RNA–Protein interactions for RNA: ENST00000473916.1

VARS2-206, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 2,000 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-206ENST00000473916 F6X3S4 739 aa22.81■■□□□ 1.24
VARS2-206ENST00000473916 PHKG2P15735 406 aa22.81■■□□□ 1.24
VARS2-206ENST00000473916 PDE4AP27815 886 aa22.81■■□□□ 1.24
VARS2-206ENST00000473916 TOM1L2Q6ZVM7 507 aa22.8■■□□□ 1.24
VARS2-206ENST00000473916 AHDC1Q5TGY3 1603 aaPredicted RBP22.79■■□□□ 1.24
VARS2-206ENST00000473916 CYP27B1O15528 508 aa22.79■■□□□ 1.24
VARS2-206ENST00000473916 HDAC1Q13547 482 aaPredicted RBP22.79■■□□□ 1.24
VARS2-206ENST00000473916 CCDC30Q5VVM6 783 aa22.79■■□□□ 1.24
VARS2-206ENST00000473916 INTS3Q68E01 1043 aaKnown RBP22.79■■□□□ 1.24
VARS2-206ENST00000473916 STK31Q9BXU1 1019 aa22.79■■□□□ 1.24
VARS2-206ENST00000473916 STRN4Q9NRL3 753 aa22.79■■□□□ 1.24
VARS2-206ENST00000473916 PDZRN3Q9UPQ7 1066 aa22.79■■□□□ 1.24
VARS2-206ENST00000473916 SPG7Q9UQ90 795 aa22.79■■□□□ 1.24
VARS2-206ENST00000473916 PARP4Q9UKK3 1724 aaKnown RBP22.78■■□□□ 1.24
VARS2-206ENST00000473916 HDGFL1Q5TGJ6 251 aa22.78■■□□□ 1.24
VARS2-206ENST00000473916 LARP1Q6PKG0 1096 aaKnown RBP22.78■■□□□ 1.24
VARS2-206ENST00000473916 EIF2S2P20042 333 aaKnown RBP22.77■■□□□ 1.24
VARS2-206ENST00000473916 BACH2Q9BYV9 841 aa22.77■■□□□ 1.24
VARS2-206ENST00000473916 FLIIQ13045 1269 aa22.76■■□□□ 1.23
VARS2-206ENST00000473916 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.76■■□□□ 1.23
VARS2-206ENST00000473916 PRAMEF22A3QJZ6 481 aa22.75■■□□□ 1.23
VARS2-206ENST00000473916 SLC4A10Q6U841 1118 aa22.75■■□□□ 1.23
VARS2-206ENST00000473916 SIRT2Q8IXJ6 389 aa22.75■■□□□ 1.23
VARS2-206ENST00000473916 IFNL2Q8IZJ0 200 aa22.75■■□□□ 1.23
VARS2-206ENST00000473916 SOS1Q07889 1333 aaPredicted RBP22.74■■□□□ 1.23
VARS2-206ENST00000473916 SHANK3Q9BYB0 1731 aa22.74■■□□□ 1.23
VARS2-206ENST00000473916 SLC39A6Q13433 755 aa22.74■■□□□ 1.23
VARS2-206ENST00000473916 PHAXQ9H814 394 aaKnown RBP22.74■■□□□ 1.23
VARS2-206ENST00000473916 COL16A1Q07092 1604 aaPredicted RBP22.73■■□□□ 1.23
VARS2-206ENST00000473916 ANXA1P04083 346 aa22.73■■□□□ 1.23
VARS2-206ENST00000473916 FKBP5Q13451 457 aaPredicted RBP22.73■■□□□ 1.23
VARS2-206ENST00000473916 SLC52A2Q9HAB3 445 aa22.73■■□□□ 1.23
VARS2-206ENST00000473916 C5P01031 1676 aa22.73■■□□□ 1.23
VARS2-206ENST00000473916 COL22A1Q8NFW1 1626 aaPredicted RBP22.72■■□□□ 1.23
VARS2-206ENST00000473916 PHLPP1O60346 1717 aa22.72■■□□□ 1.23
VARS2-206ENST00000473916 NFATC2IPQ8NCF5 419 aa22.72■■□□□ 1.23
VARS2-206ENST00000473916 MEIS3Q99687 375 aa22.72■■□□□ 1.23
VARS2-206ENST00000473916 CHPF2Q9P2E5 772 aa22.72■■□□□ 1.23
VARS2-206ENST00000473916 HEG1Q9ULI3 1381 aa22.71■■□□□ 1.23
VARS2-206ENST00000473916 EVA1CP58658 441 aa22.71■■□□□ 1.23
VARS2-206ENST00000473916 SMC5Q8IY18 1101 aa22.71■■□□□ 1.23
VARS2-206ENST00000473916 USP35Q9P2H5 1018 aa22.71■■□□□ 1.23
VARS2-206ENST00000473916 N4BP2Q86UW6 1770 aaPredicted RBP22.71■■□□□ 1.23
VARS2-206ENST00000473916 MRC1P22897 1456 aa22.71■■□□□ 1.23
VARS2-206ENST00000473916 CARD10Q9BWT7 1032 aa22.7■■□□□ 1.23
VARS2-206ENST00000473916 BTG4Q9NY30 223 aa22.7■■□□□ 1.23
VARS2-206ENST00000473916 GIGYF1O75420 1035 aaPredicted RBP22.7■■□□□ 1.22
VARS2-206ENST00000473916 C8orf34Q49A92 452 aa22.7■■□□□ 1.22
VARS2-206ENST00000473916 CHMP4BQ9H444 224 aaKnown RBP22.7■■□□□ 1.22
VARS2-206ENST00000473916 HOXB7P09629 217 aa22.69■■□□□ 1.22
VARS2-206ENST00000473916 ATP10DQ9P241 1426 aa22.69■■□□□ 1.22
VARS2-206ENST00000473916 PLEKHG2Q9H7P9 1386 aa22.69■■□□□ 1.22
VARS2-206ENST00000473916 DCAF5Q96JK2 942 aa22.69■■□□□ 1.22
VARS2-206ENST00000473916 COL14A1Q05707 1796 aaKnown RBP22.68■■□□□ 1.22
VARS2-206ENST00000473916 ZCRB1Q8TBF4 217 aaKnown RBP22.68■■□□□ 1.22
VARS2-206ENST00000473916 IL2RBP14784 551 aa22.67■■□□□ 1.22
VARS2-206ENST00000473916 PROSER3Q2NL68 480 aa22.67■■□□□ 1.22
VARS2-206ENST00000473916 ZNF790Q6PG37 636 aa22.67■■□□□ 1.22
VARS2-206ENST00000473916 PIP4K2BP78356 416 aa22.67■■□□□ 1.22
VARS2-206ENST00000473916 CCT4P50991 539 aaKnown RBP22.65■■□□□ 1.22
VARS2-206ENST00000473916 FAM161AQ3B820 660 aa22.65■■□□□ 1.22
VARS2-206ENST00000473916 PCDH11XQ9BZA7 1347 aa22.65■■□□□ 1.22
VARS2-206ENST00000473916 PCDH11YQ9BZA8 1340 aa22.65■■□□□ 1.22
VARS2-206ENST00000473916 DDX54Q8TDD1 881 aaKnown RBP22.64■■□□□ 1.21
VARS2-206ENST00000473916 NUCB1Q02818 461 aa22.63■■□□□ 1.21
VARS2-206ENST00000473916 CEP85Q6P2H3 762 aa22.63■■□□□ 1.21
VARS2-206ENST00000473916 ZNF496Q96IT1 587 aaPredicted RBP22.63■■□□□ 1.21
VARS2-206ENST00000473916 LNPKQ9C0E8 428 aa22.63■■□□□ 1.21
VARS2-206ENST00000473916 NPM2Q86SE8 214 aaKnown RBP22.62■■□□□ 1.21
VARS2-206ENST00000473916 TOGARAM1Q9Y4F4 1720 aa22.62■■□□□ 1.21
VARS2-206ENST00000473916 PLCH1Q4KWH8 1693 aa22.62■■□□□ 1.21
VARS2-206ENST00000473916 GLI3P10071 1580 aa22.62■■□□□ 1.21
VARS2-206ENST00000473916 HSP90AB1P08238 724 aaKnown RBP22.62■■□□□ 1.21
VARS2-206ENST00000473916 CABP4P57796 275 aa22.62■■□□□ 1.21
VARS2-206ENST00000473916 PXDNLA1KZ92 1463 aa22.61■■□□□ 1.21
VARS2-206ENST00000473916 ANKRD44Q8N8A2 993 aa22.61■■□□□ 1.21
VARS2-206ENST00000473916 ADAMTS2O95450 1211 aa22.6■■□□□ 1.21
VARS2-206ENST00000473916 DBF4Q9UBU7 674 aaPredicted RBP22.6■■□□□ 1.21
VARS2-206ENST00000473916 ADCY9O60503 1353 aa22.6■■□□□ 1.21
VARS2-206ENST00000473916 PI4KAP2A4QPH2 592 aa22.59■■□□□ 1.21
VARS2-206ENST00000473916 MSH5O43196 834 aa22.59■■□□□ 1.21
VARS2-206ENST00000473916 CHD1LQ86WJ1 897 aa22.59■■□□□ 1.21
VARS2-206ENST00000473916 PI4KAP1Q8N8J0 262 aa22.59■■□□□ 1.21
VARS2-206ENST00000473916 ANKRD45Q5TZF3 282 aa22.58■■□□□ 1.21
VARS2-206ENST00000473916 GCC1Q96CN9 775 aa22.58■■□□□ 1.21
VARS2-206ENST00000473916 PDIA6Q15084 440 aa22.58■■□□□ 1.2
VARS2-206ENST00000473916 TTC5Q8N0Z6 440 aa22.57■■□□□ 1.2
VARS2-206ENST00000473916 WNK3Q9BYP7 1800 aa22.56■■□□□ 1.2
VARS2-206ENST00000473916 NUTM2BA6NNL0 878 aaPredicted RBP22.56■■□□□ 1.2
VARS2-206ENST00000473916 NUTM2EB1AL46 878 aaPredicted RBP22.56■■□□□ 1.2
VARS2-206ENST00000473916 TOM1O60784 492 aa22.56■■□□□ 1.2
VARS2-206ENST00000473916 PIP4K2AP48426 406 aaPredicted RBP22.56■■□□□ 1.2
VARS2-206ENST00000473916 NKX1-1Q15270 411 aaPredicted RBP22.56■■□□□ 1.2
VARS2-206ENST00000473916 NUTM2AQ8IVF1 878 aaPredicted RBP22.56■■□□□ 1.2
VARS2-206ENST00000473916 USP44Q9H0E7 712 aa22.56■■□□□ 1.2
VARS2-206ENST00000473916 USP16Q9Y5T5 823 aa22.56■■□□□ 1.2
VARS2-206ENST00000473916 UBR2Q8IWV8 1755 aa22.56■■□□□ 1.2
VARS2-206ENST00000473916 NRAPQ86VF7 1730 aa22.56■■□□□ 1.2
VARS2-206ENST00000473916 RPAP2Q8IXW5 612 aaPredicted RBP22.55■■□□□ 1.2
VARS2-206ENST00000473916 DNAAF4Q8WXU2 420 aa22.55■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms