RNA–Protein interactions for RNA: ENST00000468359.1

CDCA7-207, Transcript of cell division cycle associated 7, humanhuman

TSL 3

Gene CDCA7, Length 906 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA7-207ENST00000468359 THSD7AQ9UPZ6 1657 aa11.71□□□□□ -0.53
CDCA7-207ENST00000468359 PHRF1Q9P1Y6 1649 aaKnown RBP11.71□□□□□ -0.53
CDCA7-207ENST00000468359 ACEP12821 1306 aa11.71□□□□□ -0.53
CDCA7-207ENST00000468359 EN1Q05925 392 aaPredicted RBP11.71□□□□□ -0.53
CDCA7-207ENST00000468359 SF3B2Q13435 895 aaKnown RBP11.71□□□□□ -0.53
CDCA7-207ENST00000468359 DEFB132Q7Z7B7 95 aa11.71□□□□□ -0.53
CDCA7-207ENST00000468359 KIAA1468Q9P260 1216 aa11.71□□□□□ -0.53
CDCA7-207ENST00000468359 KIAA0232Q92628 1395 aa11.7□□□□□ -0.54
CDCA7-207ENST00000468359 TRIM6-TRIM34B2RNG4 842 aa11.7□□□□□ -0.54
CDCA7-207ENST00000468359 MAP3K7O43318 606 aa11.7□□□□□ -0.54
CDCA7-207ENST00000468359 NEUROD1Q13562 356 aa11.7□□□□□ -0.54
CDCA7-207ENST00000468359 IFFO2Q5TF58 517 aa11.7□□□□□ -0.54
CDCA7-207ENST00000468359 PRDM11Q9NQV5 511 aa11.7□□□□□ -0.54
CDCA7-207ENST00000468359 BRD4O60885 1362 aaPredicted RBP11.69□□□□□ -0.54
CDCA7-207ENST00000468359 SPATA31A1Q5TZJ5 1347 aa11.69□□□□□ -0.54
CDCA7-207ENST00000468359 CPDO75976 1380 aa11.68□□□□□ -0.54
CDCA7-207ENST00000468359 USP19O94966 1318 aa11.68□□□□□ -0.54
CDCA7-207ENST00000468359 CENPJQ9HC77 1338 aaPredicted RBP11.68□□□□□ -0.54
CDCA7-207ENST00000468359 DISP2A7MBM2 1401 aa11.68□□□□□ -0.54
CDCA7-207ENST00000468359 NRKQ7Z2Y5 1582 aa11.67□□□□□ -0.54
CDCA7-207ENST00000468359 RGPD1P0DJD0 1748 aa11.67□□□□□ -0.54
CDCA7-207ENST00000468359 BAG6P46379 1132 aa11.67□□□□□ -0.54
CDCA7-207ENST00000468359 NYAP1Q6ZVC0 841 aa11.67□□□□□ -0.54
CDCA7-207ENST00000468359 PPIP5K1Q6PFW1 1433 aa11.67□□□□□ -0.54
CDCA7-207ENST00000468359 LMO7Q8WWI1 1683 aa11.66□□□□□ -0.54
CDCA7-207ENST00000468359 A0A0G2JS52 829 aa11.66□□□□□ -0.54
CDCA7-207ENST00000468359 ZC3H6P61129 1189 aaKnown RBP11.66□□□□□ -0.54
CDCA7-207ENST00000468359 MYT1Q01538 1121 aa11.66□□□□□ -0.54
CDCA7-207ENST00000468359 CHRNA2Q15822 529 aa11.66□□□□□ -0.54
CDCA7-207ENST00000468359 BARGINQ6ZT62 677 aa11.66□□□□□ -0.54
CDCA7-207ENST00000468359 ABTB2Q8N961 1025 aa11.66□□□□□ -0.54
CDCA7-207ENST00000468359 L3MBTL2Q969R5 705 aa11.66□□□□□ -0.54
CDCA7-207ENST00000468359 ZFRQ96KR1 1074 aaKnown RBP11.66□□□□□ -0.54
CDCA7-207ENST00000468359 CAMTA1Q9Y6Y1 1673 aa11.65□□□□□ -0.54
CDCA7-207ENST00000468359 SOWAHBA6NEL2 793 aa11.65□□□□□ -0.54
CDCA7-207ENST00000468359 SRPK2P78362 688 aaKnown RBP11.65□□□□□ -0.54
CDCA7-207ENST00000468359 PACS2Q86VP3 889 aa11.65□□□□□ -0.54
CDCA7-207ENST00000468359 NLRP13Q86W25 1043 aa11.65□□□□□ -0.54
CDCA7-207ENST00000468359 SSH2Q76I76 1423 aa11.65□□□□□ -0.54
CDCA7-207ENST00000468359 QRICH2Q9H0J4 1663 aa11.65□□□□□ -0.55
CDCA7-207ENST00000468359 TNS1Q9HBL0 1735 aaKnown RBP11.64□□□□□ -0.55
CDCA7-207ENST00000468359 GCP02774 474 aa11.64□□□□□ -0.55
CDCA7-207ENST00000468359 NUTM2GQ5VZR2 741 aa11.64□□□□□ -0.55
CDCA7-207ENST00000468359 LRP5O75197 1615 aa11.64□□□□□ -0.55
CDCA7-207ENST00000468359 USP6P35125 1406 aa11.63□□□□□ -0.55
CDCA7-207ENST00000468359 RGS20O76081 388 aa11.63□□□□□ -0.55
CDCA7-207ENST00000468359 FAM182BQ5T319 152 aa11.63□□□□□ -0.55
CDCA7-207ENST00000468359 FAM196AQ6ZSG2 479 aa11.63□□□□□ -0.55
CDCA7-207ENST00000468359 STRN4Q9NRL3 753 aa11.63□□□□□ -0.55
CDCA7-207ENST00000468359 SEPT9Q9UHD8 586 aaPredicted RBP11.63□□□□□ -0.55
CDCA7-207ENST00000468359 TIMELESSQ9UNS1 1208 aa11.63□□□□□ -0.55
CDCA7-207ENST00000468359 THRAP3Q9Y2W1 955 aaKnown RBP11.63□□□□□ -0.55
CDCA7-207ENST00000468359 TSR1Q2NL82 804 aaKnown RBP11.62□□□□□ -0.55
CDCA7-207ENST00000468359 CABP1Q9NZU7 370 aa11.62□□□□□ -0.55
CDCA7-207ENST00000468359 SLIT3O75094 1523 aa11.61□□□□□ -0.55
CDCA7-207ENST00000468359 BCAMP50895 628 aa11.61□□□□□ -0.55
CDCA7-207ENST00000468359 EVA1CP58658 441 aa11.61□□□□□ -0.55
CDCA7-207ENST00000468359 LARP1Q6PKG0 1096 aaKnown RBP11.61□□□□□ -0.55
CDCA7-207ENST00000468359 TCP11L2Q8N4U5 519 aa11.61□□□□□ -0.55
CDCA7-207ENST00000468359 COL5A2P05997 1499 aaPredicted RBP11.61□□□□□ -0.55
CDCA7-207ENST00000468359 EVC2Q86UK5 1308 aa11.6□□□□□ -0.55
CDCA7-207ENST00000468359 AATKQ6ZMQ8 1374 aa11.6□□□□□ -0.55
CDCA7-207ENST00000468359 PARD3Q8TEW0 1356 aa11.6□□□□□ -0.55
CDCA7-207ENST00000468359 GRXCR2A6NFK2 248 aa11.6□□□□□ -0.55
CDCA7-207ENST00000468359 LRCH3Q96II8 777 aa11.6□□□□□ -0.55
CDCA7-207ENST00000468359 CAMKK2Q96RR4 588 aa11.6□□□□□ -0.55
CDCA7-207ENST00000468359 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.59□□□□□ -0.55
CDCA7-207ENST00000468359 USP35Q9P2H5 1018 aa11.59□□□□□ -0.55
CDCA7-207ENST00000468359 PARP4Q9UKK3 1724 aaKnown RBP11.59□□□□□ -0.55
CDCA7-207ENST00000468359 CRB1P82279 1406 aa11.59□□□□□ -0.55
CDCA7-207ENST00000468359 COL18A1P39060 1754 aa11.59□□□□□ -0.55
CDCA7-207ENST00000468359 PIK3C2AO00443 1686 aa11.59□□□□□ -0.55
CDCA7-207ENST00000468359 C11orf95C9JLR9 678 aaPredicted RBP11.58□□□□□ -0.56
CDCA7-207ENST00000468359 TRIM37O94972 964 aa11.58□□□□□ -0.56
CDCA7-207ENST00000468359 PDE3BQ13370 1112 aa11.58□□□□□ -0.56
CDCA7-207ENST00000468359 EZH2Q15910 746 aaKnown RBP11.58□□□□□ -0.56
CDCA7-207ENST00000468359 CPSF1Q10570 1443 aaKnown RBP11.58□□□□□ -0.56
CDCA7-207ENST00000468359 ROCK2O75116 1388 aaKnown RBP11.57□□□□□ -0.56
CDCA7-207ENST00000468359 SBNO2Q9Y2G9 1366 aa11.57□□□□□ -0.56
CDCA7-207ENST00000468359 PRSS12P56730 875 aa11.57□□□□□ -0.56
CDCA7-207ENST00000468359 CDCA7LQ96GN5 454 aa11.57□□□□□ -0.56
CDCA7-207ENST00000468359 TSR3Q9UJK0 312 aaKnown RBP11.57□□□□□ -0.56
CDCA7-207ENST00000468359 TSKSQ9UJT2 592 aa11.57□□□□□ -0.56
CDCA7-207ENST00000468359 AKAP12Q02952 1782 aa11.56□□□□□ -0.56
CDCA7-207ENST00000468359 RREB1Q92766 1687 aa11.56□□□□□ -0.56
CDCA7-207ENST00000468359 ITGBL1O95965 494 aaPredicted RBP11.56□□□□□ -0.56
CDCA7-207ENST00000468359 APBA3O96018 575 aa11.56□□□□□ -0.56
CDCA7-207ENST00000468359 TTC21BQ7Z4L5 1316 aa11.56□□□□□ -0.56
CDCA7-207ENST00000468359 TTC21AQ8NDW8 1320 aa11.56□□□□□ -0.56
CDCA7-207ENST00000468359 PEAK1Q9H792 1746 aa11.55□□□□□ -0.56
CDCA7-207ENST00000468359 NBPF26B4DH59 902 aa11.55□□□□□ -0.56
CDCA7-207ENST00000468359 R3HDM1Q15032 1099 aaKnown RBP11.55□□□□□ -0.56
CDCA7-207ENST00000468359 ARHGEF25Q86VW2 580 aa11.55□□□□□ -0.56
CDCA7-207ENST00000468359 KCNH5Q8NCM2 988 aa11.55□□□□□ -0.56
CDCA7-207ENST00000468359 ZEB1P37275 1124 aaPredicted RBP11.54□□□□□ -0.56
CDCA7-207ENST00000468359 WBP1LQ9NX94 342 aa11.54□□□□□ -0.56
CDCA7-207ENST00000468359 RBM27Q9P2N5 1060 aaKnown RBP11.54□□□□□ -0.56
CDCA7-207ENST00000468359 WDR17Q8IZU2 1322 aa11.54□□□□□ -0.56
CDCA7-207ENST00000468359 BCL9O00512 1426 aa11.53□□□□□ -0.56
CDCA7-207ENST00000468359 NUP188Q5SRE5 1749 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms