RNA–Protein interactions for RNA: ENST00000474916.1

CDK11A-214, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 3

Gene CDK11A, Length 752 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-214ENST00000474916 SCN11AQ9UI33 1791 aa22.38■■□□□ 1.17
CDK11A-214ENST00000474916 SENP3-EIF4A1A0A087X0R7 540 aa22.36■■□□□ 1.17
CDK11A-214ENST00000474916 KLHL34Q8N239 644 aa22.36■■□□□ 1.17
CDK11A-214ENST00000474916 SLC4A9Q96Q91 983 aa22.36■■□□□ 1.17
CDK11A-214ENST00000474916 MAP3K5Q99683 1374 aa22.36■■□□□ 1.17
CDK11A-214ENST00000474916 COL3A1P02461 1466 aaPredicted RBP22.35■■□□□ 1.17
CDK11A-214ENST00000474916 COL5A3P25940 1745 aaPredicted RBP22.34■■□□□ 1.17
CDK11A-214ENST00000474916 PHF14O94880 888 aa22.34■■□□□ 1.17
CDK11A-214ENST00000474916 HMOX1P09601 288 aa22.34■■□□□ 1.17
CDK11A-214ENST00000474916 POLD1P28340 1107 aa22.34■■□□□ 1.17
CDK11A-214ENST00000474916 DCAF5Q96JK2 942 aa22.34■■□□□ 1.17
CDK11A-214ENST00000474916 AK7Q96M32 723 aa22.34■■□□□ 1.17
CDK11A-214ENST00000474916 ERVV-2B6SEH9 535 aa22.33■■□□□ 1.17
CDK11A-214ENST00000474916 AMOTQ4VCS5 1084 aa22.33■■□□□ 1.17
CDK11A-214ENST00000474916 NLGN2Q8NFZ4 835 aa22.33■■□□□ 1.17
CDK11A-214ENST00000474916 MYH14Q7Z406 1995 aaKnown RBP22.32■■□□□ 1.16
CDK11A-214ENST00000474916 ATP6V1AP38606 617 aa22.32■■□□□ 1.16
CDK11A-214ENST00000474916 NPC1L1Q9UHC9 1359 aa22.32■■□□□ 1.16
CDK11A-214ENST00000474916 ZNF831Q5JPB2 1677 aa22.32■■□□□ 1.16
CDK11A-214ENST00000474916 HSP90AB1P08238 724 aaKnown RBP22.31■■□□□ 1.16
CDK11A-214ENST00000474916 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.3■■□□□ 1.16
CDK11A-214ENST00000474916 CABP4P57796 275 aa22.29■■□□□ 1.16
CDK11A-214ENST00000474916 C1orf141Q5JVX7 400 aa22.29■■□□□ 1.16
CDK11A-214ENST00000474916 TJP1Q07157 1748 aa22.28■■□□□ 1.16
CDK11A-214ENST00000474916 GNPATO15228 680 aa22.28■■□□□ 1.16
CDK11A-214ENST00000474916 DIAPH1O60610 1272 aaKnown RBP22.28■■□□□ 1.16
CDK11A-214ENST00000474916 RBM42Q9BTD8 480 aaKnown RBP22.28■■□□□ 1.16
CDK11A-214ENST00000474916 CEP350Q5VT06 3117 aa22.27■■□□□ 1.16
CDK11A-214ENST00000474916 NFATC2IPQ8NCF5 419 aa22.27■■□□□ 1.16
CDK11A-214ENST00000474916 LGR6Q9HBX8 967 aa22.27■■□□□ 1.16
CDK11A-214ENST00000474916 C1QTNF8P60827 252 aa22.26■■□□□ 1.15
CDK11A-214ENST00000474916 FLAD1Q8NFF5 587 aa22.26■■□□□ 1.15
CDK11A-214ENST00000474916 ADAMTS7Q9UKP4 1686 aa22.26■■□□□ 1.15
CDK11A-214ENST00000474916 SSFA2P28290 1259 aa22.25■■□□□ 1.15
CDK11A-214ENST00000474916 MTHFSDQ2M296 383 aaKnown RBP22.25■■□□□ 1.15
CDK11A-214ENST00000474916 C4AP0C0L4 1744 aa22.25■■□□□ 1.15
CDK11A-214ENST00000474916 AKAP4Q5JQC9 854 aa22.24■■□□□ 1.15
CDK11A-214ENST00000474916 MRC1P22897 1456 aa22.23■■□□□ 1.15
CDK11A-214ENST00000474916 PTCD1O75127 700 aaKnown RBP22.23■■□□□ 1.15
CDK11A-214ENST00000474916 CICQ96RK0 1608 aaPredicted RBP22.22■■□□□ 1.15
CDK11A-214ENST00000474916 RNMTO43148 476 aaKnown RBP22.21■■□□□ 1.15
CDK11A-214ENST00000474916 PELP1Q8IZL8 1130 aaKnown RBP22.21■■□□□ 1.15
CDK11A-214ENST00000474916 U2SURPO15042 1029 aaKnown RBP22.2■■□□□ 1.14
CDK11A-214ENST00000474916 HMGB2P26583 209 aaKnown RBP22.2■■□□□ 1.14
CDK11A-214ENST00000474916 GPR162Q16538 588 aa22.2■■□□□ 1.14
CDK11A-214ENST00000474916 YBX3P16989 372 aaKnown RBP eCLIP22.19■■□□□ 1.14
CDK11A-214ENST00000474916 SLC52A2Q9HAB3 445 aa22.19■■□□□ 1.14
CDK11A-214ENST00000474916 CNTNAP4Q9C0A0 1308 aa22.19■■□□□ 1.14
CDK11A-214ENST00000474916 KCPQ6ZWJ8 1503 aa22.18■■□□□ 1.14
CDK11A-214ENST00000474916 SLC39A6Q13433 755 aa22.18■■□□□ 1.14
CDK11A-214ENST00000474916 RTCBQ9Y3I0 505 aaKnown RBP22.17■■□□□ 1.14
CDK11A-214ENST00000474916 SIPA1L3O60292 1781 aaPredicted RBP22.17■■□□□ 1.14
CDK11A-214ENST00000474916 UBR2Q8IWV8 1755 aa22.17■■□□□ 1.14
CDK11A-214ENST00000474916 PPP2R1AP30153 589 aa22.16■■□□□ 1.14
CDK11A-214ENST00000474916 RC3H1Q5TC82 1133 aaKnown RBP22.16■■□□□ 1.14
CDK11A-214ENST00000474916 IFFO2Q5TF58 517 aa22.16■■□□□ 1.14
CDK11A-214ENST00000474916 ARHGEF1Q92888 912 aaKnown RBP22.16■■□□□ 1.14
CDK11A-214ENST00000474916 KIAA1551Q9HCM1 1747 aa22.15■■□□□ 1.14
CDK11A-214ENST00000474916 CRKLP46109 303 aaKnown RBP22.15■■□□□ 1.14
CDK11A-214ENST00000474916 TRAPPC3LQ5T215 181 aa22.15■■□□□ 1.14
CDK11A-214ENST00000474916 RPS6KA4O75676 772 aa22.14■■□□□ 1.13
CDK11A-214ENST00000474916 DNAJC10Q8IXB1 793 aa22.14■■□□□ 1.13
CDK11A-214ENST00000474916 WWC3Q9ULE0 1092 aa22.14■■□□□ 1.13
CDK11A-214ENST00000474916 CD2APQ9Y5K6 639 aa22.14■■□□□ 1.13
CDK11A-214ENST00000474916 KIF13BQ9NQT8 1826 aa22.14■■□□□ 1.13
CDK11A-214ENST00000474916 MMP10P09238 476 aa22.13■■□□□ 1.13
CDK11A-214ENST00000474916 PHACTR3Q96KR7 559 aa22.13■■□□□ 1.13
CDK11A-214ENST00000474916 N4BP2Q86UW6 1770 aaPredicted RBP22.12■■□□□ 1.13
CDK11A-214ENST00000474916 INTS5Q6P9B9 1019 aaKnown RBP22.12■■□□□ 1.13
CDK11A-214ENST00000474916 RSPH6AQ9H0K4 717 aa22.12■■□□□ 1.13
CDK11A-214ENST00000474916 GYS1P13807 737 aa22.11■■□□□ 1.13
CDK11A-214ENST00000474916 IL17REQ8NFR9 667 aa22.11■■□□□ 1.13
CDK11A-214ENST00000474916 SRP68Q9UHB9 627 aaKnown RBP22.11■■□□□ 1.13
CDK11A-214ENST00000474916 GIGYF1O75420 1035 aaPredicted RBP22.1■■□□□ 1.13
CDK11A-214ENST00000474916 PRKAR2BP31323 418 aa22.1■■□□□ 1.13
CDK11A-214ENST00000474916 ADRA2BP18089 450 aa22.09■■□□□ 1.13
CDK11A-214ENST00000474916 RFC4P35249 363 aa22.08■■□□□ 1.13
CDK11A-214ENST00000474916 CFAP53Q96M91 514 aa22.08■■□□□ 1.13
CDK11A-214ENST00000474916 CYP19A1P11511 503 aaPredicted RBP22.07■■□□□ 1.12
CDK11A-214ENST00000474916 GAS2L2Q8NHY3 880 aa22.07■■□□□ 1.12
CDK11A-214ENST00000474916 GNAT3A8MTJ3 354 aa22.06■■□□□ 1.12
CDK11A-214ENST00000474916 PXDNLA1KZ92 1463 aa22.06■■□□□ 1.12
CDK11A-214ENST00000474916 U2AF1L5P0DN76 240 aaPredicted RBP22.05■■□□□ 1.12
CDK11A-214ENST00000474916 U2AF1Q01081 240 aaKnown RBP eCLIP22.05■■□□□ 1.12
CDK11A-214ENST00000474916 FKBP8Q14318 412 aa22.05■■□□□ 1.12
CDK11A-214ENST00000474916 NLGN1Q8N2Q7 840 aa22.05■■□□□ 1.12
CDK11A-214ENST00000474916 CCDC87Q9NVE4 849 aa22.05■■□□□ 1.12
CDK11A-214ENST00000474916 ZBTB1Q9Y2K1 713 aa22.05■■□□□ 1.12
CDK11A-214ENST00000474916 C10orf71Q711Q0 1435 aa22.05■■□□□ 1.12
CDK11A-214ENST00000474916 SOS1Q07889 1333 aaPredicted RBP22.05■■□□□ 1.12
CDK11A-214ENST00000474916 USP42Q9H9J4 1324 aaKnown RBP22.05■■□□□ 1.12
CDK11A-214ENST00000474916 BRCA1P38398 1863 aaKnown RBP22.04■■□□□ 1.12
CDK11A-214ENST00000474916 CEMIPQ8WUJ3 1361 aa22.03■■□□□ 1.12
CDK11A-214ENST00000474916 DLG5Q8TDM6 1919 aa22.03■■□□□ 1.12
CDK11A-214ENST00000474916 KCNQ3O43525 872 aa22.02■■□□□ 1.12
CDK11A-214ENST00000474916 DDR1Q08345 913 aa22.02■■□□□ 1.12
CDK11A-214ENST00000474916 ZNF496Q96IT1 587 aaPredicted RBP22.02■■□□□ 1.12
CDK11A-214ENST00000474916 AFDNP55196 1824 aaKnown RBP22.01■■□□□ 1.11
CDK11A-214ENST00000474916 GRIN3BO60391 1043 aa22.01■■□□□ 1.11
CDK11A-214ENST00000474916 NUDCQ9Y266 331 aa22.01■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms