RNA–Protein interactions for RNA: ENST00000471724.5

SSR4-207, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 3

Gene SSR4, Length 443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-207ENST00000471724 EZH2Q15910 746 aaKnown RBP18.45■□□□□ 0.54
SSR4-207ENST00000471724 RRP7AQ9Y3A4 280 aaKnown RBP18.45■□□□□ 0.54
SSR4-207ENST00000471724 ZNF831Q5JPB2 1677 aa18.44■□□□□ 0.54
SSR4-207ENST00000471724 PLSCR1O15162 318 aa18.44■□□□□ 0.54
SSR4-207ENST00000471724 PRIM1P49642 420 aaKnown RBP18.44■□□□□ 0.54
SSR4-207ENST00000471724 CABP4P57796 275 aa18.44■□□□□ 0.54
SSR4-207ENST00000471724 NEUROD2Q15784 382 aa18.44■□□□□ 0.54
SSR4-207ENST00000471724 SLC52A2Q9HAB3 445 aa18.44■□□□□ 0.54
SSR4-207ENST00000471724 RREB1Q92766 1687 aa18.44■□□□□ 0.54
SSR4-207ENST00000471724 CICQ96RK0 1608 aaPredicted RBP18.43■□□□□ 0.54
SSR4-207ENST00000471724 IL17REQ8NFR9 667 aa18.43■□□□□ 0.54
SSR4-207ENST00000471724 KCNQ2O43526 872 aa18.42■□□□□ 0.54
SSR4-207ENST00000471724 CCDC27Q2M243 656 aa18.42■□□□□ 0.54
SSR4-207ENST00000471724 MCM10Q7L590 875 aa18.42■□□□□ 0.54
SSR4-207ENST00000471724 LGR6Q9HBX8 967 aa18.42■□□□□ 0.54
SSR4-207ENST00000471724 CALD1Q05682 793 aaKnown RBP18.41■□□□□ 0.54
SSR4-207ENST00000471724 PIGBQ92521 554 aa18.4■□□□□ 0.54
SSR4-207ENST00000471724 TRIM35Q9UPQ4 493 aa18.4■□□□□ 0.54
SSR4-207ENST00000471724 DCTN1Q14203 1278 aa18.39■□□□□ 0.53
SSR4-207ENST00000471724 NBPF14Q5TI25 921 aa18.39■□□□□ 0.53
SSR4-207ENST00000471724 NFATC2IPQ8NCF5 419 aa18.39■□□□□ 0.53
SSR4-207ENST00000471724 SMARCC1Q92922 1105 aaPredicted RBP18.39■□□□□ 0.53
SSR4-207ENST00000471724 NUP188Q5SRE5 1749 aa18.39■□□□□ 0.53
SSR4-207ENST00000471724 TAF1LQ8IZX4 1826 aa18.39■□□□□ 0.53
SSR4-207ENST00000471724 C5P01031 1676 aa18.38■□□□□ 0.53
SSR4-207ENST00000471724 PALLDQ8WX93 1383 aa18.38■□□□□ 0.53
SSR4-207ENST00000471724 LAMB4A4D0S4 1761 aa18.37■□□□□ 0.53
SSR4-207ENST00000471724 PTF1AQ7RTS3 328 aa18.37■□□□□ 0.53
SSR4-207ENST00000471724 KCPQ6ZWJ8 1503 aa18.37■□□□□ 0.53
SSR4-207ENST00000471724 COL5A3P25940 1745 aaPredicted RBP18.36■□□□□ 0.53
SSR4-207ENST00000471724 TJP1Q07157 1748 aa18.36■□□□□ 0.53
SSR4-207ENST00000471724 TAF7Q15545 349 aaPredicted RBP18.36■□□□□ 0.53
SSR4-207ENST00000471724 THUMPD2Q9BTF0 503 aaKnown RBP18.36■□□□□ 0.53
SSR4-207ENST00000471724 WWC1Q8IX03 1113 aa18.35■□□□□ 0.53
SSR4-207ENST00000471724 TTC5Q8N0Z6 440 aa18.35■□□□□ 0.53
SSR4-207ENST00000471724 BABAM1Q9NWV8 329 aa18.35■□□□□ 0.53
SSR4-207ENST00000471724 BTBD11A6QL63 1104 aa18.34■□□□□ 0.53
SSR4-207ENST00000471724 IL16Q14005 1332 aa18.33■□□□□ 0.53
SSR4-207ENST00000471724 R3HDM1Q15032 1099 aaKnown RBP18.33■□□□□ 0.52
SSR4-207ENST00000471724 ATG3Q9NT62 314 aa18.33■□□□□ 0.52
SSR4-207ENST00000471724 ASAP1Q9ULH1 1129 aa18.33■□□□□ 0.52
SSR4-207ENST00000471724 PSDA5PKW4 1024 aaPredicted RBP18.32■□□□□ 0.52
SSR4-207ENST00000471724 HMGB2P26583 209 aaKnown RBP18.32■□□□□ 0.52
SSR4-207ENST00000471724 GNAI1P63096 354 aa18.32■□□□□ 0.52
SSR4-207ENST00000471724 HNRNPUQ00839 825 aaKnown RBP eCLIP18.32■□□□□ 0.52
SSR4-207ENST00000471724 TXNRD1Q16881 649 aa18.32■□□□□ 0.52
SSR4-207ENST00000471724 ZNF790Q6PG37 636 aa18.32■□□□□ 0.52
SSR4-207ENST00000471724 WDR63Q8IWG1 891 aa18.32■□□□□ 0.52
SSR4-207ENST00000471724 IFT57Q9NWB7 429 aa18.32■□□□□ 0.52
SSR4-207ENST00000471724 SALL2Q9Y467 1007 aaPredicted RBP18.32■□□□□ 0.52
SSR4-207ENST00000471724 SENP3-EIF4A1A0A087X0R7 540 aa18.31■□□□□ 0.52
SSR4-207ENST00000471724 SLC27A3Q5K4L6 730 aa18.31■□□□□ 0.52
SSR4-207ENST00000471724 CFAP44Q96MT7 982 aa18.31■□□□□ 0.52
SSR4-207ENST00000471724 TSPYL4Q9UJ04 414 aa18.31■□□□□ 0.52
SSR4-207ENST00000471724 ZNF521Q96K83 1311 aa18.3■□□□□ 0.52
SSR4-207ENST00000471724 C4BP0C0L5 1744 aa18.29■□□□□ 0.52
SSR4-207ENST00000471724 LOC102724428A0A0B4J2F2 783 aa18.29■□□□□ 0.52
SSR4-207ENST00000471724 SIK1P57059 783 aa18.29■□□□□ 0.52
SSR4-207ENST00000471724 SLC39A6Q13433 755 aa18.29■□□□□ 0.52
SSR4-207ENST00000471724 QSER1Q2KHR3 1735 aa18.29■□□□□ 0.52
SSR4-207ENST00000471724 CHL1O00533 1208 aa18.28■□□□□ 0.52
SSR4-207ENST00000471724 PROM2Q8N271 834 aa18.28■□□□□ 0.52
SSR4-207ENST00000471724 FMNL2Q96PY5 1086 aa18.28■□□□□ 0.52
SSR4-207ENST00000471724 RBM42Q9BTD8 480 aaKnown RBP18.28■□□□□ 0.52
SSR4-207ENST00000471724 CCNL1Q9UK58 526 aaPredicted RBP18.28■□□□□ 0.52
SSR4-207ENST00000471724 LAS1LQ9Y4W2 734 aaKnown RBP18.28■□□□□ 0.52
SSR4-207ENST00000471724 HEG1Q9ULI3 1381 aa18.28■□□□□ 0.52
SSR4-207ENST00000471724 LRP5O75197 1615 aa18.27■□□□□ 0.52
SSR4-207ENST00000471724 ZBED9Q6R2W3 1325 aa18.27■□□□□ 0.52
SSR4-207ENST00000471724 PTCD1O75127 700 aaKnown RBP18.27■□□□□ 0.52
SSR4-207ENST00000471724 ZNF853P0CG23 659 aa18.27■□□□□ 0.52
SSR4-207ENST00000471724 VSIG10Q8N0Z9 540 aa18.27■□□□□ 0.52
SSR4-207ENST00000471724 TUBGCP6Q96RT7 1819 aa18.26■□□□□ 0.51
SSR4-207ENST00000471724 MYH16Q9H6N6 1097 aa18.26■□□□□ 0.51
SSR4-207ENST00000471724 STK32BQ9NY57 414 aa18.26■□□□□ 0.51
SSR4-207ENST00000471724 GOLGA2Q08379 1002 aa18.25■□□□□ 0.51
SSR4-207ENST00000471724 ZNF496Q96IT1 587 aaPredicted RBP18.25■□□□□ 0.51
SSR4-207ENST00000471724 MBIPQ9NS73 344 aa18.25■□□□□ 0.51
SSR4-207ENST00000471724 UBR3Q6ZT12 1888 aa18.24■□□□□ 0.51
SSR4-207ENST00000471724 ATP6V1AP38606 617 aa18.24■□□□□ 0.51
SSR4-207ENST00000471724 MIS18AQ9NYP9 233 aa18.24■□□□□ 0.51
SSR4-207ENST00000471724 E9PSI1 815 aa18.23■□□□□ 0.51
SSR4-207ENST00000471724 KCNQ3O43525 872 aa18.23■□□□□ 0.51
SSR4-207ENST00000471724 EIF4A1P60842 406 aaKnown RBP18.23■□□□□ 0.51
SSR4-207ENST00000471724 TEX13AQ9BXU3 409 aaPredicted RBP18.23■□□□□ 0.51
SSR4-207ENST00000471724 ANO8Q9HCE9 1232 aaPredicted RBP18.23■□□□□ 0.51
SSR4-207ENST00000471724 FANCIQ9NVI1 1328 aa18.23■□□□□ 0.51
SSR4-207ENST00000471724 MYH14Q7Z406 1995 aaKnown RBP18.22■□□□□ 0.51
SSR4-207ENST00000471724 SNRPA1P09661 255 aaKnown RBP18.22■□□□□ 0.51
SSR4-207ENST00000471724 SLC15A2Q16348 729 aa18.22■□□□□ 0.51
SSR4-207ENST00000471724 SOS1Q07889 1333 aaPredicted RBP18.22■□□□□ 0.51
SSR4-207ENST00000471724 SLC4A9Q96Q91 983 aa18.21■□□□□ 0.51
SSR4-207ENST00000471724 LRRC4BQ9NT99 713 aa18.21■□□□□ 0.51
SSR4-207ENST00000471724 CACNA1FO60840 1977 aa18.21■□□□□ 0.5
SSR4-207ENST00000471724 HOXB7P09629 217 aa18.2■□□□□ 0.5
SSR4-207ENST00000471724 ITPK1Q13572 414 aa18.2■□□□□ 0.5
SSR4-207ENST00000471724 TSR2Q969E8 191 aaKnown RBP18.2■□□□□ 0.5
SSR4-207ENST00000471724 CNTNAP4Q9C0A0 1308 aa18.2■□□□□ 0.5
SSR4-207ENST00000471724 STARD3NLO95772 234 aa18.19■□□□□ 0.5
SSR4-207ENST00000471724 C4AP0C0L4 1744 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms