RNA–Protein interactions for RNA: ENST00000469080.5

USP11-206, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 1 (best)

Gene USP11, Length 3,467 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-206ENST00000469080 CPS1P31327 1500 aa15.04■□□□□ -0
USP11-206ENST00000469080 LETM1O95202 739 aaPredicted RBP15.04■□□□□ -0
USP11-206ENST00000469080 ALDH1L2Q3SY69 923 aa15.04■□□□□ -0
USP11-206ENST00000469080 RAPGEF4Q8WZA2 1011 aa15.04■□□□□ -0
USP11-206ENST00000469080 CCDC85AQ96PX6 553 aaPredicted RBP15.04■□□□□ -0
USP11-206ENST00000469080 NRXN1Q9ULB1 1477 aa15.03■□□□□ -0
USP11-206ENST00000469080 PRAMEF22A3QJZ6 481 aa15.03■□□□□ -0
USP11-206ENST00000469080 FLIIQ13045 1269 aa15.03■□□□□ -0
USP11-206ENST00000469080 ZSCAN30Q86W11 494 aa15.03■□□□□ -0
USP11-206ENST00000469080 PHF23Q9BUL5 403 aaPredicted RBP15.03■□□□□ -0
USP11-206ENST00000469080 PTCD1O75127 700 aaKnown RBP15.03■□□□□ -0
USP11-206ENST00000469080 MCM4P33991 863 aa15.03■□□□□ -0
USP11-206ENST00000469080 TAF7Q15545 349 aaPredicted RBP15.03■□□□□ -0
USP11-206ENST00000469080 GTPBP4Q9BZE4 634 aaKnown RBP15.03■□□□□ -0
USP11-206ENST00000469080 UBTFL1P0CB47 393 aaPredicted RBP15.02■□□□□ -0
USP11-206ENST00000469080 ANO2Q9NQ90 1003 aa15.02■□□□□ -0
USP11-206ENST00000469080 SAMD1Q6SPF0 538 aaPredicted RBP15.02■□□□□ -0
USP11-206ENST00000469080 IL17REQ8NFR9 667 aa15.02□□□□□ -0.01
USP11-206ENST00000469080 CCDC30Q5VVM6 783 aa15.01□□□□□ -0.01
USP11-206ENST00000469080 SIRT2Q8IXJ6 389 aa15.01□□□□□ -0.01
USP11-206ENST00000469080 CHPF2Q9P2E5 772 aa15.01□□□□□ -0.01
USP11-206ENST00000469080 PI4KAP2A4QPH2 592 aa15.01□□□□□ -0.01
USP11-206ENST00000469080 HMMRO75330 724 aa15.01□□□□□ -0.01
USP11-206ENST00000469080 GCP02774 474 aa15.01□□□□□ -0.01
USP11-206ENST00000469080 PI4KAP1Q8N8J0 262 aa15.01□□□□□ -0.01
USP11-206ENST00000469080 CT47B1P0C2W7 299 aaPredicted RBP15.01□□□□□ -0.01
USP11-206ENST00000469080 TBC1D9Q6ZT07 1266 aa15.01□□□□□ -0.01
USP11-206ENST00000469080 ZNF771Q7L3S4 317 aaPredicted RBP15.01□□□□□ -0.01
USP11-206ENST00000469080 ANKRD24Q8TF21 1146 aa15.01□□□□□ -0.01
USP11-206ENST00000469080 KCNJ4P48050 445 aa15□□□□□ -0.01
USP11-206ENST00000469080 CASC1Q6TDU7 716 aa15□□□□□ -0.01
USP11-206ENST00000469080 CD163L1Q9NR16 1453 aa15□□□□□ -0.01
USP11-206ENST00000469080 PLEKHG3A1L390 1219 aa15□□□□□ -0.01
USP11-206ENST00000469080 ZBTB9Q96C00 473 aa15□□□□□ -0.01
USP11-206ENST00000469080 SRGAP3O43295 1099 aa14.99□□□□□ -0.01
USP11-206ENST00000469080 APPP05067 770 aa14.99□□□□□ -0.01
USP11-206ENST00000469080 IL16Q14005 1332 aa14.99□□□□□ -0.01
USP11-206ENST00000469080 FAM177BA6PVY3 158 aa14.99□□□□□ -0.01
USP11-206ENST00000469080 TMEM131LA2VDJ0 1609 aa14.99□□□□□ -0.01
USP11-206ENST00000469080 GNAI2P04899 355 aa14.98□□□□□ -0.01
USP11-206ENST00000469080 NUCB1Q02818 461 aa14.98□□□□□ -0.01
USP11-206ENST00000469080 RGS22Q8NE09 1264 aa14.98□□□□□ -0.01
USP11-206ENST00000469080 MSH6P52701 1360 aa14.98□□□□□ -0.01
USP11-206ENST00000469080 CHL1O00533 1208 aa14.98□□□□□ -0.01
USP11-206ENST00000469080 DYNC1I1O14576 645 aa14.98□□□□□ -0.01
USP11-206ENST00000469080 EVA1CP58658 441 aa14.98□□□□□ -0.01
USP11-206ENST00000469080 REREQ9P2R6 1566 aa14.98□□□□□ -0.01
USP11-206ENST00000469080 ZC3H13Q5T200 1668 aaKnown RBP14.98□□□□□ -0.01
USP11-206ENST00000469080 CWF19L2Q2TBE0 894 aaKnown RBP14.97□□□□□ -0.01
USP11-206ENST00000469080 RIC3Q7Z5B4 369 aa14.97□□□□□ -0.01
USP11-206ENST00000469080 CNPY4Q8N129 248 aa14.97□□□□□ -0.01
USP11-206ENST00000469080 TBC1D32Q96NH3 1257 aa14.97□□□□□ -0.01
USP11-206ENST00000469080 SETBP1Q9Y6X0 1596 aa14.97□□□□□ -0.01
USP11-206ENST00000469080 FLT4P35916 1363 aa14.97□□□□□ -0.01
USP11-206ENST00000469080 PNMA6EA0A0J9YXQ4 647 aa14.97□□□□□ -0.01
USP11-206ENST00000469080 UPF3BQ9BZI7 483 aaKnown RBP14.97□□□□□ -0.01
USP11-206ENST00000469080 ARHGEF28Q8N1W1 1705 aaKnown RBP14.96□□□□□ -0.01
USP11-206ENST00000469080 PTPRUQ92729 1446 aa14.96□□□□□ -0.01
USP11-206ENST00000469080 ATP5J2-PTCD1G3V325 749 aa14.96□□□□□ -0.01
USP11-206ENST00000469080 HDAC1Q13547 482 aaPredicted RBP14.96□□□□□ -0.01
USP11-206ENST00000469080 PLEKHO1Q53GL0 409 aaPredicted RBP14.96□□□□□ -0.01
USP11-206ENST00000469080 SMC5Q8IY18 1101 aa14.96□□□□□ -0.01
USP11-206ENST00000469080 GCC1Q96CN9 775 aa14.96□□□□□ -0.01
USP11-206ENST00000469080 PA2G4Q9UQ80 394 aaKnown RBP14.96□□□□□ -0.01
USP11-206ENST00000469080 TERF1P54274 439 aa14.96□□□□□ -0.01
USP11-206ENST00000469080 TAF3Q5VWG9 929 aa14.96□□□□□ -0.01
USP11-206ENST00000469080 TOM1L2Q6ZVM7 507 aa14.96□□□□□ -0.01
USP11-206ENST00000469080 LRRC7Q96NW7 1537 aa14.96□□□□□ -0.01
USP11-206ENST00000469080 ZFYVE9O95405 1425 aa14.95□□□□□ -0.02
USP11-206ENST00000469080 SPDYE4A6NLX3 237 aa14.95□□□□□ -0.02
USP11-206ENST00000469080 CHMP4CQ96CF2 233 aa14.95□□□□□ -0.02
USP11-206ENST00000469080 PRDM11Q9NQV5 511 aa14.95□□□□□ -0.02
USP11-206ENST00000469080 AXIN2Q9Y2T1 843 aa14.95□□□□□ -0.02
USP11-206ENST00000469080 SPATA31D1Q6ZQQ2 1576 aa14.95□□□□□ -0.02
USP11-206ENST00000469080 CEP85Q6P2H3 762 aa14.95□□□□□ -0.02
USP11-206ENST00000469080 KLHDC4Q8TBB5 520 aa14.95□□□□□ -0.02
USP11-206ENST00000469080 MYO3AQ8NEV4 1616 aa14.95□□□□□ -0.02
USP11-206ENST00000469080 MAP2P11137 1827 aaKnown RBP14.95□□□□□ -0.02
USP11-206ENST00000469080 TTC5Q8N0Z6 440 aa14.94□□□□□ -0.02
USP11-206ENST00000469080 NFATC2IPQ8NCF5 419 aa14.94□□□□□ -0.02
USP11-206ENST00000469080 SRCIN1Q9C0H9 1055 aa14.94□□□□□ -0.02
USP11-206ENST00000469080 USP6P35125 1406 aa14.94□□□□□ -0.02
USP11-206ENST00000469080 CDC45O75419 566 aa14.94□□□□□ -0.02
USP11-206ENST00000469080 CHAMP1Q96JM3 812 aa14.94□□□□□ -0.02
USP11-206ENST00000469080 USP19O94966 1318 aa14.94□□□□□ -0.02
USP11-206ENST00000469080 ADAMTS13Q76LX8 1427 aa14.93□□□□□ -0.02
USP11-206ENST00000469080 SDSP20132 328 aa14.93□□□□□ -0.02
USP11-206ENST00000469080 FAM135BQ49AJ0 1406 aa14.93□□□□□ -0.02
USP11-206ENST00000469080 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.93□□□□□ -0.02
USP11-206ENST00000469080 NBPF7P0C2Y1 421 aaPredicted RBP14.93□□□□□ -0.02
USP11-206ENST00000469080 NEK4P51957 841 aa14.92□□□□□ -0.02
USP11-206ENST00000469080 PROSER3Q2NL68 480 aa14.92□□□□□ -0.02
USP11-206ENST00000469080 PPP1R42Q7Z4L9 355 aa14.92□□□□□ -0.02
USP11-206ENST00000469080 TSC1Q92574 1164 aa14.92□□□□□ -0.02
USP11-206ENST00000469080 CCDC173Q0VFZ6 552 aa14.92□□□□□ -0.02
USP11-206ENST00000469080 GAS2L3Q86XJ1 694 aa14.92□□□□□ -0.02
USP11-206ENST00000469080 CHRM1P11229 460 aaPredicted RBP14.91□□□□□ -0.02
USP11-206ENST00000469080 PLEKHM2Q8IWE5 1019 aa14.91□□□□□ -0.02
USP11-206ENST00000469080 CD2BP2O95400 341 aaKnown RBP14.91□□□□□ -0.02
USP11-206ENST00000469080 ZNF853P0CG23 659 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms