RNA–Protein interactions for RNA: ENST00000468166.5

SND1-206, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-206ENST00000468166 PDE3AQ14432 1141 aa10.24□□□□□ -0.77
SND1-206ENST00000468166 C20orf194Q5TEA3 1177 aa10.24□□□□□ -0.77
SND1-206ENST00000468166 ZKSCAN2Q63HK3 967 aa10.24□□□□□ -0.77
SND1-206ENST00000468166 EXOC6Q8TAG9 804 aa10.24□□□□□ -0.77
SND1-206ENST00000468166 ZCRB1Q8TBF4 217 aaKnown RBP10.24□□□□□ -0.77
SND1-206ENST00000468166 CACNA1FO60840 1977 aa10.24□□□□□ -0.77
SND1-206ENST00000468166 SPATA31A6Q5VVP1 1343 aa10.24□□□□□ -0.77
SND1-206ENST00000468166 DISP2A7MBM2 1401 aa10.24□□□□□ -0.77
SND1-206ENST00000468166 LRP6O75581 1613 aa10.23□□□□□ -0.77
SND1-206ENST00000468166 BTBD11A6QL63 1104 aa10.23□□□□□ -0.77
SND1-206ENST00000468166 TOGARAM1Q9Y4F4 1720 aa10.22□□□□□ -0.77
SND1-206ENST00000468166 IPO8O15397 1037 aaKnown RBP10.22□□□□□ -0.77
SND1-206ENST00000468166 CYP27B1O15528 508 aa10.22□□□□□ -0.77
SND1-206ENST00000468166 MS4A1P11836 297 aa10.22□□□□□ -0.77
SND1-206ENST00000468166 HSPA1LP34931 641 aa10.22□□□□□ -0.77
SND1-206ENST00000468166 KRT24Q2M2I5 525 aa10.22□□□□□ -0.77
SND1-206ENST00000468166 FTSJ3Q8IY81 847 aaKnown RBP10.22□□□□□ -0.77
SND1-206ENST00000468166 DCAF5Q96JK2 942 aa10.22□□□□□ -0.77
SND1-206ENST00000468166 SOS1Q07889 1333 aaPredicted RBP10.22□□□□□ -0.77
SND1-206ENST00000468166 PAPPAQ13219 1627 aa10.22□□□□□ -0.77
SND1-206ENST00000468166 BRPF1P55201 1214 aaPredicted RBP10.21□□□□□ -0.77
SND1-206ENST00000468166 MRPL50Q8N5N7 158 aaKnown RBP10.21□□□□□ -0.77
SND1-206ENST00000468166 PANK1Q8TE04 598 aa10.21□□□□□ -0.77
SND1-206ENST00000468166 CCDC136Q96JN2 1154 aa10.21□□□□□ -0.77
SND1-206ENST00000468166 C8orf37Q96NL8 207 aa10.21□□□□□ -0.77
SND1-206ENST00000468166 SLC52A2Q9HAB3 445 aa10.21□□□□□ -0.77
SND1-206ENST00000468166 NOB1Q9ULX3 412 aaKnown RBP10.21□□□□□ -0.77
SND1-206ENST00000468166 TNS2Q63HR2 1409 aa10.21□□□□□ -0.78
SND1-206ENST00000468166 C5P01031 1676 aa10.21□□□□□ -0.78
SND1-206ENST00000468166 LAMB4A4D0S4 1761 aa10.2□□□□□ -0.78
SND1-206ENST00000468166 TCERG1O14776 1098 aaKnown RBP10.2□□□□□ -0.78
SND1-206ENST00000468166 ITGB4P16144 1822 aa10.2□□□□□ -0.78
SND1-206ENST00000468166 SPATA31A1Q5TZJ5 1347 aa10.2□□□□□ -0.78
SND1-206ENST00000468166 B4GALNT3Q6L9W6 998 aa10.2□□□□□ -0.78
SND1-206ENST00000468166 ATF7IPQ6VMQ6 1270 aa10.2□□□□□ -0.78
SND1-206ENST00000468166 UBR2Q8IWV8 1755 aa10.2□□□□□ -0.78
SND1-206ENST00000468166 DZIP1LQ8IYY4 767 aaKnown RBP10.2□□□□□ -0.78
SND1-206ENST00000468166 NGLY1Q96IV0 654 aa10.2□□□□□ -0.78
SND1-206ENST00000468166 CDCA7Q9BWT1 371 aaPredicted RBP10.2□□□□□ -0.78
SND1-206ENST00000468166 THRAP3Q9Y2W1 955 aaKnown RBP10.2□□□□□ -0.78
SND1-206ENST00000468166 DOT1LQ8TEK3 1739 aa10.19□□□□□ -0.78
SND1-206ENST00000468166 SPATA31A5Q5VU36 1347 aa10.19□□□□□ -0.78
SND1-206ENST00000468166 SPATA31A7Q8IWB4 1347 aa10.19□□□□□ -0.78
SND1-206ENST00000468166 HOXB7P09629 217 aa10.19□□□□□ -0.78
SND1-206ENST00000468166 TRIM27P14373 513 aa10.19□□□□□ -0.78
SND1-206ENST00000468166 CABP4P57796 275 aa10.19□□□□□ -0.78
SND1-206ENST00000468166 EIF4A1P60842 406 aaKnown RBP10.19□□□□□ -0.78
SND1-206ENST00000468166 DDX54Q8TDD1 881 aaKnown RBP10.19□□□□□ -0.78
SND1-206ENST00000468166 CLUAP1Q96AJ1 413 aa10.19□□□□□ -0.78
SND1-206ENST00000468166 STK31Q9BXU1 1019 aa10.19□□□□□ -0.78
SND1-206ENST00000468166 COG6Q9Y2V7 657 aa10.19□□□□□ -0.78
SND1-206ENST00000468166 CCDC9Q9Y3X0 531 aaKnown RBP10.19□□□□□ -0.78
SND1-206ENST00000468166 N4BP2Q86UW6 1770 aaPredicted RBP10.19□□□□□ -0.78
SND1-206ENST00000468166 BCL9LQ86UU0 1499 aa10.18□□□□□ -0.78
SND1-206ENST00000468166 RLBP1P12271 317 aa10.18□□□□□ -0.78
SND1-206ENST00000468166 NKX1-1Q15270 411 aaPredicted RBP10.18□□□□□ -0.78
SND1-206ENST00000468166 MEX3CQ5U5Q3 659 aaKnown RBP10.18□□□□□ -0.78
SND1-206ENST00000468166 CCDC30Q5VVM6 783 aa10.18□□□□□ -0.78
SND1-206ENST00000468166 UNC5CLQ8IV45 518 aa10.18□□□□□ -0.78
SND1-206ENST00000468166 NFATC2IPQ8NCF5 419 aa10.18□□□□□ -0.78
SND1-206ENST00000468166 ARHGAP45Q92619 1136 aa10.18□□□□□ -0.78
SND1-206ENST00000468166 CHMP4AQ9BY43 222 aa10.18□□□□□ -0.78
SND1-206ENST00000468166 TNNQ9UQP3 1299 aa10.18□□□□□ -0.78
SND1-206ENST00000468166 ERVV-2B6SEH9 535 aa10.17□□□□□ -0.78
SND1-206ENST00000468166 KCNQ3O43525 872 aa10.17□□□□□ -0.78
SND1-206ENST00000468166 MVPQ14764 893 aaKnown RBP10.17□□□□□ -0.78
SND1-206ENST00000468166 HDGFL1Q5TGJ6 251 aa10.17□□□□□ -0.78
SND1-206ENST00000468166 PELP1Q8IZL8 1130 aaKnown RBP10.17□□□□□ -0.78
SND1-206ENST00000468166 TTC5Q8N0Z6 440 aa10.17□□□□□ -0.78
SND1-206ENST00000468166 API5Q9BZZ5 524 aaKnown RBP10.17□□□□□ -0.78
SND1-206ENST00000468166 PTPRCP08575 1304 aa10.16□□□□□ -0.78
SND1-206ENST00000468166 EXOC5O00471 708 aa10.16□□□□□ -0.78
SND1-206ENST00000468166 SLC4A2P04920 1241 aa10.16□□□□□ -0.78
SND1-206ENST00000468166 AAMPQ13685 434 aa10.16□□□□□ -0.78
SND1-206ENST00000468166 VPS72Q15906 364 aa10.16□□□□□ -0.78
SND1-206ENST00000468166 ZNF790Q6PG37 636 aa10.16□□□□□ -0.78
SND1-206ENST00000468166 BARGINQ6ZT62 677 aa10.16□□□□□ -0.78
SND1-206ENST00000468166 ITPRIPQ8IWB1 547 aa10.16□□□□□ -0.78
SND1-206ENST00000468166 FNBP4Q8N3X1 1017 aaPredicted RBP10.16□□□□□ -0.78
SND1-206ENST00000468166 USP21Q9UK80 565 aa10.16□□□□□ -0.78
SND1-206ENST00000468166 GLI3P10071 1580 aa10.16□□□□□ -0.78
SND1-206ENST00000468166 HEG1Q9ULI3 1381 aa10.15□□□□□ -0.78
SND1-206ENST00000468166 ABCC4O15439 1325 aa10.15□□□□□ -0.78
SND1-206ENST00000468166 SLC39A6Q13433 755 aa10.15□□□□□ -0.78
SND1-206ENST00000468166 DDB1Q16531 1140 aa10.15□□□□□ -0.78
SND1-206ENST00000468166 TMEM57Q8N5G2 664 aa10.15□□□□□ -0.78
SND1-206ENST00000468166 NECTIN2Q92692 538 aa10.15□□□□□ -0.78
SND1-206ENST00000468166 DDX19BQ9UMR2 479 aa10.15□□□□□ -0.78
SND1-206ENST00000468166 THSD7AQ9UPZ6 1657 aa10.15□□□□□ -0.79
SND1-206ENST00000468166 RGS12O14924 1447 aa10.15□□□□□ -0.79
SND1-206ENST00000468166 KAT6BQ8WYB5 2073 aa10.14□□□□□ -0.79
SND1-206ENST00000468166 KCPQ6ZWJ8 1503 aa10.14□□□□□ -0.79
SND1-206ENST00000468166 GIGYF1O75420 1035 aaPredicted RBP10.14□□□□□ -0.79
SND1-206ENST00000468166 EIF2S2P20042 333 aaKnown RBP10.14□□□□□ -0.79
SND1-206ENST00000468166 FMNL2Q96PY5 1086 aa10.14□□□□□ -0.79
SND1-206ENST00000468166 TMOD3Q9NYL9 352 aa10.14□□□□□ -0.79
SND1-206ENST00000468166 PXDNLA1KZ92 1463 aa10.13□□□□□ -0.79
SND1-206ENST00000468166 AFF2P51816 1311 aa10.12□□□□□ -0.79
SND1-206ENST00000468166 FLIIQ13045 1269 aa10.12□□□□□ -0.79
SND1-206ENST00000468166 FAM98CQ17RN3 349 aaKnown RBP10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms