RNA–Protein interactions for RNA: ENST00000471047.1

CLK2-204, Transcript of CDC like kinase 2, humanhuman

TSL 3

Gene CLK2, Length 701 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-204ENST00000471047 TRIM35Q9UPQ4 493 aa12.92□□□□□ -0.34
CLK2-204ENST00000471047 PAPPAQ13219 1627 aa12.91□□□□□ -0.34
CLK2-204ENST00000471047 SLFN5Q08AF3 891 aa12.91□□□□□ -0.34
CLK2-204ENST00000471047 NEUROD2Q15784 382 aa12.91□□□□□ -0.34
CLK2-204ENST00000471047 WDR63Q8IWG1 891 aa12.91□□□□□ -0.34
CLK2-204ENST00000471047 LRRC4BQ9NT99 713 aa12.91□□□□□ -0.34
CLK2-204ENST00000471047 YBX3P16989 372 aaKnown RBP eCLIP12.9□□□□□ -0.34
CLK2-204ENST00000471047 RIPK4P57078 832 aa12.9□□□□□ -0.34
CLK2-204ENST00000471047 TNS2Q63HR2 1409 aa12.89□□□□□ -0.35
CLK2-204ENST00000471047 E9PSI1 815 aa12.89□□□□□ -0.35
CLK2-204ENST00000471047 DUSP27Q5VZP5 1158 aa12.89□□□□□ -0.35
CLK2-204ENST00000471047 SPINK5Q9NQ38 1064 aaPredicted RBP12.89□□□□□ -0.35
CLK2-204ENST00000471047 IL16Q14005 1332 aa12.88□□□□□ -0.35
CLK2-204ENST00000471047 ATP10DQ9P241 1426 aa12.88□□□□□ -0.35
CLK2-204ENST00000471047 POLD1P28340 1107 aa12.88□□□□□ -0.35
CLK2-204ENST00000471047 USHBP1Q8N6Y0 703 aa12.88□□□□□ -0.35
CLK2-204ENST00000471047 AKT1S1Q96B36 256 aa12.88□□□□□ -0.35
CLK2-204ENST00000471047 PLEKHG2Q9H7P9 1386 aa12.88□□□□□ -0.35
CLK2-204ENST00000471047 PNPLA7Q6ZV29 1317 aa12.88□□□□□ -0.35
CLK2-204ENST00000471047 MTHFSDQ2M296 383 aaKnown RBP12.87□□□□□ -0.35
CLK2-204ENST00000471047 NHSQ6T4R5 1651 aa12.86□□□□□ -0.35
CLK2-204ENST00000471047 KCNQ4P56696 695 aa12.86□□□□□ -0.35
CLK2-204ENST00000471047 LMOD3Q0VAK6 560 aa12.86□□□□□ -0.35
CLK2-204ENST00000471047 HSPA6P17066 643 aa12.85□□□□□ -0.35
CLK2-204ENST00000471047 GAS2L2Q8NHY3 880 aa12.85□□□□□ -0.35
CLK2-204ENST00000471047 SLC16A10Q8TF71 515 aa12.85□□□□□ -0.35
CLK2-204ENST00000471047 HTATSF1O43719 755 aaKnown RBP12.84□□□□□ -0.35
CLK2-204ENST00000471047 NLRP2Q9NX02 1062 aa12.84□□□□□ -0.35
CLK2-204ENST00000471047 PKD1L3Q7Z443 1732 aa12.83□□□□□ -0.36
CLK2-204ENST00000471047 GRIN3BO60391 1043 aa12.83□□□□□ -0.36
CLK2-204ENST00000471047 CALD1Q05682 793 aaKnown RBP12.83□□□□□ -0.36
CLK2-204ENST00000471047 AMOTQ4VCS5 1084 aa12.83□□□□□ -0.36
CLK2-204ENST00000471047 ZNF526Q8TF50 670 aaPredicted RBP12.83□□□□□ -0.36
CLK2-204ENST00000471047 GPBP1L1Q9HC44 474 aaPredicted RBP12.83□□□□□ -0.36
CLK2-204ENST00000471047 RNF123Q5XPI4 1314 aa12.83□□□□□ -0.36
CLK2-204ENST00000471047 MEGF6O75095 1541 aa12.83□□□□□ -0.36
CLK2-204ENST00000471047 ZNF853P0CG23 659 aa12.82□□□□□ -0.36
CLK2-204ENST00000471047 MYH16Q9H6N6 1097 aa12.82□□□□□ -0.36
CLK2-204ENST00000471047 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.82□□□□□ -0.36
CLK2-204ENST00000471047 TFCP2L1Q9NZI6 479 aa12.82□□□□□ -0.36
CLK2-204ENST00000471047 ADAMTS7Q9UKP4 1686 aa12.82□□□□□ -0.36
CLK2-204ENST00000471047 BTAF1O14981 1849 aa12.81□□□□□ -0.36
CLK2-204ENST00000471047 GNAT3A8MTJ3 354 aa12.81□□□□□ -0.36
CLK2-204ENST00000471047 IL2RBP14784 551 aa12.81□□□□□ -0.36
CLK2-204ENST00000471047 PLEKHO1Q53GL0 409 aaPredicted RBP12.81□□□□□ -0.36
CLK2-204ENST00000471047 THUMPD2Q9BTF0 503 aaKnown RBP12.81□□□□□ -0.36
CLK2-204ENST00000471047 SUPT16HQ9Y5B9 1047 aaKnown RBP12.81□□□□□ -0.36
CLK2-204ENST00000471047 DCTN1Q14203 1278 aa12.8□□□□□ -0.36
CLK2-204ENST00000471047 SLC27A3Q5K4L6 730 aa12.8□□□□□ -0.36
CLK2-204ENST00000471047 RAPGEF4Q8WZA2 1011 aa12.8□□□□□ -0.36
CLK2-204ENST00000471047 IFT57Q9NWB7 429 aa12.8□□□□□ -0.36
CLK2-204ENST00000471047 FANCIQ9NVI1 1328 aa12.8□□□□□ -0.36
CLK2-204ENST00000471047 ADCY9O60503 1353 aa12.8□□□□□ -0.36
CLK2-204ENST00000471047 TATP17735 454 aaPredicted RBP12.79□□□□□ -0.36
CLK2-204ENST00000471047 AKAP4Q5JQC9 854 aa12.79□□□□□ -0.36
CLK2-204ENST00000471047 MSL1Q68DK7 614 aa12.79□□□□□ -0.36
CLK2-204ENST00000471047 MCM10Q7L590 875 aa12.79□□□□□ -0.36
CLK2-204ENST00000471047 RTF1Q92541 710 aaKnown RBP12.79□□□□□ -0.36
CLK2-204ENST00000471047 CFAP44Q96MT7 982 aa12.79□□□□□ -0.36
CLK2-204ENST00000471047 RCAN3Q9UKA8 241 aa12.79□□□□□ -0.36
CLK2-204ENST00000471047 CEMIPQ8WUJ3 1361 aa12.79□□□□□ -0.36
CLK2-204ENST00000471047 COL24A1Q17RW2 1714 aa12.79□□□□□ -0.36
CLK2-204ENST00000471047 GNAI1P63096 354 aa12.78□□□□□ -0.36
CLK2-204ENST00000471047 ZNF530Q6P9A1 599 aaPredicted RBP12.78□□□□□ -0.36
CLK2-204ENST00000471047 IL17REQ8NFR9 667 aa12.78□□□□□ -0.36
CLK2-204ENST00000471047 TSR2Q969E8 191 aaKnown RBP12.78□□□□□ -0.36
CLK2-204ENST00000471047 VIRMAQ69YN4 1812 aaKnown RBP12.78□□□□□ -0.36
CLK2-204ENST00000471047 CHL1O00533 1208 aa12.77□□□□□ -0.37
CLK2-204ENST00000471047 COL23A1Q86Y22 540 aaPredicted RBP12.77□□□□□ -0.37
CLK2-204ENST00000471047 DDX54Q8TDD1 881 aaKnown RBP12.77□□□□□ -0.37
CLK2-204ENST00000471047 SPG7Q9UQ90 795 aa12.77□□□□□ -0.37
CLK2-204ENST00000471047 MSH5O43196 834 aa12.76□□□□□ -0.37
CLK2-204ENST00000471047 CT47B1P0C2W7 299 aaPredicted RBP12.76□□□□□ -0.37
CLK2-204ENST00000471047 SYTL4Q96C24 671 aaPredicted RBP12.76□□□□□ -0.37
CLK2-204ENST00000471047 WWC3Q9ULE0 1092 aa12.76□□□□□ -0.37
CLK2-204ENST00000471047 TUBGCP6Q96RT7 1819 aa12.76□□□□□ -0.37
CLK2-204ENST00000471047 SIPA1L3O60292 1781 aaPredicted RBP12.75□□□□□ -0.37
CLK2-204ENST00000471047 PHKG2P15735 406 aa12.75□□□□□ -0.37
CLK2-204ENST00000471047 PRIM1P49642 420 aaKnown RBP12.75□□□□□ -0.37
CLK2-204ENST00000471047 QSER1Q2KHR3 1735 aa12.75□□□□□ -0.37
CLK2-204ENST00000471047 C1orf141Q5JVX7 400 aa12.75□□□□□ -0.37
CLK2-204ENST00000471047 MBIPQ9NS73 344 aa12.75□□□□□ -0.37
CLK2-204ENST00000471047 BABAM1Q9NWV8 329 aa12.75□□□□□ -0.37
CLK2-204ENST00000471047 SCN11AQ9UI33 1791 aa12.75□□□□□ -0.37
CLK2-204ENST00000471047 GTF3C3Q9Y5Q9 886 aa12.75□□□□□ -0.37
CLK2-204ENST00000471047 KAT6BQ8WYB5 2073 aa12.74□□□□□ -0.37
CLK2-204ENST00000471047 KIF3CO14782 793 aa12.74□□□□□ -0.37
CLK2-204ENST00000471047 CYP27B1O15528 508 aa12.74□□□□□ -0.37
CLK2-204ENST00000471047 EXOSC9Q06265 439 aaKnown RBP12.74□□□□□ -0.37
CLK2-204ENST00000471047 LGR6Q9HBX8 967 aa12.74□□□□□ -0.37
CLK2-204ENST00000471047 LAS1LQ9Y4W2 734 aaKnown RBP12.74□□□□□ -0.37
CLK2-204ENST00000471047 RNMTO43148 476 aaKnown RBP12.73□□□□□ -0.37
CLK2-204ENST00000471047 IFNL2Q8IZJ0 200 aa12.73□□□□□ -0.37
CLK2-204ENST00000471047 ZCRB1Q8TBF4 217 aaKnown RBP12.73□□□□□ -0.37
CLK2-204ENST00000471047 CCNL1Q9UK58 526 aaPredicted RBP12.73□□□□□ -0.37
CLK2-204ENST00000471047 KDM3BQ7LBC6 1761 aa12.73□□□□□ -0.37
CLK2-204ENST00000471047 MRC1P22897 1456 aa12.72□□□□□ -0.37
CLK2-204ENST00000471047 KDM6AO15550 1401 aaPredicted RBP12.72□□□□□ -0.37
CLK2-204ENST00000471047 PCDH11XQ9BZA7 1347 aa12.72□□□□□ -0.37
CLK2-204ENST00000471047 PCDH11YQ9BZA8 1340 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms