RNA–Protein interactions for RNA: ENST00000468770.1

SNRPD3-205, Transcript of small nuclear ribonucleoprotein D3 polypeptide, humanhuman

TSL 1 (best)

Gene SNRPD3, Length 544 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD3-205ENST00000468770 U2SURPO15042 1029 aaKnown RBP9.68□□□□□ -0.86
SNRPD3-205ENST00000468770 YY1P25490 414 aa9.68□□□□□ -0.86
SNRPD3-205ENST00000468770 ITPK1Q13572 414 aa9.68□□□□□ -0.86
SNRPD3-205ENST00000468770 AKAP4Q5JQC9 854 aa9.68□□□□□ -0.86
SNRPD3-205ENST00000468770 MSL1Q68DK7 614 aa9.68□□□□□ -0.86
SNRPD3-205ENST00000468770 LINC00116Q8NCU8 138 aa9.68□□□□□ -0.86
SNRPD3-205ENST00000468770 QSER1Q2KHR3 1735 aa9.68□□□□□ -0.86
SNRPD3-205ENST00000468770 C5P01031 1676 aa9.67□□□□□ -0.86
SNRPD3-205ENST00000468770 MAP3K5Q99683 1374 aa9.67□□□□□ -0.86
SNRPD3-205ENST00000468770 GNPATO15228 680 aa9.67□□□□□ -0.86
SNRPD3-205ENST00000468770 SSFA2P28290 1259 aa9.67□□□□□ -0.86
SNRPD3-205ENST00000468770 SMIM5Q71RC9 77 aa9.67□□□□□ -0.86
SNRPD3-205ENST00000468770 KDM6AO15550 1401 aaPredicted RBP9.66□□□□□ -0.86
SNRPD3-205ENST00000468770 PTCD1O75127 700 aaKnown RBP9.66□□□□□ -0.86
SNRPD3-205ENST00000468770 GPR162Q16538 588 aa9.66□□□□□ -0.86
SNRPD3-205ENST00000468770 TRAPPC3LQ5T215 181 aa9.66□□□□□ -0.86
SNRPD3-205ENST00000468770 AMIGO3Q86WK7 504 aa9.66□□□□□ -0.86
SNRPD3-205ENST00000468770 CFAP53Q96M91 514 aa9.66□□□□□ -0.86
SNRPD3-205ENST00000468770 RTCBQ9Y3I0 505 aaKnown RBP9.66□□□□□ -0.86
SNRPD3-205ENST00000468770 TAF1LQ8IZX4 1826 aa9.66□□□□□ -0.86
SNRPD3-205ENST00000468770 TUBGCP6Q96RT7 1819 aa9.66□□□□□ -0.86
SNRPD3-205ENST00000468770 C4BP0C0L5 1744 aa9.65□□□□□ -0.86
SNRPD3-205ENST00000468770 MTHFSDQ2M296 383 aaKnown RBP9.65□□□□□ -0.86
SNRPD3-205ENST00000468770 RC3H1Q5TC82 1133 aaKnown RBP9.65□□□□□ -0.86
SNRPD3-205ENST00000468770 PELP1Q8IZL8 1130 aaKnown RBP9.65□□□□□ -0.86
SNRPD3-205ENST00000468770 SLC4A9Q96Q91 983 aa9.65□□□□□ -0.86
SNRPD3-205ENST00000468770 LGR6Q9HBX8 967 aa9.65□□□□□ -0.86
SNRPD3-205ENST00000468770 RNMTO43148 476 aaKnown RBP9.64□□□□□ -0.87
SNRPD3-205ENST00000468770 SLC52A2Q9HAB3 445 aa9.64□□□□□ -0.87
SNRPD3-205ENST00000468770 NUDCQ9Y266 331 aa9.64□□□□□ -0.87
SNRPD3-205ENST00000468770 PPP2R1AP30153 589 aa9.63□□□□□ -0.87
SNRPD3-205ENST00000468770 NLGN2Q8NFZ4 835 aa9.63□□□□□ -0.87
SNRPD3-205ENST00000468770 CD2APQ9Y5K6 639 aa9.63□□□□□ -0.87
SNRPD3-205ENST00000468770 CNTNAP4Q9C0A0 1308 aa9.62□□□□□ -0.87
SNRPD3-205ENST00000468770 RPS6KA4O75676 772 aa9.62□□□□□ -0.87
SNRPD3-205ENST00000468770 ADRA2BP18089 450 aa9.62□□□□□ -0.87
SNRPD3-205ENST00000468770 RFC4P35249 363 aa9.62□□□□□ -0.87
SNRPD3-205ENST00000468770 SLC39A6Q13433 755 aa9.62□□□□□ -0.87
SNRPD3-205ENST00000468770 NLGN1Q8N2Q7 840 aa9.62□□□□□ -0.87
SNRPD3-205ENST00000468770 GAS2L2Q8NHY3 880 aa9.62□□□□□ -0.87
SNRPD3-205ENST00000468770 ARHGEF1Q92888 912 aaKnown RBP9.62□□□□□ -0.87
SNRPD3-205ENST00000468770 COL24A1Q17RW2 1714 aa9.62□□□□□ -0.87
SNRPD3-205ENST00000468770 UTRNP46939 3433 aa9.61□□□□□ -0.87
SNRPD3-205ENST00000468770 GNAT3A8MTJ3 354 aa9.61□□□□□ -0.87
SNRPD3-205ENST00000468770 U2AF1L5P0DN76 240 aaPredicted RBP9.61□□□□□ -0.87
SNRPD3-205ENST00000468770 CRKLP46109 303 aaKnown RBP9.61□□□□□ -0.87
SNRPD3-205ENST00000468770 U2AF1Q01081 240 aaKnown RBP eCLIP9.61□□□□□ -0.87
SNRPD3-205ENST00000468770 UBR3Q6ZT12 1888 aa9.61□□□□□ -0.87
SNRPD3-205ENST00000468770 COL3A1P02461 1466 aaPredicted RBP9.6□□□□□ -0.87
SNRPD3-205ENST00000468770 GRIN3BO60391 1043 aa9.6□□□□□ -0.87
SNRPD3-205ENST00000468770 MMP10P09238 476 aa9.6□□□□□ -0.87
SNRPD3-205ENST00000468770 PRKAR2BP31323 418 aa9.6□□□□□ -0.87
SNRPD3-205ENST00000468770 TEFQ10587 303 aa9.6□□□□□ -0.87
SNRPD3-205ENST00000468770 DNAJC10Q8IXB1 793 aa9.6□□□□□ -0.87
SNRPD3-205ENST00000468770 TTC5Q8N0Z6 440 aa9.6□□□□□ -0.87
SNRPD3-205ENST00000468770 PHACTR3Q96KR7 559 aa9.6□□□□□ -0.87
SNRPD3-205ENST00000468770 FCHSD2O94868 740 aa9.59□□□□□ -0.87
SNRPD3-205ENST00000468770 IL17REQ8NFR9 667 aa9.59□□□□□ -0.87
SNRPD3-205ENST00000468770 RSPH6AQ9H0K4 717 aa9.59□□□□□ -0.87
SNRPD3-205ENST00000468770 SCN11AQ9UI33 1791 aa9.59□□□□□ -0.87
SNRPD3-205ENST00000468770 ZNF831Q5JPB2 1677 aa9.58□□□□□ -0.88
SNRPD3-205ENST00000468770 CYP19A1P11511 503 aaPredicted RBP9.58□□□□□ -0.88
SNRPD3-205ENST00000468770 GYS1P13807 737 aa9.58□□□□□ -0.88
SNRPD3-205ENST00000468770 YBX3P16989 372 aaKnown RBP eCLIP9.58□□□□□ -0.888e-10■■□□□ 12.1
SNRPD3-205ENST00000468770 INTS5Q6P9B9 1019 aaKnown RBP9.58□□□□□ -0.88
SNRPD3-205ENST00000468770 VSIG10Q8N0Z9 540 aa9.58□□□□□ -0.88
SNRPD3-205ENST00000468770 RTF1Q92541 710 aaKnown RBP9.58□□□□□ -0.88
SNRPD3-205ENST00000468770 CCDC87Q9NVE4 849 aa9.58□□□□□ -0.88
SNRPD3-205ENST00000468770 PARP3Q9Y6F1 533 aa9.58□□□□□ -0.88
SNRPD3-205ENST00000468770 ZPR1O75312 459 aa9.57□□□□□ -0.88
SNRPD3-205ENST00000468770 STARD3NLO95772 234 aa9.57□□□□□ -0.88
SNRPD3-205ENST00000468770 NEFMP07197 916 aa9.57□□□□□ -0.88
SNRPD3-205ENST00000468770 ZNF790Q6PG37 636 aa9.57□□□□□ -0.88
SNRPD3-205ENST00000468770 ZNF784Q8NCA9 323 aaPredicted RBP9.57□□□□□ -0.88
SNRPD3-205ENST00000468770 SRP68Q9UHB9 627 aaKnown RBP9.57□□□□□ -0.88
SNRPD3-205ENST00000468770 MYH14Q7Z406 1995 aaKnown RBP9.56□□□□□ -0.88
SNRPD3-205ENST00000468770 MRC1P22897 1456 aa9.56□□□□□ -0.88
SNRPD3-205ENST00000468770 BTBD11A6QL63 1104 aa9.56□□□□□ -0.88
SNRPD3-205ENST00000468770 ZNF496Q96IT1 587 aaPredicted RBP9.56□□□□□ -0.88
SNRPD3-205ENST00000468770 TEX13AQ9BXU3 409 aaPredicted RBP9.56□□□□□ -0.88
SNRPD3-205ENST00000468770 WWC3Q9ULE0 1092 aa9.56□□□□□ -0.88
SNRPD3-205ENST00000468770 COL5A3P25940 1745 aaPredicted RBP9.56□□□□□ -0.88
SNRPD3-205ENST00000468770 USP42Q9H9J4 1324 aaKnown RBP9.56□□□□□ -0.88
SNRPD3-205ENST00000468770 CANXP27824 592 aaKnown RBP9.55□□□□□ -0.88
SNRPD3-205ENST00000468770 TGFB2P61812 414 aa9.55□□□□□ -0.88
SNRPD3-205ENST00000468770 DDX10Q13206 875 aaKnown RBP9.55□□□□□ -0.88
SNRPD3-205ENST00000468770 FKBP8Q14318 412 aa9.55□□□□□ -0.88
SNRPD3-205ENST00000468770 USPL1Q5W0Q7 1092 aa9.55□□□□□ -0.88
SNRPD3-205ENST00000468770 FMNL2Q96PY5 1086 aa9.55□□□□□ -0.88
SNRPD3-205ENST00000468770 ZBTB1Q9Y2K1 713 aa9.55□□□□□ -0.88
SNRPD3-205ENST00000468770 SOS1Q07889 1333 aaPredicted RBP9.55□□□□□ -0.88
SNRPD3-205ENST00000468770 CHD4Q14839 1912 aa9.54□□□□□ -0.88
SNRPD3-205ENST00000468770 GOLGB1Q14789 3259 aaKnown RBP9.54□□□□□ -0.88
SNRPD3-205ENST00000468770 CEMIPQ8WUJ3 1361 aa9.54□□□□□ -0.88
SNRPD3-205ENST00000468770 A0A0G2JLW4 131 aa9.54□□□□□ -0.88
SNRPD3-205ENST00000468770 HTATSF1O43719 755 aaKnown RBP9.54□□□□□ -0.88
SNRPD3-205ENST00000468770 RALBP1Q15311 655 aa9.54□□□□□ -0.88
SNRPD3-205ENST00000468770 MCM10Q7L590 875 aa9.54□□□□□ -0.88
SNRPD3-205ENST00000468770 NPM2Q86SE8 214 aaKnown RBP9.54□□□□□ -0.88
SNRPD3-205ENST00000468770 PNNQ9H307 717 aaKnown RBP9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms