RNA–Protein interactions for RNA: ENST00000467533.5

HDAC3-203, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-203ENST00000467533 NBPF4Q96M43 638 aa14.61□□□□□ -0.07
HDAC3-203ENST00000467533 LOC102724428A0A0B4J2F2 783 aa14.6□□□□□ -0.07
HDAC3-203ENST00000467533 SIK1P57059 783 aa14.6□□□□□ -0.07
HDAC3-203ENST00000467533 COG3Q96JB2 828 aa14.6□□□□□ -0.07
HDAC3-203ENST00000467533 TERF2IPQ9NYB0 399 aa14.6□□□□□ -0.07
HDAC3-203ENST00000467533 TIAM2Q8IVF5 1701 aa14.6□□□□□ -0.07
HDAC3-203ENST00000467533 SLC12A5Q9H2X9 1139 aa14.59□□□□□ -0.07
HDAC3-203ENST00000467533 FBLN1P23142 703 aa14.58□□□□□ -0.08
HDAC3-203ENST00000467533 TMF1P82094 1093 aa14.58□□□□□ -0.08
HDAC3-203ENST00000467533 PIGBQ92521 554 aa14.58□□□□□ -0.08
HDAC3-203ENST00000467533 PCDH10Q9P2E7 1040 aa14.58□□□□□ -0.08
HDAC3-203ENST00000467533 CYP27B1O15528 508 aa14.57□□□□□ -0.08
HDAC3-203ENST00000467533 ITPK1Q13572 414 aa14.57□□□□□ -0.08
HDAC3-203ENST00000467533 NLGN1Q8N2Q7 840 aa14.57□□□□□ -0.08
HDAC3-203ENST00000467533 DCAF5Q96JK2 942 aa14.57□□□□□ -0.08
HDAC3-203ENST00000467533 PIM2Q9P1W9 311 aa14.57□□□□□ -0.08
HDAC3-203ENST00000467533 PARP3Q9Y6F1 533 aa14.57□□□□□ -0.08
HDAC3-203ENST00000467533 ATP6V1AP38606 617 aa14.56□□□□□ -0.08
HDAC3-203ENST00000467533 DALRD3Q5D0E6 543 aaKnown RBP14.56□□□□□ -0.08
HDAC3-203ENST00000467533 COL5A3P25940 1745 aaPredicted RBP14.55□□□□□ -0.08
HDAC3-203ENST00000467533 KCNA3P22001 575 aa14.55□□□□□ -0.08
HDAC3-203ENST00000467533 FAM161AQ3B820 660 aa14.55□□□□□ -0.08
HDAC3-203ENST00000467533 TRAPPC3LQ5T215 181 aa14.55□□□□□ -0.08
HDAC3-203ENST00000467533 RTCBQ9Y3I0 505 aaKnown RBP14.55□□□□□ -0.08
HDAC3-203ENST00000467533 RRS1Q15050 365 aaKnown RBP14.54□□□□□ -0.08
HDAC3-203ENST00000467533 L3MBTL2Q969R5 705 aa14.54□□□□□ -0.08
HDAC3-203ENST00000467533 TMOD3Q9NYL9 352 aa14.54□□□□□ -0.08
HDAC3-203ENST00000467533 ZC3H4Q9UPT8 1303 aaKnown RBP14.54□□□□□ -0.08
HDAC3-203ENST00000467533 FOXN1O15353 648 aa14.53□□□□□ -0.08
HDAC3-203ENST00000467533 VEGFAP15692 232 aaPredicted RBP14.53□□□□□ -0.08
HDAC3-203ENST00000467533 RASSF7Q02833 373 aa14.53□□□□□ -0.08
HDAC3-203ENST00000467533 MKRN1Q9UHC7 482 aaKnown RBP14.53□□□□□ -0.08
HDAC3-203ENST00000467533 ZNF831Q5JPB2 1677 aa14.52□□□□□ -0.08
HDAC3-203ENST00000467533 GYS1P13807 737 aa14.52□□□□□ -0.09
HDAC3-203ENST00000467533 PRDM10Q9NQV6 1147 aa14.52□□□□□ -0.09
HDAC3-203ENST00000467533 ASAP1Q9ULH1 1129 aa14.52□□□□□ -0.09
HDAC3-203ENST00000467533 CCDC88AQ3V6T2 1871 aa14.52□□□□□ -0.09
HDAC3-203ENST00000467533 RFC4P35249 363 aa14.51□□□□□ -0.09
HDAC3-203ENST00000467533 KDM6AO15550 1401 aaPredicted RBP14.5□□□□□ -0.09
HDAC3-203ENST00000467533 INSRP06213 1382 aa14.5□□□□□ -0.09
HDAC3-203ENST00000467533 KDRP35968 1356 aa14.5□□□□□ -0.09
HDAC3-203ENST00000467533 GLTPD2A6NH11 291 aa14.5□□□□□ -0.09
HDAC3-203ENST00000467533 ADRA2BP18089 450 aa14.5□□□□□ -0.09
HDAC3-203ENST00000467533 CHRNA5P30532 468 aa14.5□□□□□ -0.09
HDAC3-203ENST00000467533 ARHGEF1Q92888 912 aaKnown RBP14.5□□□□□ -0.09
HDAC3-203ENST00000467533 AIDAQ96BJ3 306 aa14.5□□□□□ -0.09
HDAC3-203ENST00000467533 KIF20BQ96Q89 1820 aa14.5□□□□□ -0.09
HDAC3-203ENST00000467533 NKX1-1Q15270 411 aaPredicted RBP14.49□□□□□ -0.09
HDAC3-203ENST00000467533 CREBZFQ9NS37 354 aa14.49□□□□□ -0.09
HDAC3-203ENST00000467533 FLT4P35916 1363 aa14.48□□□□□ -0.09
HDAC3-203ENST00000467533 DLEC1Q9Y238 1755 aa14.48□□□□□ -0.09
HDAC3-203ENST00000467533 LMNB1P20700 586 aa14.48□□□□□ -0.09
HDAC3-203ENST00000467533 CTCFP49711 727 aaPredicted RBP14.48□□□□□ -0.09
HDAC3-203ENST00000467533 HSP90AB2PQ58FF8 381 aa14.48□□□□□ -0.09
HDAC3-203ENST00000467533 SPG7Q9UQ90 795 aa14.48□□□□□ -0.09
HDAC3-203ENST00000467533 ATG3Q9NT62 314 aa14.47□□□□□ -0.09
HDAC3-203ENST00000467533 CNTNAP4Q9C0A0 1308 aa14.46□□□□□ -0.09
HDAC3-203ENST00000467533 ABHD8Q96I13 439 aa14.46□□□□□ -0.09
HDAC3-203ENST00000467533 RBM42Q9BTD8 480 aaKnown RBP14.46□□□□□ -0.09
HDAC3-203ENST00000467533 CNTNAP1P78357 1384 aa14.46□□□□□ -0.1
HDAC3-203ENST00000467533 VIRMAQ69YN4 1812 aaKnown RBP14.45□□□□□ -0.1
HDAC3-203ENST00000467533 MYH14Q7Z406 1995 aaKnown RBP14.45□□□□□ -0.1
HDAC3-203ENST00000467533 DDR1Q08345 913 aa14.45□□□□□ -0.1
HDAC3-203ENST00000467533 RC3H1Q5TC82 1133 aaKnown RBP14.45□□□□□ -0.1
HDAC3-203ENST00000467533 GGNBP2Q9H3C7 697 aa14.45□□□□□ -0.1
HDAC3-203ENST00000467533 NCAPD2Q15021 1401 aa14.44□□□□□ -0.1
HDAC3-203ENST00000467533 RPS6KA4O75676 772 aa14.44□□□□□ -0.1
HDAC3-203ENST00000467533 MLLT1Q03111 559 aaPredicted RBP14.44□□□□□ -0.1
HDAC3-203ENST00000467533 CARD11Q9BXL7 1154 aa14.44□□□□□ -0.1
HDAC3-203ENST00000467533 LBX1P52954 281 aa14.43□□□□□ -0.1
HDAC3-203ENST00000467533 CHADLQ6NUI6 762 aa14.43□□□□□ -0.1
HDAC3-203ENST00000467533 PUS7Q96PZ0 661 aaKnown RBP14.43□□□□□ -0.1
HDAC3-203ENST00000467533 SLC4A9Q96Q91 983 aa14.43□□□□□ -0.1
HDAC3-203ENST00000467533 SRP68Q9UHB9 627 aaKnown RBP14.43□□□□□ -0.1
HDAC3-203ENST00000467533 KIF24Q5T7B8 1368 aa14.43□□□□□ -0.1
HDAC3-203ENST00000467533 AFDNP55196 1824 aaKnown RBP14.43□□□□□ -0.1
HDAC3-203ENST00000467533 ANKRD26Q9UPS8 1709 aa14.42□□□□□ -0.1
HDAC3-203ENST00000467533 POTECB2RU33 542 aa14.42□□□□□ -0.1
HDAC3-203ENST00000467533 PHKG2P15735 406 aa14.42□□□□□ -0.1
HDAC3-203ENST00000467533 FKBP8Q14318 412 aa14.42□□□□□ -0.1
HDAC3-203ENST00000467533 IFNL2Q8IZJ0 200 aa14.42□□□□□ -0.1
HDAC3-203ENST00000467533 DICER1Q9UPY3 1922 aaKnown RBP14.42□□□□□ -0.1
HDAC3-203ENST00000467533 USP42Q9H9J4 1324 aaKnown RBP14.41□□□□□ -0.1
HDAC3-203ENST00000467533 DPY19L2Q6NUT2 758 aa14.41□□□□□ -0.1
HDAC3-203ENST00000467533 TJP1Q07157 1748 aa14.41□□□□□ -0.1
HDAC3-203ENST00000467533 NRXN2Q9P2S2 1712 aa14.39□□□□□ -0.11
HDAC3-203ENST00000467533 CCDC85CA6NKD9 419 aa14.39□□□□□ -0.11
HDAC3-203ENST00000467533 POLRMTO00411 1230 aaKnown RBP14.39□□□□□ -0.11
HDAC3-203ENST00000467533 FYB1O15117 783 aa14.39□□□□□ -0.11
HDAC3-203ENST00000467533 VEGFBP49765 207 aa14.39□□□□□ -0.11
HDAC3-203ENST00000467533 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.39□□□□□ -0.11
HDAC3-203ENST00000467533 ADAMTS7Q9UKP4 1686 aa14.39□□□□□ -0.11
HDAC3-203ENST00000467533 TONSLQ96HA7 1378 aa14.38□□□□□ -0.11
HDAC3-203ENST00000467533 NFKBIEO00221 500 aa14.38□□□□□ -0.11
HDAC3-203ENST00000467533 POTEIP0CG38 1075 aa14.38□□□□□ -0.11
HDAC3-203ENST00000467533 POTEJP0CG39 1038 aa14.38□□□□□ -0.11
HDAC3-203ENST00000467533 HSPA8P11142 646 aaKnown RBP14.38□□□□□ -0.11
HDAC3-203ENST00000467533 NEUROD1Q13562 356 aa14.38□□□□□ -0.11
HDAC3-203ENST00000467533 SIN3AQ96ST3 1273 aa14.38□□□□□ -0.11
HDAC3-203ENST00000467533 WBP1LQ9NX94 342 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms