RNA–Protein interactions for RNA: ENST00000474348.5

RNF13-212, Transcript of ring finger protein 13, humanhuman

TSL 5

Gene RNF13, Length 1,027 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13-212ENST00000474348 ITPK1Q13572 414 aa12.61□□□□□ -0.39
RNF13-212ENST00000474348 COL13A1Q5TAT6 717 aaPredicted RBP12.61□□□□□ -0.39
RNF13-212ENST00000474348 KLRG1Q96E93 195 aa12.61□□□□□ -0.39
RNF13-212ENST00000474348 CCDC87Q9NVE4 849 aa12.61□□□□□ -0.39
RNF13-212ENST00000474348 C9orf131Q5VYM1 1079 aa12.6□□□□□ -0.39
RNF13-212ENST00000474348 IFNL2Q8IZJ0 200 aa12.6□□□□□ -0.39
RNF13-212ENST00000474348 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.6□□□□□ -0.392e-7■□□□□ 9.4
RNF13-212ENST00000474348 PARP3Q9Y6F1 533 aa12.6□□□□□ -0.39
RNF13-212ENST00000474348 DOT1LQ8TEK3 1739 aa12.59□□□□□ -0.39
RNF13-212ENST00000474348 FLT4P35916 1363 aa12.59□□□□□ -0.39
RNF13-212ENST00000474348 CAPN15O75808 1086 aa12.59□□□□□ -0.39
RNF13-212ENST00000474348 RFC4P35249 363 aa12.59□□□□□ -0.39
RNF13-212ENST00000474348 ARHGEF1Q92888 912 aaKnown RBP12.59□□□□□ -0.39
RNF13-212ENST00000474348 ATG3Q9NT62 314 aa12.59□□□□□ -0.39
RNF13-212ENST00000474348 PIM2Q9P1W9 311 aa12.59□□□□□ -0.39
RNF13-212ENST00000474348 TUBGCP6Q96RT7 1819 aa12.59□□□□□ -0.39
RNF13-212ENST00000474348 KDM2BQ8NHM5 1336 aa12.59□□□□□ -0.39
RNF13-212ENST00000474348 KIF24Q5T7B8 1368 aa12.58□□□□□ -0.4
RNF13-212ENST00000474348 HTRA3P83110 453 aa12.58□□□□□ -0.4
RNF13-212ENST00000474348 RC3H1Q5TC82 1133 aaKnown RBP12.58□□□□□ -0.4
RNF13-212ENST00000474348 JMYQ8N9B5 988 aa12.58□□□□□ -0.4
RNF13-212ENST00000474348 RBM42Q9BTD8 480 aaKnown RBP12.58□□□□□ -0.4
RNF13-212ENST00000474348 RRAGCQ9HB90 399 aa12.58□□□□□ -0.4
RNF13-212ENST00000474348 FAM208AQ9UK61 1670 aaKnown RBP12.57□□□□□ -0.4
RNF13-212ENST00000474348 TNS4Q8IZW8 715 aa12.57□□□□□ -0.4
RNF13-212ENST00000474348 EMILIN1Q9Y6C2 1016 aa12.57□□□□□ -0.4
RNF13-212ENST00000474348 TONSLQ96HA7 1378 aa12.56□□□□□ -0.4
RNF13-212ENST00000474348 RPS6KA4O75676 772 aa12.56□□□□□ -0.4
RNF13-212ENST00000474348 GYS1P13807 737 aa12.56□□□□□ -0.4
RNF13-212ENST00000474348 PHKG2P15735 406 aa12.56□□□□□ -0.4
RNF13-212ENST00000474348 KCNA3P22001 575 aa12.56□□□□□ -0.4
RNF13-212ENST00000474348 CDCA8Q53HL2 280 aa12.56□□□□□ -0.4
RNF13-212ENST00000474348 DALRD3Q5D0E6 543 aaKnown RBP12.56□□□□□ -0.4
RNF13-212ENST00000474348 EYA1Q99502 592 aa12.56□□□□□ -0.4
RNF13-212ENST00000474348 PXDNLA1KZ92 1463 aa12.55□□□□□ -0.4
RNF13-212ENST00000474348 C4BP0C0L5 1744 aa12.55□□□□□ -0.4
RNF13-212ENST00000474348 ERVV-2B6SEH9 535 aa12.55□□□□□ -0.4
RNF13-212ENST00000474348 WASHC2AQ641Q2 1341 aa12.55□□□□□ -0.4
RNF13-212ENST00000474348 C5P01031 1676 aa12.54□□□□□ -0.4
RNF13-212ENST00000474348 PRELPP51888 382 aa12.54□□□□□ -0.4
RNF13-212ENST00000474348 SMC1BQ8NDV3 1235 aa12.54□□□□□ -0.4
RNF13-212ENST00000474348 RNF181Q9P0P0 153 aa12.54□□□□□ -0.4
RNF13-212ENST00000474348 CARD14Q9BXL6 1004 aa12.53□□□□□ -0.4
RNF13-212ENST00000474348 HSP90AB1P08238 724 aaKnown RBP12.52□□□□□ -0.41
RNF13-212ENST00000474348 CABP4P57796 275 aa12.52□□□□□ -0.41
RNF13-212ENST00000474348 DCAF5Q96JK2 942 aa12.52□□□□□ -0.41
RNF13-212ENST00000474348 SLC4A9Q96Q91 983 aa12.52□□□□□ -0.41
RNF13-212ENST00000474348 PLEKHG2Q9H7P9 1386 aa12.52□□□□□ -0.41
RNF13-212ENST00000474348 PTCD1O75127 700 aaKnown RBP12.5□□□□□ -0.41
RNF13-212ENST00000474348 VEGFAP15692 232 aaPredicted RBP12.5□□□□□ -0.41
RNF13-212ENST00000474348 CACNB1Q02641 598 aaPredicted RBP12.5□□□□□ -0.41
RNF13-212ENST00000474348 PLEKHO1Q53GL0 409 aaPredicted RBP12.5□□□□□ -0.41
RNF13-212ENST00000474348 POLKQ9UBT6 870 aa12.5□□□□□ -0.41
RNF13-212ENST00000474348 CNTNAP4Q9C0A0 1308 aa12.5□□□□□ -0.41
RNF13-212ENST00000474348 C10orf71Q711Q0 1435 aa12.5□□□□□ -0.41
RNF13-212ENST00000474348 RGPD2P0DJD1 1756 aa12.5□□□□□ -0.41
RNF13-212ENST00000474348 CHRNA5P30532 468 aa12.49□□□□□ -0.41
RNF13-212ENST00000474348 FKBP8Q14318 412 aa12.49□□□□□ -0.41
RNF13-212ENST00000474348 MTHFSP49914 203 aa12.48□□□□□ -0.41
RNF13-212ENST00000474348 SRP68Q9UHB9 627 aaKnown RBP12.48□□□□□ -0.41
RNF13-212ENST00000474348 TAF1LQ8IZX4 1826 aa12.48□□□□□ -0.41
RNF13-212ENST00000474348 ZPR1O75312 459 aa12.47□□□□□ -0.41
RNF13-212ENST00000474348 TM4SF1P30408 202 aa12.47□□□□□ -0.41
RNF13-212ENST00000474348 TNNT2P45379 298 aaPredicted RBP12.47□□□□□ -0.41
RNF13-212ENST00000474348 CRKLP46109 303 aaKnown RBP12.47□□□□□ -0.41
RNF13-212ENST00000474348 EIF4A2Q14240 407 aaKnown RBP12.47□□□□□ -0.41
RNF13-212ENST00000474348 AMOTQ4VCS5 1084 aa12.47□□□□□ -0.41
RNF13-212ENST00000474348 NFATC2IPQ8NCF5 419 aa12.47□□□□□ -0.41
RNF13-212ENST00000474348 RNF39Q9H2S5 420 aa12.47□□□□□ -0.41
RNF13-212ENST00000474348 CICQ96RK0 1608 aaPredicted RBP12.47□□□□□ -0.41
RNF13-212ENST00000474348 UBR3Q6ZT12 1888 aa12.46□□□□□ -0.41
RNF13-212ENST00000474348 GLTPD2A6NH11 291 aa12.46□□□□□ -0.41
RNF13-212ENST00000474348 LMNB1P20700 586 aa12.46□□□□□ -0.41
RNF13-212ENST00000474348 DDR1Q08345 913 aa12.46□□□□□ -0.41
RNF13-212ENST00000474348 ZNF530Q6P9A1 599 aaPredicted RBP12.46□□□□□ -0.41
RNF13-212ENST00000474348 KCPQ6ZWJ8 1503 aa12.46□□□□□ -0.42
RNF13-212ENST00000474348 NCAPD2Q15021 1401 aa12.45□□□□□ -0.42
RNF13-212ENST00000474348 ZC3H4Q9UPT8 1303 aaKnown RBP12.45□□□□□ -0.42
RNF13-212ENST00000474348 HSPA1AP0DMV8 641 aaKnown RBP12.45□□□□□ -0.42
RNF13-212ENST00000474348 HSPA1BP0DMV9 641 aaKnown RBP12.45□□□□□ -0.42
RNF13-212ENST00000474348 C1orf141Q5JVX7 400 aa12.45□□□□□ -0.42
RNF13-212ENST00000474348 DPY19L2Q6NUT2 758 aa12.45□□□□□ -0.42
RNF13-212ENST00000474348 TOGARAM1Q9Y4F4 1720 aa12.45□□□□□ -0.42
RNF13-212ENST00000474348 KDRP35968 1356 aa12.44□□□□□ -0.42
RNF13-212ENST00000474348 USP42Q9H9J4 1324 aaKnown RBP12.44□□□□□ -0.42
RNF13-212ENST00000474348 POLRMTO00411 1230 aaKnown RBP12.44□□□□□ -0.42
RNF13-212ENST00000474348 ZBTB22O15209 634 aa12.43□□□□□ -0.42
RNF13-212ENST00000474348 USPL1Q5W0Q7 1092 aa12.43□□□□□ -0.42
RNF13-212ENST00000474348 INTS5Q6P9B9 1019 aaKnown RBP12.43□□□□□ -0.42
RNF13-212ENST00000474348 TTLL6Q8N841 843 aa12.43□□□□□ -0.42
RNF13-212ENST00000474348 ITGB4P16144 1822 aa12.42□□□□□ -0.42
RNF13-212ENST00000474348 PCNTO95613 3336 aa12.42□□□□□ -0.42
RNF13-212ENST00000474348 H0YIN7 160 aa12.42□□□□□ -0.42
RNF13-212ENST00000474348 RASSF7Q02833 373 aa12.42□□□□□ -0.42
RNF13-212ENST00000474348 MAP2P11137 1827 aaKnown RBP12.41□□□□□ -0.42
RNF13-212ENST00000474348 N4BP2Q86UW6 1770 aaPredicted RBP12.41□□□□□ -0.42
RNF13-212ENST00000474348 SERPINB2P05120 415 aa12.4□□□□□ -0.42
RNF13-212ENST00000474348 NFIXQ14938 502 aa12.4□□□□□ -0.42
RNF13-212ENST00000474348 C2CD5Q86YS7 1000 aa12.4□□□□□ -0.42
RNF13-212ENST00000474348 POLR3GLQ9BT43 218 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms