RNA–Protein interactions for RNA: ENST00000469976.2

LDHA-208, Transcript of lactate dehydrogenase A, humanhuman

TSL 2

Gene LDHA, Length 656 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-208ENST00000469976 NBPF4Q96M43 638 aa14□□□□□ -0.17
LDHA-208ENST00000469976 ORAI2Q96SN7 254 aa14□□□□□ -0.17
LDHA-208ENST00000469976 CHMP4AQ9BY43 222 aa14□□□□□ -0.17
LDHA-208ENST00000469976 HMMRO75330 724 aa13.99□□□□□ -0.17
LDHA-208ENST00000469976 GCP02774 474 aa13.99□□□□□ -0.17
LDHA-208ENST00000469976 HOXB7P09629 217 aa13.99□□□□□ -0.17
LDHA-208ENST00000469976 MFAP1P55081 439 aaKnown RBP13.99□□□□□ -0.17
LDHA-208ENST00000469976 AMOTQ4VCS5 1084 aa13.99□□□□□ -0.17
LDHA-208ENST00000469976 PLEKHO1Q53GL0 409 aaPredicted RBP13.99□□□□□ -0.17
LDHA-208ENST00000469976 G2E3Q7L622 706 aa13.99□□□□□ -0.17
LDHA-208ENST00000469976 C19orf44Q9H6X5 657 aa13.99□□□□□ -0.17
LDHA-208ENST00000469976 RBM25P49756 843 aaKnown RBP13.98□□□□□ -0.17
LDHA-208ENST00000469976 AKAP4Q5JQC9 854 aa13.98□□□□□ -0.17
LDHA-208ENST00000469976 KRT28Q7Z3Y7 464 aa13.98□□□□□ -0.17
LDHA-208ENST00000469976 USHBP1Q8N6Y0 703 aa13.98□□□□□ -0.17
LDHA-208ENST00000469976 MEIS3Q99687 375 aa13.98□□□□□ -0.17
LDHA-208ENST00000469976 PLEKHG2Q9H7P9 1386 aa13.97□□□□□ -0.17
LDHA-208ENST00000469976 DEKP35659 375 aaKnown RBP13.97□□□□□ -0.17
LDHA-208ENST00000469976 FLIIQ13045 1269 aa13.97□□□□□ -0.17
LDHA-208ENST00000469976 NFKBIBQ15653 356 aa13.97□□□□□ -0.17
LDHA-208ENST00000469976 PKD1L3Q7Z443 1732 aa13.96□□□□□ -0.17
LDHA-208ENST00000469976 CDC45O75419 566 aa13.96□□□□□ -0.17
LDHA-208ENST00000469976 GNAI3P08754 354 aa13.96□□□□□ -0.17
LDHA-208ENST00000469976 PLEKHM2Q8IWE5 1019 aa13.96□□□□□ -0.17
LDHA-208ENST00000469976 AK9Q5TCS8 1911 aa13.96□□□□□ -0.18
LDHA-208ENST00000469976 PXDNQ92626 1479 aa13.95□□□□□ -0.18
LDHA-208ENST00000469976 GNAI2P04899 355 aa13.95□□□□□ -0.18
LDHA-208ENST00000469976 ZNF530Q6P9A1 599 aaPredicted RBP13.95□□□□□ -0.18
LDHA-208ENST00000469976 TBC1D2Q9BYX2 928 aa13.95□□□□□ -0.18
LDHA-208ENST00000469976 TTC22Q5TAA0 569 aa13.94□□□□□ -0.18
LDHA-208ENST00000469976 ANKRD24Q8TF21 1146 aa13.94□□□□□ -0.18
LDHA-208ENST00000469976 ZBTB7CA1YPR0 619 aa13.93□□□□□ -0.18
LDHA-208ENST00000469976 F6X3S4 739 aa13.93□□□□□ -0.18
LDHA-208ENST00000469976 EIF4A1P60842 406 aaKnown RBP13.93□□□□□ -0.18
LDHA-208ENST00000469976 C1QBPQ07021 282 aaKnown RBP13.93□□□□□ -0.18
LDHA-208ENST00000469976 FKBP5Q13451 457 aaPredicted RBP13.93□□□□□ -0.18
LDHA-208ENST00000469976 HDGFL1Q5TGJ6 251 aa13.93□□□□□ -0.18
LDHA-208ENST00000469976 SLC4A10Q6U841 1118 aa13.93□□□□□ -0.18
LDHA-208ENST00000469976 LRRC59Q96AG4 307 aaKnown RBP13.93□□□□□ -0.18
LDHA-208ENST00000469976 TMEM94Q12767 1356 aa13.93□□□□□ -0.18
LDHA-208ENST00000469976 PARP4Q9UKK3 1724 aaKnown RBP13.93□□□□□ -0.18
LDHA-208ENST00000469976 RNMTO43148 476 aaKnown RBP13.92□□□□□ -0.18
LDHA-208ENST00000469976 ATF3P18847 181 aa13.92□□□□□ -0.18
LDHA-208ENST00000469976 TEFQ10587 303 aa13.92□□□□□ -0.18
LDHA-208ENST00000469976 TBC1D9Q6ZT07 1266 aa13.92□□□□□ -0.18
LDHA-208ENST00000469976 SNX21Q969T3 373 aa13.92□□□□□ -0.18
LDHA-208ENST00000469976 ANTXR1Q9H6X2 564 aa13.92□□□□□ -0.18
LDHA-208ENST00000469976 C5P01031 1676 aa13.91□□□□□ -0.18
LDHA-208ENST00000469976 TNS3Q68CZ2 1445 aa13.91□□□□□ -0.18
LDHA-208ENST00000469976 GSPT1P15170 499 aaKnown RBP13.91□□□□□ -0.18
LDHA-208ENST00000469976 ATP8B2P98198 1209 aa13.91□□□□□ -0.18
LDHA-208ENST00000469976 XPCQ01831 940 aaPredicted RBP13.91□□□□□ -0.18
LDHA-208ENST00000469976 C1orf141Q5JVX7 400 aa13.91□□□□□ -0.18
LDHA-208ENST00000469976 LGR6Q9HBX8 967 aa13.91□□□□□ -0.18
LDHA-208ENST00000469976 HSCBQ8IWL3 235 aa13.9□□□□□ -0.18
LDHA-208ENST00000469976 OSBPL3Q9H4L5 887 aa13.9□□□□□ -0.18
LDHA-208ENST00000469976 HEG1Q9ULI3 1381 aa13.9□□□□□ -0.18
LDHA-208ENST00000469976 ERBB3P21860 1342 aa13.9□□□□□ -0.19
LDHA-208ENST00000469976 LAMB4A4D0S4 1761 aa13.89□□□□□ -0.19
LDHA-208ENST00000469976 STRCQ7RTU9 1775 aa13.89□□□□□ -0.19
LDHA-208ENST00000469976 BTBD11A6QL63 1104 aa13.89□□□□□ -0.19
LDHA-208ENST00000469976 LMOD2Q6P5Q4 547 aa13.89□□□□□ -0.19
LDHA-208ENST00000469976 ABCA3Q99758 1704 aa13.89□□□□□ -0.19
LDHA-208ENST00000469976 NPHP3Q7Z494 1330 aa13.89□□□□□ -0.19
LDHA-208ENST00000469976 MRC1P22897 1456 aa13.88□□□□□ -0.19
LDHA-208ENST00000469976 CADPS2Q86UW7 1296 aa13.88□□□□□ -0.19
LDHA-208ENST00000469976 IBTKQ9P2D0 1353 aaPredicted RBP13.87□□□□□ -0.19
LDHA-208ENST00000469976 C16orf71Q8IYS4 520 aaPredicted RBP13.87□□□□□ -0.19
LDHA-208ENST00000469976 NECTIN2Q92692 538 aa13.87□□□□□ -0.19
LDHA-208ENST00000469976 AXIN2Q9Y2T1 843 aa13.87□□□□□ -0.19
LDHA-208ENST00000469976 SALL3Q9BXA9 1300 aa13.87□□□□□ -0.19
LDHA-208ENST00000469976 SMARCA5O60264 1052 aaPredicted RBP13.86□□□□□ -0.19
LDHA-208ENST00000469976 UBTFL1P0CB47 393 aaPredicted RBP13.86□□□□□ -0.19
LDHA-208ENST00000469976 CASC1Q6TDU7 716 aa13.86□□□□□ -0.19
LDHA-208ENST00000469976 MPRIPQ6WCQ1 1025 aa13.86□□□□□ -0.19
LDHA-208ENST00000469976 SRCIN1Q9C0H9 1055 aa13.86□□□□□ -0.19
LDHA-208ENST00000469976 USP44Q9H0E7 712 aa13.86□□□□□ -0.19
LDHA-208ENST00000469976 SLKQ9H2G2 1235 aaPredicted RBP13.86□□□□□ -0.19
LDHA-208ENST00000469976 PHAXQ9H814 394 aaKnown RBP13.86□□□□□ -0.19
LDHA-208ENST00000469976 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.86□□□□□ -0.19
LDHA-208ENST00000469976 AOX1Q06278 1338 aa13.86□□□□□ -0.19
LDHA-208ENST00000469976 CPDO75976 1380 aa13.85□□□□□ -0.19
LDHA-208ENST00000469976 FRAT2O75474 233 aaPredicted RBP13.85□□□□□ -0.19
LDHA-208ENST00000469976 OTUD7AQ8TE49 926 aaPredicted RBP13.85□□□□□ -0.19
LDHA-208ENST00000469976 DNAAF4Q8WXU2 420 aa13.85□□□□□ -0.19
LDHA-208ENST00000469976 KIF2CQ99661 725 aa13.85□□□□□ -0.19
LDHA-208ENST00000469976 LRRCC1Q9C099 1032 aa13.85□□□□□ -0.19
LDHA-208ENST00000469976 CHMP5Q9NZZ3 219 aa13.85□□□□□ -0.19
LDHA-208ENST00000469976 LRRFIP2Q9Y608 721 aaKnown RBP13.85□□□□□ -0.19
LDHA-208ENST00000469976 KCNQ3O43525 872 aa13.84□□□□□ -0.19
LDHA-208ENST00000469976 RAB11FIP3O75154 756 aa13.84□□□□□ -0.19
LDHA-208ENST00000469976 NPM3O75607 178 aaKnown RBP13.84□□□□□ -0.19
LDHA-208ENST00000469976 TATP17735 454 aaPredicted RBP13.84□□□□□ -0.19
LDHA-208ENST00000469976 EIF2S2P20042 333 aaKnown RBP13.84□□□□□ -0.19
LDHA-208ENST00000469976 SDSP20132 328 aa13.84□□□□□ -0.19
LDHA-208ENST00000469976 PDE1AP54750 535 aa13.84□□□□□ -0.19
LDHA-208ENST00000469976 POLA2Q14181 598 aa13.84□□□□□ -0.19
LDHA-208ENST00000469976 SSH3Q8TE77 659 aa13.84□□□□□ -0.19
LDHA-208ENST00000469976 CHPF2Q9P2E5 772 aa13.84□□□□□ -0.19
LDHA-208ENST00000469976 DBF4Q9UBU7 674 aaPredicted RBP13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms