST00000475319 MORN1Q5T089 497 aa7.66□□□□□ -1.18
ECHDC1-215ENST00000475319 GALNT6Q8NCL4 622 aa7.66□□□□□ -1.18
ECHDC1-215ENST00000475319 MRRFQ96E11 262 aaKnown RBP7.66□□□□□ -1.18
ECHDC1-215ENST00000475319 CNTNAP3BQ96NU0 1288 aa7.66□□□□□ -1.18
ECHDC1-215ENST00000475319 KRTAP9-9Q9BYP9 154 aa7.66□□□□□ -1.18
ECHDC1-215ENST00000475319 KRTAP9-4Q9BYQ2 154 aa7.66□□□□□ -1.18
ECHDC1-215ENST00000475319 CNTNAP3Q9BZ76 1288 aa7.66□□□□□ -1.18
ECHDC1-215ENST00000475319 SLC27A5Q9Y2P5 690 aa7.66□□□□□ -1.18
ECHDC1-215ENST00000475319 APPP05067 770 aa7.65□□□□□ -1.18
ECHDC1-215ENST00000475319 ERCC3P19447 782 aa7.65□□□□□ -1.18
ECHDC1-215ENST00000475319 RASA1P20936 1047 aa7.65□□□□□ -1.18
ECHDC1-215ENST00000475319 ZNF385CQ66K41 422 aaPredicted RBP7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms