RNA–Protein interactions for RNA: ENST00000470095.5

HPS1-209, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 5

Gene HPS1, Length 801 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-209ENST00000470095 RCAN3Q9UKA8 241 aa18.45■□□□□ 0.54
HPS1-209ENST00000470095 DOT1LQ8TEK3 1739 aa18.45■□□□□ 0.54
HPS1-209ENST00000470095 PAPPAQ13219 1627 aa18.45■□□□□ 0.54
HPS1-209ENST00000470095 ITGB4P16144 1822 aa18.44■□□□□ 0.54
HPS1-209ENST00000470095 ONECUT3O60422 494 aaPredicted RBP18.44■□□□□ 0.54
HPS1-209ENST00000470095 ZNF772Q68DY9 489 aaPredicted RBP18.43■□□□□ 0.54
HPS1-209ENST00000470095 MARCH10Q8NA82 808 aaPredicted RBP18.43■□□□□ 0.54
HPS1-209ENST00000470095 ERVV-2B6SEH9 535 aa18.42■□□□□ 0.54
HPS1-209ENST00000470095 CT47B1P0C2W7 299 aaPredicted RBP18.42■□□□□ 0.54
HPS1-209ENST00000470095 TSPYL6Q8N831 410 aa18.42■□□□□ 0.54
HPS1-209ENST00000470095 BTBD11A6QL63 1104 aa18.41■□□□□ 0.54
HPS1-209ENST00000470095 KCNQ3O43525 872 aa18.41■□□□□ 0.54
HPS1-209ENST00000470095 KRT24Q2M2I5 525 aa18.41■□□□□ 0.54
HPS1-209ENST00000470095 C8orf58Q8NAV2 365 aa18.41■□□□□ 0.54
HPS1-209ENST00000470095 NFATC2IPQ8NCF5 419 aa18.41■□□□□ 0.54
HPS1-209ENST00000470095 RNF123Q5XPI4 1314 aa18.41■□□□□ 0.54
HPS1-209ENST00000470095 CABP4P57796 275 aa18.4■□□□□ 0.54
HPS1-209ENST00000470095 SUPT16HQ9Y5B9 1047 aaKnown RBP18.4■□□□□ 0.54
HPS1-209ENST00000470095 UBR2Q8IWV8 1755 aa18.4■□□□□ 0.54
HPS1-209ENST00000470095 VAMP4O75379 141 aa18.39■□□□□ 0.53
HPS1-209ENST00000470095 RGS17Q9UGC6 210 aaPredicted RBP18.39■□□□□ 0.53
HPS1-209ENST00000470095 BRWD3Q6RI45 1802 aa18.39■□□□□ 0.53
HPS1-209ENST00000470095 A0A0G2JS52 829 aa18.38■□□□□ 0.53
HPS1-209ENST00000470095 RARSP54136 660 aaKnown RBP18.38■□□□□ 0.53
HPS1-209ENST00000470095 EIF4A1P60842 406 aaKnown RBP18.38■□□□□ 0.53
HPS1-209ENST00000470095 MYT1Q01538 1121 aa18.38■□□□□ 0.53
HPS1-209ENST00000470095 TWISTNBQ3B726 338 aaPredicted RBP18.38■□□□□ 0.53
HPS1-209ENST00000470095 SEPT12Q8IYM1 358 aa18.38■□□□□ 0.53
HPS1-209ENST00000470095 HEG1Q9ULI3 1381 aa18.38■□□□□ 0.53
HPS1-209ENST00000470095 RBM6P78332 1123 aaKnown RBP18.37■□□□□ 0.53
HPS1-209ENST00000470095 ELL2O00472 640 aaPredicted RBP18.36■□□□□ 0.53
HPS1-209ENST00000470095 BCL9O00512 1426 aa18.36■□□□□ 0.53
HPS1-209ENST00000470095 C5P01031 1676 aa18.36■□□□□ 0.53
HPS1-209ENST00000470095 SLC39A6Q13433 755 aa18.36■□□□□ 0.53
HPS1-209ENST00000470095 ZNF790Q6PG37 636 aa18.36■□□□□ 0.53
HPS1-209ENST00000470095 KCPQ6ZWJ8 1503 aa18.36■□□□□ 0.53
HPS1-209ENST00000470095 TMOD3Q9NYL9 352 aa18.35■□□□□ 0.53
HPS1-209ENST00000470095 KAT6BQ8WYB5 2073 aa18.34■□□□□ 0.53
HPS1-209ENST00000470095 SOS1Q07889 1333 aaPredicted RBP18.34■□□□□ 0.53
HPS1-209ENST00000470095 BCAR3O75815 825 aa18.34■□□□□ 0.53
HPS1-209ENST00000470095 PIGBQ92521 554 aa18.34■□□□□ 0.53
HPS1-209ENST00000470095 ZNF428Q96B54 188 aa18.34■□□□□ 0.53
HPS1-209ENST00000470095 NHSQ6T4R5 1651 aa18.34■□□□□ 0.53
HPS1-209ENST00000470095 RRP1P56182 461 aaKnown RBP18.33■□□□□ 0.52
HPS1-209ENST00000470095 SSH1Q8WYL5 1049 aa18.33■□□□□ 0.52
HPS1-209ENST00000470095 BCL2L13Q9BXK5 485 aa18.33■□□□□ 0.52
HPS1-209ENST00000470095 SBF2Q86WG5 1849 aa18.33■□□□□ 0.52
HPS1-209ENST00000470095 PRIM1P49642 420 aaKnown RBP18.32■□□□□ 0.52
HPS1-209ENST00000470095 ALDH1L2Q3SY69 923 aa18.32■□□□□ 0.52
HPS1-209ENST00000470095 POTEAQ6S8J7 498 aa18.32■□□□□ 0.52
HPS1-209ENST00000470095 ZNF496Q96IT1 587 aaPredicted RBP18.32■□□□□ 0.52
HPS1-209ENST00000470095 LAMB4A4D0S4 1761 aa18.32■□□□□ 0.52
HPS1-209ENST00000470095 HOXB7P09629 217 aa18.31■□□□□ 0.52
HPS1-209ENST00000470095 ACSBG1Q96GR2 724 aa18.31■□□□□ 0.52
HPS1-209ENST00000470095 RGS12O14924 1447 aa18.31■□□□□ 0.52
HPS1-209ENST00000470095 GIGYF1O75420 1035 aaPredicted RBP18.3■□□□□ 0.52
HPS1-209ENST00000470095 TTC5Q8N0Z6 440 aa18.3■□□□□ 0.52
HPS1-209ENST00000470095 SMC4Q9NTJ3 1288 aa18.3■□□□□ 0.52
HPS1-209ENST00000470095 RXRBP28702 533 aa18.29■□□□□ 0.52
HPS1-209ENST00000470095 BRPF1P55201 1214 aaPredicted RBP18.29■□□□□ 0.52
HPS1-209ENST00000470095 FAM182BQ5T319 152 aa18.29■□□□□ 0.52
HPS1-209ENST00000470095 MRPL50Q8N5N7 158 aaKnown RBP18.29■□□□□ 0.52
HPS1-209ENST00000470095 ATG3Q9NT62 314 aa18.29■□□□□ 0.52
HPS1-209ENST00000470095 ASAP1Q9ULH1 1129 aa18.29■□□□□ 0.52
HPS1-209ENST00000470095 PRAMEF22A3QJZ6 481 aa18.28■□□□□ 0.52
HPS1-209ENST00000470095 TCERG1O14776 1098 aaKnown RBP18.28■□□□□ 0.52
HPS1-209ENST00000470095 SYTL4Q96C24 671 aaPredicted RBP18.28■□□□□ 0.52
HPS1-209ENST00000470095 FMNL2Q96PY5 1086 aa18.28■□□□□ 0.52
HPS1-209ENST00000470095 BTAF1O14981 1849 aa18.28■□□□□ 0.52
HPS1-209ENST00000470095 CACNA1FO60840 1977 aa18.28■□□□□ 0.52
HPS1-209ENST00000470095 KCNQ2O43526 872 aa18.27■□□□□ 0.52
HPS1-209ENST00000470095 PLIN1O60240 522 aa18.27■□□□□ 0.52
HPS1-209ENST00000470095 KRT27Q7Z3Y8 459 aa18.26■□□□□ 0.51
HPS1-209ENST00000470095 CICQ96RK0 1608 aaPredicted RBP18.26■□□□□ 0.51
HPS1-209ENST00000470095 KIF16BQ96L93 1317 aa18.25■□□□□ 0.51
HPS1-209ENST00000470095 SNRPA1P09661 255 aaKnown RBP18.25■□□□□ 0.51
HPS1-209ENST00000470095 HDGFL1Q5TGJ6 251 aa18.25■□□□□ 0.51
HPS1-209ENST00000470095 CCDC30Q5VVM6 783 aa18.25■□□□□ 0.51
HPS1-209ENST00000470095 TJP1Q07157 1748 aa18.25■□□□□ 0.51
HPS1-209ENST00000470095 PTF1AQ7RTS3 328 aa18.24■□□□□ 0.51
HPS1-209ENST00000470095 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.24■□□□□ 0.51
HPS1-209ENST00000470095 NECTIN2Q92692 538 aa18.24■□□□□ 0.51
HPS1-209ENST00000470095 PTCD1O75127 700 aaKnown RBP18.23■□□□□ 0.51
HPS1-209ENST00000470095 EIF2S2P20042 333 aaKnown RBP18.23■□□□□ 0.51
HPS1-209ENST00000470095 IRX6P78412 446 aaPredicted RBP18.23■□□□□ 0.51
HPS1-209ENST00000470095 NEFLP07196 543 aa18.22■□□□□ 0.51
HPS1-209ENST00000470095 C20orf194Q5TEA3 1177 aa18.22■□□□□ 0.51
HPS1-209ENST00000470095 FRAT1Q92837 279 aaPredicted RBP18.22■□□□□ 0.51
HPS1-209ENST00000470095 SLC4A9Q96Q91 983 aa18.22■□□□□ 0.51
HPS1-209ENST00000470095 NOB1Q9ULX3 412 aaKnown RBP18.22■□□□□ 0.51
HPS1-209ENST00000470095 TNNQ9UQP3 1299 aa18.22■□□□□ 0.51
HPS1-209ENST00000470095 USP16Q9Y5T5 823 aa18.22■□□□□ 0.51
HPS1-209ENST00000470095 ZNF831Q5JPB2 1677 aa18.22■□□□□ 0.51
HPS1-209ENST00000470095 PALLDQ8WX93 1383 aa18.21■□□□□ 0.51
HPS1-209ENST00000470095 ZKSCAN2Q63HK3 967 aa18.21■□□□□ 0.51
HPS1-209ENST00000470095 FAM196AQ6ZSG2 479 aa18.21■□□□□ 0.51
HPS1-209ENST00000470095 STK31Q9BXU1 1019 aa18.21■□□□□ 0.51
HPS1-209ENST00000470095 CHPF2Q9P2E5 772 aa18.21■□□□□ 0.51
HPS1-209ENST00000470095 SLC4A2P04920 1241 aa18.2■□□□□ 0.5
HPS1-209ENST00000470095 TRIM27P14373 513 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms