RNA–Protein interactions for RNA: ENST00000472066.1

PRKCB-205, Transcript of protein kinase C beta, humanhuman

TSL 3

Gene PRKCB, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-205ENST00000472066 SMARCC1Q92922 1105 aaPredicted RBP16.22■□□□□ 0.19
PRKCB-205ENST00000472066 TRIM35Q9UPQ4 493 aa16.22■□□□□ 0.19
PRKCB-205ENST00000472066 TNS1Q9HBL0 1735 aaKnown RBP16.22■□□□□ 0.19
PRKCB-205ENST00000472066 TXNRD1Q16881 649 aa16.21■□□□□ 0.19
PRKCB-205ENST00000472066 ADAMTS7Q9UKP4 1686 aa16.21■□□□□ 0.18
PRKCB-205ENST00000472066 THUMPD2Q9BTF0 503 aaKnown RBP16.2■□□□□ 0.18
PRKCB-205ENST00000472066 MRC1P22897 1456 aa16.19■□□□□ 0.18
PRKCB-205ENST00000472066 PALLDQ8WX93 1383 aa16.19■□□□□ 0.18
PRKCB-205ENST00000472066 SENP3-EIF4A1A0A087X0R7 540 aa16.19■□□□□ 0.18
PRKCB-205ENST00000472066 BTBD11A6QL63 1104 aa16.18■□□□□ 0.18
PRKCB-205ENST00000472066 SLC39A6Q13433 755 aa16.18■□□□□ 0.18
PRKCB-205ENST00000472066 TAF7Q15545 349 aaPredicted RBP16.18■□□□□ 0.18
PRKCB-205ENST00000472066 BTAF1O14981 1849 aa16.17■□□□□ 0.18
PRKCB-205ENST00000472066 NCBP3Q53F19 620 aaKnown RBP16.17■□□□□ 0.18
PRKCB-205ENST00000472066 SLC27A3Q5K4L6 730 aa16.17■□□□□ 0.18
PRKCB-205ENST00000472066 LRRC4BQ9NT99 713 aa16.17■□□□□ 0.18
PRKCB-205ENST00000472066 SCN11AQ9UI33 1791 aa16.17■□□□□ 0.18
PRKCB-205ENST00000472066 KCNQ4P56696 695 aa16.16■□□□□ 0.18
PRKCB-205ENST00000472066 CCDC27Q2M243 656 aa16.16■□□□□ 0.18
PRKCB-205ENST00000472066 ZNF790Q6PG37 636 aa16.16■□□□□ 0.18
PRKCB-205ENST00000472066 RBM42Q9BTD8 480 aaKnown RBP16.16■□□□□ 0.18
PRKCB-205ENST00000472066 CCNL1Q9UK58 526 aaPredicted RBP16.16■□□□□ 0.18
PRKCB-205ENST00000472066 ITGB4P16144 1822 aa16.16■□□□□ 0.18
PRKCB-205ENST00000472066 LOC102724428A0A0B4J2F2 783 aa16.15■□□□□ 0.18
PRKCB-205ENST00000472066 PTCD1O75127 700 aaKnown RBP16.15■□□□□ 0.18
PRKCB-205ENST00000472066 SIK1P57059 783 aa16.15■□□□□ 0.18
PRKCB-205ENST00000472066 MIS18AQ9NYP9 233 aa16.15■□□□□ 0.18
PRKCB-205ENST00000472066 SALL2Q9Y467 1007 aaPredicted RBP16.15■□□□□ 0.18
PRKCB-205ENST00000472066 WWC1Q8IX03 1113 aa16.14■□□□□ 0.17
PRKCB-205ENST00000472066 TTC5Q8N0Z6 440 aa16.14■□□□□ 0.17
PRKCB-205ENST00000472066 SLC4A9Q96Q91 983 aa16.14■□□□□ 0.17
PRKCB-205ENST00000472066 KCNQ3O43525 872 aa16.13■□□□□ 0.17
PRKCB-205ENST00000472066 ATP6V1AP38606 617 aa16.13■□□□□ 0.17
PRKCB-205ENST00000472066 CALD1Q05682 793 aaKnown RBP16.12■□□□□ 0.17
PRKCB-205ENST00000472066 NGEFQ8N5V2 710 aa16.12■□□□□ 0.17
PRKCB-205ENST00000472066 BABAM1Q9NWV8 329 aa16.12■□□□□ 0.17
PRKCB-205ENST00000472066 RGPD3A6NKT7 1758 aaPredicted RBP16.11■□□□□ 0.17
PRKCB-205ENST00000472066 RGPD4Q7Z3J3 1758 aa16.11■□□□□ 0.17
PRKCB-205ENST00000472066 CHL1O00533 1208 aa16.11■□□□□ 0.17
PRKCB-205ENST00000472066 ITPK1Q13572 414 aa16.11■□□□□ 0.17
PRKCB-205ENST00000472066 NBPF14Q5TI25 921 aa16.11■□□□□ 0.17
PRKCB-205ENST00000472066 ZNF496Q96IT1 587 aaPredicted RBP16.11■□□□□ 0.17
PRKCB-205ENST00000472066 LAS1LQ9Y4W2 734 aaKnown RBP16.11■□□□□ 0.17
PRKCB-205ENST00000472066 DLG5Q8TDM6 1919 aa16.11■□□□□ 0.17
PRKCB-205ENST00000472066 KAT6BQ8WYB5 2073 aa16.1■□□□□ 0.17
PRKCB-205ENST00000472066 HMGB2P26583 209 aaKnown RBP16.1■□□□□ 0.17
PRKCB-205ENST00000472066 VSIG10Q8N0Z9 540 aa16.1■□□□□ 0.17
PRKCB-205ENST00000472066 CFAP44Q96MT7 982 aa16.1■□□□□ 0.17
PRKCB-205ENST00000472066 FMNL2Q96PY5 1086 aa16.1■□□□□ 0.17
PRKCB-205ENST00000472066 TSPYL4Q9UJ04 414 aa16.1■□□□□ 0.17
PRKCB-205ENST00000472066 ZNF853P0CG23 659 aa16.09■□□□□ 0.17
PRKCB-205ENST00000472066 LINC00116Q8NCU8 138 aa16.09■□□□□ 0.17
PRKCB-205ENST00000472066 KCPQ6ZWJ8 1503 aa16.09■□□□□ 0.17
PRKCB-205ENST00000472066 LY75O60449 1722 aa16.08■□□□□ 0.17
PRKCB-205ENST00000472066 EIF4A1P60842 406 aaKnown RBP16.08■□□□□ 0.16
PRKCB-205ENST00000472066 GNAI1P63096 354 aa16.08■□□□□ 0.16
PRKCB-205ENST00000472066 WDR63Q8IWG1 891 aa16.08■□□□□ 0.16
PRKCB-205ENST00000472066 AKT1S1Q96B36 256 aa16.08■□□□□ 0.16
PRKCB-205ENST00000472066 ANO8Q9HCE9 1232 aaPredicted RBP16.08■□□□□ 0.16
PRKCB-205ENST00000472066 IFT57Q9NWB7 429 aa16.08■□□□□ 0.16
PRKCB-205ENST00000472066 HEG1Q9ULI3 1381 aa16.08■□□□□ 0.16
PRKCB-205ENST00000472066 RREB1Q92766 1687 aa16.08■□□□□ 0.16
PRKCB-205ENST00000472066 SIPA1L3O60292 1781 aaPredicted RBP16.08■□□□□ 0.16
PRKCB-205ENST00000472066 SLC15A2Q16348 729 aa16.07■□□□□ 0.16
PRKCB-205ENST00000472066 ZNF827Q17R98 1081 aa16.07■□□□□ 0.16
PRKCB-205ENST00000472066 DNAJC10Q8IXB1 793 aa16.07■□□□□ 0.16
PRKCB-205ENST00000472066 STK32BQ9NY57 414 aa16.07■□□□□ 0.16
PRKCB-205ENST00000472066 PAPPAQ13219 1627 aa16.07■□□□□ 0.16
PRKCB-205ENST00000472066 IL16Q14005 1332 aa16.06■□□□□ 0.16
PRKCB-205ENST00000472066 TEX13AQ9BXU3 409 aaPredicted RBP16.06■□□□□ 0.16
PRKCB-205ENST00000472066 MBIPQ9NS73 344 aa16.06■□□□□ 0.16
PRKCB-205ENST00000472066 VIRMAQ69YN4 1812 aaKnown RBP16.05■□□□□ 0.16
PRKCB-205ENST00000472066 ZNF521Q96K83 1311 aa16.05■□□□□ 0.16
PRKCB-205ENST00000472066 SNRPA1P09661 255 aaKnown RBP16.05■□□□□ 0.16
PRKCB-205ENST00000472066 CYP19A1P11511 503 aaPredicted RBP16.05■□□□□ 0.16
PRKCB-205ENST00000472066 R3HDM1Q15032 1099 aaKnown RBP16.05■□□□□ 0.16
PRKCB-205ENST00000472066 RC3H1Q5TC82 1133 aaKnown RBP16.05■□□□□ 0.16
PRKCB-205ENST00000472066 NUP188Q5SRE5 1749 aa16.05■□□□□ 0.16
PRKCB-205ENST00000472066 PRAMEF22A3QJZ6 481 aa16.04■□□□□ 0.16
PRKCB-205ENST00000472066 GIGYF1O75420 1035 aaPredicted RBP16.04■□□□□ 0.16
PRKCB-205ENST00000472066 STARD3NLO95772 234 aa16.04■□□□□ 0.16
PRKCB-205ENST00000472066 AK7Q96M32 723 aa16.04■□□□□ 0.16
PRKCB-205ENST00000472066 TFCP2L1Q9NZI6 479 aa16.04■□□□□ 0.16
PRKCB-205ENST00000472066 CRKLP46109 303 aaKnown RBP16.03■□□□□ 0.16
PRKCB-205ENST00000472066 INTS5Q6P9B9 1019 aaKnown RBP16.03■□□□□ 0.16
PRKCB-205ENST00000472066 USP16Q9Y5T5 823 aa16.03■□□□□ 0.16
PRKCB-205ENST00000472066 ZNF831Q5JPB2 1677 aa16.02■□□□□ 0.16
PRKCB-205ENST00000472066 CNTNAP4Q9C0A0 1308 aa16.02■□□□□ 0.16
PRKCB-205ENST00000472066 PSDA5PKW4 1024 aaPredicted RBP16.02■□□□□ 0.16
PRKCB-205ENST00000472066 TSR2Q969E8 191 aaKnown RBP16.02■□□□□ 0.16
PRKCB-205ENST00000472066 SPINK5Q9NQ38 1064 aaPredicted RBP16.02■□□□□ 0.16
PRKCB-205ENST00000472066 UBR2Q8IWV8 1755 aa16.02■□□□□ 0.15
PRKCB-205ENST00000472066 RPS6KA4O75676 772 aa16.01■□□□□ 0.15
PRKCB-205ENST00000472066 HNRNPUQ00839 825 aaKnown RBP eCLIP16.01■□□□□ 0.15
PRKCB-205ENST00000472066 KRT24Q2M2I5 525 aa16.01■□□□□ 0.15
PRKCB-205ENST00000472066 CCDC87Q9NVE4 849 aa16.01■□□□□ 0.15
PRKCB-205ENST00000472066 KDM3BQ7LBC6 1761 aa16■□□□□ 0.15
PRKCB-205ENST00000472066 GNPATO15228 680 aa16■□□□□ 0.15
PRKCB-205ENST00000472066 A1BGP04217 495 aa16■□□□□ 0.15
PRKCB-205ENST00000472066 GOLGA2Q08379 1002 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms