RNA–Protein interactions for RNA: ENST00000472116.1

CDHR3-209, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 993 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-209ENST00000472116 PCDH11XQ9BZA7 1347 aa14.67□□□□□ -0.06
CDHR3-209ENST00000472116 PCDH11YQ9BZA8 1340 aa14.67□□□□□ -0.06
CDHR3-209ENST00000472116 AMPHP49418 695 aa14.67□□□□□ -0.06
CDHR3-209ENST00000472116 HDGFL2Q7Z4V5 671 aaPredicted RBP14.67□□□□□ -0.06
CDHR3-209ENST00000472116 NLGN1Q8N2Q7 840 aa14.67□□□□□ -0.06
CDHR3-209ENST00000472116 ZC3H4Q9UPT8 1303 aaKnown RBP14.66□□□□□ -0.06
CDHR3-209ENST00000472116 CTCFP49711 727 aaPredicted RBP14.66□□□□□ -0.06
CDHR3-209ENST00000472116 MLLT1Q03111 559 aaPredicted RBP14.66□□□□□ -0.06
CDHR3-209ENST00000472116 DALRD3Q5D0E6 543 aaKnown RBP14.66□□□□□ -0.06
CDHR3-209ENST00000472116 PARP3Q9Y6F1 533 aa14.66□□□□□ -0.06
CDHR3-209ENST00000472116 MAP2P11137 1827 aaKnown RBP14.65□□□□□ -0.06
CDHR3-209ENST00000472116 FOXN1O15353 648 aa14.65□□□□□ -0.06
CDHR3-209ENST00000472116 TATP17735 454 aaPredicted RBP14.65□□□□□ -0.06
CDHR3-209ENST00000472116 TMF1P82094 1093 aa14.65□□□□□ -0.06
CDHR3-209ENST00000472116 MKRN1Q9UHC7 482 aaKnown RBP14.65□□□□□ -0.06
CDHR3-209ENST00000472116 DCAF5Q96JK2 942 aa14.64□□□□□ -0.07
CDHR3-209ENST00000472116 SMG6Q86US8 1419 aaKnown RBP14.64□□□□□ -0.07
CDHR3-209ENST00000472116 SBNO2Q9Y2G9 1366 aa14.63□□□□□ -0.07
CDHR3-209ENST00000472116 LOC102724428A0A0B4J2F2 783 aa14.63□□□□□ -0.07
CDHR3-209ENST00000472116 HOXC9P31274 260 aa14.63□□□□□ -0.07
CDHR3-209ENST00000472116 SIK1P57059 783 aa14.63□□□□□ -0.07
CDHR3-209ENST00000472116 LINC00116Q8NCU8 138 aa14.63□□□□□ -0.07
CDHR3-209ENST00000472116 TMC1Q8TDI8 760 aa14.63□□□□□ -0.07
CDHR3-209ENST00000472116 CREBZFQ9NS37 354 aa14.63□□□□□ -0.07
CDHR3-209ENST00000472116 EDC4Q6P2E9 1401 aaKnown RBP14.63□□□□□ -0.07
CDHR3-209ENST00000472116 TIAM2Q8IVF5 1701 aa14.63□□□□□ -0.07
CDHR3-209ENST00000472116 TRAPPC3LQ5T215 181 aa14.62□□□□□ -0.07
CDHR3-209ENST00000472116 ABHD8Q96I13 439 aa14.62□□□□□ -0.07
CDHR3-209ENST00000472116 GLTPD2A6NH11 291 aa14.61□□□□□ -0.07
CDHR3-209ENST00000472116 RTCBQ9Y3I0 505 aaKnown RBP14.61□□□□□ -0.07
CDHR3-209ENST00000472116 ATP6V1AP38606 617 aa14.6□□□□□ -0.07
CDHR3-209ENST00000472116 TERF2IPQ9NYB0 399 aa14.6□□□□□ -0.07
CDHR3-209ENST00000472116 CD163L1Q9NR16 1453 aa14.59□□□□□ -0.07
CDHR3-209ENST00000472116 USHBP1Q8N6Y0 703 aa14.59□□□□□ -0.07
CDHR3-209ENST00000472116 COG3Q96JB2 828 aa14.59□□□□□ -0.07
CDHR3-209ENST00000472116 MAP3K19Q56UN5 1328 aa14.59□□□□□ -0.07
CDHR3-209ENST00000472116 CCDC85CA6NKD9 419 aa14.58□□□□□ -0.08
CDHR3-209ENST00000472116 NPM3O75607 178 aaKnown RBP14.58□□□□□ -0.08
CDHR3-209ENST00000472116 LMNB1P20700 586 aa14.58□□□□□ -0.08
CDHR3-209ENST00000472116 KCNA3P22001 575 aa14.58□□□□□ -0.08
CDHR3-209ENST00000472116 RFC4P35249 363 aa14.58□□□□□ -0.08
CDHR3-209ENST00000472116 LBX1P52954 281 aa14.58□□□□□ -0.08
CDHR3-209ENST00000472116 NBPF6Q5VWK0 638 aa14.58□□□□□ -0.08
CDHR3-209ENST00000472116 PIGBQ92521 554 aa14.58□□□□□ -0.08
CDHR3-209ENST00000472116 NBPF4Q96M43 638 aa14.58□□□□□ -0.08
CDHR3-209ENST00000472116 RTL1A6NKG5 1358 aa14.58□□□□□ -0.08
CDHR3-209ENST00000472116 VIRMAQ69YN4 1812 aaKnown RBP14.57□□□□□ -0.08
CDHR3-209ENST00000472116 PDE4DIPQ5VU43 2346 aa14.57□□□□□ -0.08
CDHR3-209ENST00000472116 DPY19L2Q6NUT2 758 aa14.57□□□□□ -0.08
CDHR3-209ENST00000472116 TMOD3Q9NYL9 352 aa14.57□□□□□ -0.08
CDHR3-209ENST00000472116 CNTNAP1P78357 1384 aa14.57□□□□□ -0.08
CDHR3-209ENST00000472116 DICER1Q9UPY3 1922 aaKnown RBP14.55□□□□□ -0.08
CDHR3-209ENST00000472116 RASSF7Q02833 373 aa14.55□□□□□ -0.08
CDHR3-209ENST00000472116 ITPK1Q13572 414 aa14.55□□□□□ -0.08
CDHR3-209ENST00000472116 ROCK2O75116 1388 aaKnown RBP14.55□□□□□ -0.08
CDHR3-209ENST00000472116 CYP27B1O15528 508 aa14.54□□□□□ -0.08
CDHR3-209ENST00000472116 GYS1P13807 737 aa14.54□□□□□ -0.08
CDHR3-209ENST00000472116 CHADLQ6NUI6 762 aa14.54□□□□□ -0.08
CDHR3-209ENST00000472116 KDM6AO15550 1401 aaPredicted RBP14.53□□□□□ -0.08
CDHR3-209ENST00000472116 A0A1W2PP64 1363 aa14.53□□□□□ -0.08
CDHR3-209ENST00000472116 ARHGEF1Q92888 912 aaKnown RBP14.53□□□□□ -0.08
CDHR3-209ENST00000472116 COL5A3P25940 1745 aaPredicted RBP14.52□□□□□ -0.08
CDHR3-209ENST00000472116 CHRNA5P30532 468 aa14.52□□□□□ -0.09
CDHR3-209ENST00000472116 RGS19P49795 217 aa14.52□□□□□ -0.09
CDHR3-209ENST00000472116 CFAP44Q96MT7 982 aa14.52□□□□□ -0.09
CDHR3-209ENST00000472116 SLC12A5Q9H2X9 1139 aa14.52□□□□□ -0.09
CDHR3-209ENST00000472116 ZNF831Q5JPB2 1677 aa14.52□□□□□ -0.09
CDHR3-209ENST00000472116 WBP1LQ9NX94 342 aa14.51□□□□□ -0.09
CDHR3-209ENST00000472116 ASAP1Q9ULH1 1129 aa14.51□□□□□ -0.09
CDHR3-209ENST00000472116 SPG7Q9UQ90 795 aa14.51□□□□□ -0.09
CDHR3-209ENST00000472116 DLEC1Q9Y238 1755 aa14.5□□□□□ -0.09
CDHR3-209ENST00000472116 VEGFBP49765 207 aa14.5□□□□□ -0.09
CDHR3-209ENST00000472116 MYH14Q7Z406 1995 aaKnown RBP14.49□□□□□ -0.09
CDHR3-209ENST00000472116 HSPA8P11142 646 aaKnown RBP14.49□□□□□ -0.09
CDHR3-209ENST00000472116 MAP2K1Q02750 393 aaPredicted RBP14.49□□□□□ -0.09
CDHR3-209ENST00000472116 RC3H1Q5TC82 1133 aaKnown RBP14.49□□□□□ -0.09
CDHR3-209ENST00000472116 CNTNAP4Q9C0A0 1308 aa14.48□□□□□ -0.09
CDHR3-209ENST00000472116 TMEM88BA6NKF7 163 aa14.48□□□□□ -0.09
CDHR3-209ENST00000472116 RPS6KA4O75676 772 aa14.48□□□□□ -0.09
CDHR3-209ENST00000472116 FBLN1P23142 703 aa14.48□□□□□ -0.09
CDHR3-209ENST00000472116 RRS1Q15050 365 aaKnown RBP14.48□□□□□ -0.09
CDHR3-209ENST00000472116 NKX1-1Q15270 411 aaPredicted RBP14.48□□□□□ -0.09
CDHR3-209ENST00000472116 RBM42Q9BTD8 480 aaKnown RBP14.48□□□□□ -0.09
CDHR3-209ENST00000472116 BEGAINQ9BUH8 593 aa14.48□□□□□ -0.09
CDHR3-209ENST00000472116 SCN4AP35499 1836 aa14.47□□□□□ -0.09
CDHR3-209ENST00000472116 AFDNP55196 1824 aaKnown RBP14.47□□□□□ -0.09
CDHR3-209ENST00000472116 POTECB2RU33 542 aa14.46□□□□□ -0.09
CDHR3-209ENST00000472116 ATG3Q9NT62 314 aa14.46□□□□□ -0.09
CDHR3-209ENST00000472116 INSRP06213 1382 aa14.46□□□□□ -0.1
CDHR3-209ENST00000472116 ERFEQ4G0M1 354 aa14.45□□□□□ -0.1
CDHR3-209ENST00000472116 TTLL6Q8N841 843 aa14.45□□□□□ -0.1
CDHR3-209ENST00000472116 KDRP35968 1356 aa14.45□□□□□ -0.1
CDHR3-209ENST00000472116 IQCA1LA6NCM1 817 aa14.44□□□□□ -0.1
CDHR3-209ENST00000472116 DDR1Q08345 913 aa14.44□□□□□ -0.1
CDHR3-209ENST00000472116 LDHDQ86WU2 507 aa14.44□□□□□ -0.1
CDHR3-209ENST00000472116 IFNL2Q8IZJ0 200 aa14.44□□□□□ -0.1
CDHR3-209ENST00000472116 FLT4P35916 1363 aa14.44□□□□□ -0.1
CDHR3-209ENST00000472116 PASKQ96RG2 1323 aa14.43□□□□□ -0.1
CDHR3-209ENST00000472116 FKBP8Q14318 412 aa14.43□□□□□ -0.1
CDHR3-209ENST00000472116 DEFB115Q30KQ5 88 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms