RNA–Protein interactions for RNA: ENST00000474945.1

SPCS1-204, Transcript of signal peptidase complex subunit 1, humanhuman

TSL 2

Gene SPCS1, Length 981 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS1-204ENST00000474945 POLD1P28340 1107 aa18.34■□□□□ 0.53
SPCS1-204ENST00000474945 SGIP1Q9BQI5 828 aa18.34■□□□□ 0.53
SPCS1-204ENST00000474945 ATG3Q9NT62 314 aa18.34■□□□□ 0.53
SPCS1-204ENST00000474945 ATP6V1AP38606 617 aa18.33■□□□□ 0.52
SPCS1-204ENST00000474945 LINC00116Q8NCU8 138 aa18.33■□□□□ 0.52
SPCS1-204ENST00000474945 ARXQ96QS3 562 aa18.33■□□□□ 0.52
SPCS1-204ENST00000474945 PHF14O94880 888 aa18.32■□□□□ 0.52
SPCS1-204ENST00000474945 AKAP4Q5JQC9 854 aa18.32■□□□□ 0.52
SPCS1-204ENST00000474945 COL23A1Q86Y22 540 aaPredicted RBP18.32■□□□□ 0.52
SPCS1-204ENST00000474945 KLHL34Q8N239 644 aa18.32■□□□□ 0.52
SPCS1-204ENST00000474945 FHDC1Q9C0D6 1143 aaPredicted RBP18.32■□□□□ 0.52
SPCS1-204ENST00000474945 ITPK1Q13572 414 aa18.31■□□□□ 0.52
SPCS1-204ENST00000474945 MSL1Q68DK7 614 aa18.31■□□□□ 0.52
SPCS1-204ENST00000474945 RBM42Q9BTD8 480 aaKnown RBP18.31■□□□□ 0.52
SPCS1-204ENST00000474945 SCN11AQ9UI33 1791 aa18.31■□□□□ 0.52
SPCS1-204ENST00000474945 MRC1P22897 1456 aa18.31■□□□□ 0.52
SPCS1-204ENST00000474945 PPP2R1AP30153 589 aa18.3■□□□□ 0.52
SPCS1-204ENST00000474945 FLAD1Q8NFF5 587 aa18.3■□□□□ 0.52
SPCS1-204ENST00000474945 UBR3Q6ZT12 1888 aa18.3■□□□□ 0.52
SPCS1-204ENST00000474945 COL24A1Q17RW2 1714 aa18.29■□□□□ 0.52
SPCS1-204ENST00000474945 DCAF8L1A6NGE4 600 aa18.29■□□□□ 0.52
SPCS1-204ENST00000474945 GNPATO15228 680 aa18.29■□□□□ 0.52
SPCS1-204ENST00000474945 MTHFSDQ2M296 383 aaKnown RBP18.29■□□□□ 0.52
SPCS1-204ENST00000474945 NFATC2IPQ8NCF5 419 aa18.28■□□□□ 0.52
SPCS1-204ENST00000474945 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.27■□□□□ 0.52
SPCS1-204ENST00000474945 AMIGO3Q86WK7 504 aa18.27■□□□□ 0.52
SPCS1-204ENST00000474945 SYT17Q9BSW7 474 aa18.27■□□□□ 0.52
SPCS1-204ENST00000474945 NUDCQ9Y266 331 aa18.27■□□□□ 0.52
SPCS1-204ENST00000474945 ZNF831Q5JPB2 1677 aa18.27■□□□□ 0.52
SPCS1-204ENST00000474945 MAP3K5Q99683 1374 aa18.27■□□□□ 0.51
SPCS1-204ENST00000474945 COL5A3P25940 1745 aaPredicted RBP18.26■□□□□ 0.51
SPCS1-204ENST00000474945 PTCD1O75127 700 aaKnown RBP18.26■□□□□ 0.51
SPCS1-204ENST00000474945 SSFA2P28290 1259 aa18.26■□□□□ 0.51
SPCS1-204ENST00000474945 NCBP3Q53F19 620 aaKnown RBP18.26■□□□□ 0.51
SPCS1-204ENST00000474945 SMIM5Q71RC9 77 aa18.26■□□□□ 0.51
SPCS1-204ENST00000474945 SLC52A2Q9HAB3 445 aa18.26■□□□□ 0.51
SPCS1-204ENST00000474945 ADAMTS7Q9UKP4 1686 aa18.25■□□□□ 0.51
SPCS1-204ENST00000474945 RNMTO43148 476 aaKnown RBP18.25■□□□□ 0.51
SPCS1-204ENST00000474945 PRKAR2BP31323 418 aa18.25■□□□□ 0.51
SPCS1-204ENST00000474945 GAS2L2Q8NHY3 880 aa18.25■□□□□ 0.51
SPCS1-204ENST00000474945 SLC4A9Q96Q91 983 aa18.25■□□□□ 0.51
SPCS1-204ENST00000474945 VIRMAQ69YN4 1812 aaKnown RBP18.24■□□□□ 0.51
SPCS1-204ENST00000474945 U2AF1L5P0DN76 240 aaPredicted RBP18.24■□□□□ 0.51
SPCS1-204ENST00000474945 U2AF1Q01081 240 aaKnown RBP eCLIP18.24■□□□□ 0.51
SPCS1-204ENST00000474945 LGR6Q9HBX8 967 aa18.24■□□□□ 0.51
SPCS1-204ENST00000474945 CNTNAP4Q9C0A0 1308 aa18.23■□□□□ 0.51
SPCS1-204ENST00000474945 TJP1Q07157 1748 aa18.23■□□□□ 0.51
SPCS1-204ENST00000474945 RSPH6AQ9H0K4 717 aa18.23■□□□□ 0.51
SPCS1-204ENST00000474945 CICQ96RK0 1608 aaPredicted RBP18.23■□□□□ 0.51
SPCS1-204ENST00000474945 RTCBQ9Y3I0 505 aaKnown RBP18.22■□□□□ 0.51
SPCS1-204ENST00000474945 KCPQ6ZWJ8 1503 aa18.21■□□□□ 0.51
SPCS1-204ENST00000474945 GNAT3A8MTJ3 354 aa18.2■□□□□ 0.5
SPCS1-204ENST00000474945 TEFQ10587 303 aa18.19■□□□□ 0.5
SPCS1-204ENST00000474945 SLC39A6Q13433 755 aa18.19■□□□□ 0.5
SPCS1-204ENST00000474945 CRKLP46109 303 aaKnown RBP18.18■□□□□ 0.5
SPCS1-204ENST00000474945 DDX10Q13206 875 aaKnown RBP18.18■□□□□ 0.5
SPCS1-204ENST00000474945 PELP1Q8IZL8 1130 aaKnown RBP18.18■□□□□ 0.5
SPCS1-204ENST00000474945 TTC5Q8N0Z6 440 aa18.18■□□□□ 0.5
SPCS1-204ENST00000474945 NLGN2Q8NFZ4 835 aa18.18■□□□□ 0.5
SPCS1-204ENST00000474945 PHACTR3Q96KR7 559 aa18.18■□□□□ 0.5
SPCS1-204ENST00000474945 C4AP0C0L4 1744 aa18.18■□□□□ 0.5
SPCS1-204ENST00000474945 TRAPPC3LQ5T215 181 aa18.17■□□□□ 0.5
SPCS1-204ENST00000474945 RC3H1Q5TC82 1133 aaKnown RBP18.17■□□□□ 0.5
SPCS1-204ENST00000474945 UBR2Q8IWV8 1755 aa18.17■□□□□ 0.5
SPCS1-204ENST00000474945 DNAJC10Q8IXB1 793 aa18.16■□□□□ 0.5
SPCS1-204ENST00000474945 UTRNP46939 3433 aa18.15■□□□□ 0.5
SPCS1-204ENST00000474945 RPS6KA4O75676 772 aa18.15■□□□□ 0.5
SPCS1-204ENST00000474945 FCHSD2O94868 740 aa18.15■□□□□ 0.5
SPCS1-204ENST00000474945 YY1P25490 414 aa18.15■□□□□ 0.5
SPCS1-204ENST00000474945 RFC4P35249 363 aa18.15■□□□□ 0.5
SPCS1-204ENST00000474945 SIPA1L3O60292 1781 aaPredicted RBP18.14■□□□□ 0.5
SPCS1-204ENST00000474945 MYH14Q7Z406 1995 aaKnown RBP18.14■□□□□ 0.49
SPCS1-204ENST00000474945 NEFMP07197 916 aa18.14■□□□□ 0.49
SPCS1-204ENST00000474945 KCNA4P22459 653 aa18.14■□□□□ 0.49
SPCS1-204ENST00000474945 GPR162Q16538 588 aa18.14■□□□□ 0.49
SPCS1-204ENST00000474945 IL17REQ8NFR9 667 aa18.14■□□□□ 0.49
SPCS1-204ENST00000474945 ARHGEF1Q92888 912 aaKnown RBP18.14■□□□□ 0.49
SPCS1-204ENST00000474945 CEMIPQ8WUJ3 1361 aa18.14■□□□□ 0.49
SPCS1-204ENST00000474945 MMP10P09238 476 aa18.13■□□□□ 0.49
SPCS1-204ENST00000474945 RALBP1Q15311 655 aa18.13■□□□□ 0.49
SPCS1-204ENST00000474945 RTF1Q92541 710 aaKnown RBP18.13■□□□□ 0.49
SPCS1-204ENST00000474945 CCDC87Q9NVE4 849 aa18.13■□□□□ 0.49
SPCS1-204ENST00000474945 INTS5Q6P9B9 1019 aaKnown RBP18.11■□□□□ 0.49
SPCS1-204ENST00000474945 CD2APQ9Y5K6 639 aa18.11■□□□□ 0.49
SPCS1-204ENST00000474945 CYP19A1P11511 503 aaPredicted RBP18.1■□□□□ 0.49
SPCS1-204ENST00000474945 ZNF790Q6PG37 636 aa18.1■□□□□ 0.49
SPCS1-204ENST00000474945 MCM10Q7L590 875 aa18.1■□□□□ 0.49
SPCS1-204ENST00000474945 VSIG10Q8N0Z9 540 aa18.1■□□□□ 0.49
SPCS1-204ENST00000474945 NLGN1Q8N2Q7 840 aa18.1■□□□□ 0.49
SPCS1-204ENST00000474945 SRP68Q9UHB9 627 aaKnown RBP18.1■□□□□ 0.49
SPCS1-204ENST00000474945 GOLGB1Q14789 3259 aaKnown RBP18.1■□□□□ 0.49
SPCS1-204ENST00000474945 COL15A1P39059 1388 aa18.09■□□□□ 0.49
SPCS1-204ENST00000474945 HEG1Q9ULI3 1381 aa18.09■□□□□ 0.49
SPCS1-204ENST00000474945 SOS1Q07889 1333 aaPredicted RBP18.09■□□□□ 0.49
SPCS1-204ENST00000474945 MYBBP1AQ9BQG0 1328 aaKnown RBP18.09■□□□□ 0.49
SPCS1-204ENST00000474945 USP42Q9H9J4 1324 aaKnown RBP18.09■□□□□ 0.49
SPCS1-204ENST00000474945 MAPK8IP3Q9UPT6 1336 aa18.09■□□□□ 0.49
SPCS1-204ENST00000474945 BTBD11A6QL63 1104 aa18.09■□□□□ 0.49
SPCS1-204ENST00000474945 GYS1P13807 737 aa18.09■□□□□ 0.49
SPCS1-204ENST00000474945 HOXD11P31277 338 aaPredicted RBP18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms