RNA–Protein interactions for RNA: ENST00000471445.5

SREBF1-210, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 936 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-210ENST00000471445 CICQ96RK0 1608 aaPredicted RBP28.35■■■□□ 2.13
SREBF1-210ENST00000471445 SYT17Q9BSW7 474 aa28.34■■■□□ 2.13
SREBF1-210ENST00000471445 MRC1P22897 1456 aa28.34■■■□□ 2.13
SREBF1-210ENST00000471445 HMOX1P09601 288 aa28.32■■■□□ 2.12
SREBF1-210ENST00000471445 POLD1P28340 1107 aa28.32■■■□□ 2.12
SREBF1-210ENST00000471445 CNGB1Q14028 1251 aaPredicted RBP28.32■■■□□ 2.12
SREBF1-210ENST00000471445 LINC00116Q8NCU8 138 aa28.32■■■□□ 2.12
SREBF1-210ENST00000471445 AK7Q96M32 723 aa28.32■■■□□ 2.12
SREBF1-210ENST00000471445 ITPK1Q13572 414 aa28.31■■■□□ 2.12
SREBF1-210ENST00000471445 FLAD1Q8NFF5 587 aa28.31■■■□□ 2.12
SREBF1-210ENST00000471445 CABP4P57796 275 aa28.3■■■□□ 2.12
SREBF1-210ENST00000471445 AMIGO3Q86WK7 504 aa28.3■■■□□ 2.12
SREBF1-210ENST00000471445 ATP6V1AP38606 617 aa28.29■■■□□ 2.12
SREBF1-210ENST00000471445 AKAP4Q5JQC9 854 aa28.29■■■□□ 2.12
SREBF1-210ENST00000471445 TJP1Q07157 1748 aa28.29■■■□□ 2.12
SREBF1-210ENST00000471445 MSH5O43196 834 aa28.28■■■□□ 2.12
SREBF1-210ENST00000471445 SLC4A9Q96Q91 983 aa28.26■■■□□ 2.11
SREBF1-210ENST00000471445 MYH14Q7Z406 1995 aaKnown RBP28.25■■■□□ 2.11
SREBF1-210ENST00000471445 DCAF8L1A6NGE4 600 aa28.25■■■□□ 2.11
SREBF1-210ENST00000471445 SSFA2P28290 1259 aa28.25■■■□□ 2.11
SREBF1-210ENST00000471445 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP28.23■■■□□ 2.11
SREBF1-210ENST00000471445 MTHFSDQ2M296 383 aaKnown RBP28.23■■■□□ 2.11
SREBF1-210ENST00000471445 MSL1Q68DK7 614 aa28.23■■■□□ 2.11
SREBF1-210ENST00000471445 C4AP0C0L4 1744 aa28.23■■■□□ 2.11
SREBF1-210ENST00000471445 PHF14O94880 888 aa28.22■■■□□ 2.11
SREBF1-210ENST00000471445 NFATC2IPQ8NCF5 419 aa28.22■■■□□ 2.11
SREBF1-210ENST00000471445 RBM42Q9BTD8 480 aaKnown RBP28.22■■■□□ 2.11
SREBF1-210ENST00000471445 U2SURPO15042 1029 aaKnown RBP28.21■■■□□ 2.11
SREBF1-210ENST00000471445 GNPATO15228 680 aa28.21■■■□□ 2.11
SREBF1-210ENST00000471445 SMIM5Q71RC9 77 aa28.21■■■□□ 2.11
SREBF1-210ENST00000471445 UBR2Q8IWV8 1755 aa28.21■■■□□ 2.11
SREBF1-210ENST00000471445 CNTNAP4Q9C0A0 1308 aa28.2■■■□□ 2.11
SREBF1-210ENST00000471445 SIPA1L3O60292 1781 aaPredicted RBP28.2■■■□□ 2.11
SREBF1-210ENST00000471445 PPP2R1AP30153 589 aa28.2■■■□□ 2.1
SREBF1-210ENST00000471445 RNMTO43148 476 aaKnown RBP28.19■■■□□ 2.1
SREBF1-210ENST00000471445 CFAP53Q96M91 514 aa28.19■■■□□ 2.1
SREBF1-210ENST00000471445 SLC52A2Q9HAB3 445 aa28.19■■■□□ 2.1
SREBF1-210ENST00000471445 CHD4Q14839 1912 aa28.19■■■□□ 2.1
SREBF1-210ENST00000471445 KLHL34Q8N239 644 aa28.18■■■□□ 2.1
SREBF1-210ENST00000471445 LGR6Q9HBX8 967 aa28.18■■■□□ 2.1
SREBF1-210ENST00000471445 KCPQ6ZWJ8 1503 aa28.17■■■□□ 2.1
SREBF1-210ENST00000471445 RC3H1Q5TC82 1133 aaKnown RBP28.16■■■□□ 2.1
SREBF1-210ENST00000471445 PTCD1O75127 700 aaKnown RBP28.14■■■□□ 2.1
SREBF1-210ENST00000471445 YY1P25490 414 aa28.13■■■□□ 2.09
SREBF1-210ENST00000471445 NLGN2Q8NFZ4 835 aa28.13■■■□□ 2.09
SREBF1-210ENST00000471445 GAS2L2Q8NHY3 880 aa28.13■■■□□ 2.09
SREBF1-210ENST00000471445 RTCBQ9Y3I0 505 aaKnown RBP28.13■■■□□ 2.09
SREBF1-210ENST00000471445 RSPH6AQ9H0K4 717 aa28.12■■■□□ 2.09
SREBF1-210ENST00000471445 ADRA2BP18089 450 aa28.11■■■□□ 2.09
SREBF1-210ENST00000471445 NUDCQ9Y266 331 aa28.1■■■□□ 2.09
SREBF1-210ENST00000471445 KIF13BQ9NQT8 1826 aa28.09■■■□□ 2.09
SREBF1-210ENST00000471445 RPS6KA4O75676 772 aa28.09■■■□□ 2.09
SREBF1-210ENST00000471445 PRKAR2BP31323 418 aa28.09■■■□□ 2.09
SREBF1-210ENST00000471445 TRAPPC3LQ5T215 181 aa28.08■■■□□ 2.09
SREBF1-210ENST00000471445 GNAT3A8MTJ3 354 aa28.07■■■□□ 2.08
SREBF1-210ENST00000471445 CRKLP46109 303 aaKnown RBP28.07■■■□□ 2.08
SREBF1-210ENST00000471445 CD2APQ9Y5K6 639 aa28.07■■■□□ 2.08
SREBF1-210ENST00000471445 SLC39A6Q13433 755 aa28.06■■■□□ 2.08
SREBF1-210ENST00000471445 CEMIPQ8WUJ3 1361 aa28.05■■■□□ 2.08
SREBF1-210ENST00000471445 ARHGEF1Q92888 912 aaKnown RBP28.05■■■□□ 2.08
SREBF1-210ENST00000471445 PHACTR3Q96KR7 559 aa28.05■■■□□ 2.08
SREBF1-210ENST00000471445 KIAA1551Q9HCM1 1747 aa28.04■■■□□ 2.08
SREBF1-210ENST00000471445 U2AF1L5P0DN76 240 aaPredicted RBP28.04■■■□□ 2.08
SREBF1-210ENST00000471445 U2AF1Q01081 240 aaKnown RBP eCLIP28.04■■■□□ 2.08
SREBF1-210ENST00000471445 IL17REQ8NFR9 667 aa28.04■■■□□ 2.08
SREBF1-210ENST00000471445 GPR162Q16538 588 aa28.03■■■□□ 2.08
SREBF1-210ENST00000471445 DNAJC10Q8IXB1 793 aa28.03■■■□□ 2.08
SREBF1-210ENST00000471445 INTS5Q6P9B9 1019 aaKnown RBP28.01■■■□□ 2.07
SREBF1-210ENST00000471445 UTRNP46939 3433 aa28.01■■■□□ 2.07
SREBF1-210ENST00000471445 DLG5Q8TDM6 1919 aa28■■■□□ 2.07
SREBF1-210ENST00000471445 FCHSD2O94868 740 aa28■■■□□ 2.07
SREBF1-210ENST00000471445 GYS1P13807 737 aa28■■■□□ 2.07
SREBF1-210ENST00000471445 RFC4P35249 363 aa28■■■□□ 2.07
SREBF1-210ENST00000471445 TEFQ10587 303 aa28■■■□□ 2.07
SREBF1-210ENST00000471445 VSIG10Q8N0Z9 540 aa28■■■□□ 2.07
SREBF1-210ENST00000471445 MMP10P09238 476 aa27.99■■■□□ 2.07
SREBF1-210ENST00000471445 NLGN1Q8N2Q7 840 aa27.99■■■□□ 2.07
SREBF1-210ENST00000471445 CCDC87Q9NVE4 849 aa27.99■■■□□ 2.07
SREBF1-210ENST00000471445 CYP19A1P11511 503 aaPredicted RBP27.98■■■□□ 2.07
SREBF1-210ENST00000471445 PELP1Q8IZL8 1130 aaKnown RBP27.98■■■□□ 2.07
SREBF1-210ENST00000471445 SOS1Q07889 1333 aaPredicted RBP27.97■■■□□ 2.07
SREBF1-210ENST00000471445 USP42Q9H9J4 1324 aaKnown RBP27.97■■■□□ 2.07
SREBF1-210ENST00000471445 YBX3P16989 372 aaKnown RBP eCLIP27.97■■■□□ 2.07
SREBF1-210ENST00000471445 TTC5Q8N0Z6 440 aa27.97■■■□□ 2.07
SREBF1-210ENST00000471445 C10orf71Q711Q0 1435 aa27.97■■■□□ 2.07
SREBF1-210ENST00000471445 HEG1Q9ULI3 1381 aa27.95■■■□□ 2.06
SREBF1-210ENST00000471445 N4BP2Q86UW6 1770 aaPredicted RBP27.94■■■□□ 2.06
SREBF1-210ENST00000471445 ZNF790Q6PG37 636 aa27.94■■■□□ 2.06
SREBF1-210ENST00000471445 SRP68Q9UHB9 627 aaKnown RBP27.94■■■□□ 2.06
SREBF1-210ENST00000471445 ZBTB1Q9Y2K1 713 aa27.94■■■□□ 2.06
SREBF1-210ENST00000471445 BRCA1P38398 1863 aaKnown RBP27.93■■■□□ 2.06
SREBF1-210ENST00000471445 ZNF496Q96IT1 587 aaPredicted RBP27.93■■■□□ 2.06
SREBF1-210ENST00000471445 COL15A1P39059 1388 aa27.93■■■□□ 2.06
SREBF1-210ENST00000471445 PXDNLA1KZ92 1463 aa27.93■■■□□ 2.06
SREBF1-210ENST00000471445 SCN7AQ01118 1682 aa27.91■■■□□ 2.06
SREBF1-210ENST00000471445 RALBP1Q15311 655 aa27.91■■■□□ 2.06
SREBF1-210ENST00000471445 GRIN3BO60391 1043 aa27.9■■■□□ 2.06
SREBF1-210ENST00000471445 DDX10Q13206 875 aaKnown RBP27.89■■■□□ 2.06
SREBF1-210ENST00000471445 FKBP8Q14318 412 aa27.89■■■□□ 2.06
SREBF1-210ENST00000471445 RTF1Q92541 710 aaKnown RBP27.89■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms