RNA–Protein interactions for RNA: ENST00000474270.1

ABCD4-207, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 5

Gene ABCD4, Length 794 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-207ENST00000474270 AK7Q96M32 723 aa17.43■□□□□ 0.38
ABCD4-207ENST00000474270 PHKG2P15735 406 aa17.42■□□□□ 0.38
ABCD4-207ENST00000474270 FLAD1Q8NFF5 587 aa17.42■□□□□ 0.38
ABCD4-207ENST00000474270 SMARCC1Q92922 1105 aaPredicted RBP17.42■□□□□ 0.38
ABCD4-207ENST00000474270 MYH14Q7Z406 1995 aaKnown RBP17.41■□□□□ 0.38
ABCD4-207ENST00000474270 PHF14O94880 888 aa17.41■□□□□ 0.38
ABCD4-207ENST00000474270 SMIM5Q71RC9 77 aa17.41■□□□□ 0.38
ABCD4-207ENST00000474270 IFNL2Q8IZJ0 200 aa17.41■□□□□ 0.38
ABCD4-207ENST00000474270 TMOD3Q9NYL9 352 aa17.41■□□□□ 0.38
ABCD4-207ENST00000474270 ZNF831Q5JPB2 1677 aa17.41■□□□□ 0.38
ABCD4-207ENST00000474270 HMGB2P26583 209 aaKnown RBP17.4■□□□□ 0.38
ABCD4-207ENST00000474270 MORC1Q86VD1 984 aa17.4■□□□□ 0.38
ABCD4-207ENST00000474270 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.4■□□□□ 0.38
ABCD4-207ENST00000474270 C4AP0C0L4 1744 aa17.4■□□□□ 0.38
ABCD4-207ENST00000474270 IGSF1Q8N6C5 1336 aa17.4■□□□□ 0.38
ABCD4-207ENST00000474270 AMIGO3Q86WK7 504 aa17.39■□□□□ 0.37
ABCD4-207ENST00000474270 ASAP1Q9ULH1 1129 aa17.39■□□□□ 0.37
ABCD4-207ENST00000474270 WWC3Q9ULE0 1092 aa17.38■□□□□ 0.37
ABCD4-207ENST00000474270 CD2APQ9Y5K6 639 aa17.38■□□□□ 0.37
ABCD4-207ENST00000474270 N4BP2Q86UW6 1770 aaPredicted RBP17.38■□□□□ 0.37
ABCD4-207ENST00000474270 LOC102724428A0A0B4J2F2 783 aa17.37■□□□□ 0.37
ABCD4-207ENST00000474270 SIK1P57059 783 aa17.37■□□□□ 0.37
ABCD4-207ENST00000474270 LINC00116Q8NCU8 138 aa17.37■□□□□ 0.37
ABCD4-207ENST00000474270 TJP1Q07157 1748 aa17.37■□□□□ 0.37
ABCD4-207ENST00000474270 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.36■□□□□ 0.37
ABCD4-207ENST00000474270 AEBP1Q8IUX7 1158 aa17.36■□□□□ 0.37
ABCD4-207ENST00000474270 ZBED9Q6R2W3 1325 aa17.36■□□□□ 0.37
ABCD4-207ENST00000474270 KIF13BQ9NQT8 1826 aa17.35■□□□□ 0.37
ABCD4-207ENST00000474270 HNRNPUQ00839 825 aaKnown RBP eCLIP17.35■□□□□ 0.37
ABCD4-207ENST00000474270 ITPK1Q13572 414 aa17.35■□□□□ 0.37
ABCD4-207ENST00000474270 ATG3Q9NT62 314 aa17.35■□□□□ 0.37
ABCD4-207ENST00000474270 KDM6AO15550 1401 aaPredicted RBP17.34■□□□□ 0.37
ABCD4-207ENST00000474270 ATP6V1AP38606 617 aa17.34■□□□□ 0.37
ABCD4-207ENST00000474270 AMER1Q5JTC6 1135 aaPredicted RBP17.34■□□□□ 0.37
ABCD4-207ENST00000474270 ZNF530Q6P9A1 599 aaPredicted RBP17.34■□□□□ 0.37
ABCD4-207ENST00000474270 PNISRQ8TF01 805 aaKnown RBP17.34■□□□□ 0.37
ABCD4-207ENST00000474270 KIAA1551Q9HCM1 1747 aa17.33■□□□□ 0.37
ABCD4-207ENST00000474270 SSFA2P28290 1259 aa17.33■□□□□ 0.36
ABCD4-207ENST00000474270 PLEKHO1Q53GL0 409 aaPredicted RBP17.33■□□□□ 0.36
ABCD4-207ENST00000474270 GTF3C3Q9Y5Q9 886 aa17.33■□□□□ 0.36
ABCD4-207ENST00000474270 ATP10DQ9P241 1426 aa17.32■□□□□ 0.36
ABCD4-207ENST00000474270 PLEKHG2Q9H7P9 1386 aa17.32■□□□□ 0.36
ABCD4-207ENST00000474270 GNPATO15228 680 aa17.32■□□□□ 0.36
ABCD4-207ENST00000474270 SULT6B1Q6IMI4 303 aa17.32■□□□□ 0.36
ABCD4-207ENST00000474270 RBM42Q9BTD8 480 aaKnown RBP17.32■□□□□ 0.36
ABCD4-207ENST00000474270 KDRP35968 1356 aa17.31■□□□□ 0.36
ABCD4-207ENST00000474270 FAM9BQ8IZU0 186 aa17.31■□□□□ 0.36
ABCD4-207ENST00000474270 ZNF526Q8TF50 670 aaPredicted RBP17.31■□□□□ 0.36
ABCD4-207ENST00000474270 CICQ96RK0 1608 aaPredicted RBP17.3■□□□□ 0.36
ABCD4-207ENST00000474270 DCAF5Q96JK2 942 aa17.3■□□□□ 0.36
ABCD4-207ENST00000474270 BRCA1P38398 1863 aaKnown RBP17.3■□□□□ 0.36
ABCD4-207ENST00000474270 ERVV-2B6SEH9 535 aa17.29■□□□□ 0.36
ABCD4-207ENST00000474270 HSP90AB1P08238 724 aaKnown RBP17.29■□□□□ 0.36
ABCD4-207ENST00000474270 CABP4P57796 275 aa17.29■□□□□ 0.36
ABCD4-207ENST00000474270 CNGB1Q14028 1251 aaPredicted RBP17.29■□□□□ 0.36
ABCD4-207ENST00000474270 AMOTQ4VCS5 1084 aa17.29■□□□□ 0.36
ABCD4-207ENST00000474270 C1orf141Q5JVX7 400 aa17.29■□□□□ 0.36
ABCD4-207ENST00000474270 SLC4A9Q96Q91 983 aa17.29■□□□□ 0.36
ABCD4-207ENST00000474270 GPBP1L1Q9HC44 474 aaPredicted RBP17.29■□□□□ 0.36
ABCD4-207ENST00000474270 IL13P35225 146 aa17.28■□□□□ 0.36
ABCD4-207ENST00000474270 MTHFSP49914 203 aa17.28■□□□□ 0.36
ABCD4-207ENST00000474270 CCDC184Q52MB2 194 aa17.28■□□□□ 0.36
ABCD4-207ENST00000474270 CC2D1BQ5T0F9 858 aaKnown RBP17.27■□□□□ 0.36
ABCD4-207ENST00000474270 ADAMTS7Q9UKP4 1686 aa17.26■□□□□ 0.35
ABCD4-207ENST00000474270 UBR2Q8IWV8 1755 aa17.26■□□□□ 0.35
ABCD4-207ENST00000474270 MMP10P09238 476 aa17.26■□□□□ 0.35
ABCD4-207ENST00000474270 SIPA1L3O60292 1781 aaPredicted RBP17.25■□□□□ 0.35
ABCD4-207ENST00000474270 PTCD1O75127 700 aaKnown RBP17.25■□□□□ 0.35
ABCD4-207ENST00000474270 HMOX1P09601 288 aa17.25■□□□□ 0.35
ABCD4-207ENST00000474270 TRAPPC3LQ5T215 181 aa17.25■□□□□ 0.35
ABCD4-207ENST00000474270 RTCBQ9Y3I0 505 aaKnown RBP17.25■□□□□ 0.35
ABCD4-207ENST00000474270 AFDNP55196 1824 aaKnown RBP17.25■□□□□ 0.35
ABCD4-207ENST00000474270 NGEFQ8N5V2 710 aa17.24■□□□□ 0.35
ABCD4-207ENST00000474270 NFATC2IPQ8NCF5 419 aa17.24■□□□□ 0.35
ABCD4-207ENST00000474270 NEFLP07196 543 aa17.23■□□□□ 0.35
ABCD4-207ENST00000474270 PPP2R1AP30153 589 aa17.23■□□□□ 0.35
ABCD4-207ENST00000474270 ADCY9O60503 1353 aa17.23■□□□□ 0.35
ABCD4-207ENST00000474270 ARFGEF1Q9Y6D6 1849 aa17.23■□□□□ 0.35
ABCD4-207ENST00000474270 CNTNAP4Q9C0A0 1308 aa17.21■□□□□ 0.35
ABCD4-207ENST00000474270 MRC1P22897 1456 aa17.21■□□□□ 0.35
ABCD4-207ENST00000474270 ARHGEF1Q92888 912 aaKnown RBP17.21■□□□□ 0.35
ABCD4-207ENST00000474270 COL3A1P02461 1466 aaPredicted RBP17.2■□□□□ 0.34
ABCD4-207ENST00000474270 A0A0G2JLW4 131 aa17.2■□□□□ 0.34
ABCD4-207ENST00000474270 RFC4P35249 363 aa17.2■□□□□ 0.34
ABCD4-207ENST00000474270 AKAP4Q5JQC9 854 aa17.2■□□□□ 0.34
ABCD4-207ENST00000474270 RC3H1Q5TC82 1133 aaKnown RBP17.2■□□□□ 0.34
ABCD4-207ENST00000474270 NLGN1Q8N2Q7 840 aa17.2■□□□□ 0.34
ABCD4-207ENST00000474270 LGR6Q9HBX8 967 aa17.2■□□□□ 0.34
ABCD4-207ENST00000474270 BCS1LQ9Y276 419 aa17.2■□□□□ 0.34
ABCD4-207ENST00000474270 DIAPH1O60610 1272 aaKnown RBP17.19■□□□□ 0.34
ABCD4-207ENST00000474270 WDR43Q15061 677 aaKnown RBP eCLIP17.19■□□□□ 0.34
ABCD4-207ENST00000474270 CCDC88AQ3V6T2 1871 aa17.18■□□□□ 0.34
ABCD4-207ENST00000474270 KCPQ6ZWJ8 1503 aa17.18■□□□□ 0.34
ABCD4-207ENST00000474270 RPS6KA4O75676 772 aa17.18■□□□□ 0.34
ABCD4-207ENST00000474270 CRKLP46109 303 aaKnown RBP17.18■□□□□ 0.34
ABCD4-207ENST00000474270 TGFB2P61812 414 aa17.18■□□□□ 0.34
ABCD4-207ENST00000474270 ERICH6BQ5W0A0 696 aa17.18■□□□□ 0.34
ABCD4-207ENST00000474270 CCDC87Q9NVE4 849 aa17.18■□□□□ 0.34
ABCD4-207ENST00000474270 PXDNLA1KZ92 1463 aa17.18■□□□□ 0.34
ABCD4-207ENST00000474270 GYS1P13807 737 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms