RNA–Protein interactions for RNA: ENST00000466538.1

CDC42BPA-211, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 3

Gene CDC42BPA, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-211ENST00000466538 SMTNP53814 917 aa7.62□□□□□ -1.19
CDC42BPA-211ENST00000466538 Q6ZVU0 165 aa7.62□□□□□ -1.19
CDC42BPA-211ENST00000466538 KLF16Q9BXK1 252 aaPredicted RBP7.62□□□□□ -1.19
CDC42BPA-211ENST00000466538 A6NJY4 79 aa7.61□□□□□ -1.19
CDC42BPA-211ENST00000466538 EPHA4P54764 986 aa7.61□□□□□ -1.19
CDC42BPA-211ENST00000466538 PRR20EP86478 221 aa7.61□□□□□ -1.19
CDC42BPA-211ENST00000466538 PRR20CP86479 221 aa7.61□□□□□ -1.19
CDC42BPA-211ENST00000466538 PRR20DP86480 221 aa7.61□□□□□ -1.19
CDC42BPA-211ENST00000466538 PRR20BP86481 221 aa7.61□□□□□ -1.19
CDC42BPA-211ENST00000466538 PRR20AP86496 221 aa7.61□□□□□ -1.19
CDC42BPA-211ENST00000466538 MTFR1Q15390 333 aa7.61□□□□□ -1.19
CDC42BPA-211ENST00000466538 TNS4Q8IZW8 715 aa7.61□□□□□ -1.19
CDC42BPA-211ENST00000466538 STAG2Q8N3U4 1231 aa7.61□□□□□ -1.19
CDC42BPA-211ENST00000466538 ESYT1Q9BSJ8 1104 aa7.61□□□□□ -1.19
CDC42BPA-211ENST00000466538 TOR4AQ9NXH8 423 aa7.61□□□□□ -1.19
CDC42BPA-211ENST00000466538 SERTAD1Q9UHV2 236 aa7.61□□□□□ -1.19
CDC42BPA-211ENST00000466538 SOWAHDA6NJG2 315 aa7.6□□□□□ -1.19
CDC42BPA-211ENST00000466538 CDK2AP1O14519 115 aa7.6□□□□□ -1.19
CDC42BPA-211ENST00000466538 PTGIRP43119 386 aa7.6□□□□□ -1.19
CDC42BPA-211ENST00000466538 RGS22Q8NE09 1264 aa7.6□□□□□ -1.19
CDC42BPA-211ENST00000466538 SCG3Q8WXD2 468 aaKnown RBP7.6□□□□□ -1.19
CDC42BPA-211ENST00000466538 J3QL48 77 aa7.59□□□□□ -1.19
CDC42BPA-211ENST00000466538 WDR4P57081 412 aaKnown RBP7.59□□□□□ -1.19
CDC42BPA-211ENST00000466538 FOXK2Q01167 660 aa7.59□□□□□ -1.19
CDC42BPA-211ENST00000466538 CLN3Q13286 438 aa7.59□□□□□ -1.19
CDC42BPA-211ENST00000466538 CNKSR1Q969H4 720 aa7.59□□□□□ -1.19
CDC42BPA-211ENST00000466538 ITPKCQ96DU7 683 aa7.59□□□□□ -1.19
CDC42BPA-211ENST00000466538 SCHIP1Q9P0W5 487 aaPredicted RBP7.59□□□□□ -1.19
CDC42BPA-211ENST00000466538 HRH3Q9Y5N1 445 aa7.59□□□□□ -1.19
CDC42BPA-211ENST00000466538 A0A1W2PRU2 124 aa7.58□□□□□ -1.2
CDC42BPA-211ENST00000466538 RGS20O76081 388 aa7.58□□□□□ -1.2
CDC42BPA-211ENST00000466538 ZIC2O95409 532 aaPredicted RBP7.58□□□□□ -1.2
CDC42BPA-211ENST00000466538 STAU1O95793 577 aaKnown RBP7.58□□□□□ -1.2
CDC42BPA-211ENST00000466538 IL2RAP01589 272 aa7.58□□□□□ -1.2
CDC42BPA-211ENST00000466538 SERPINB4P48594 390 aa7.58□□□□□ -1.2
CDC42BPA-211ENST00000466538 SF3B2Q13435 895 aaKnown RBP7.58□□□□□ -1.2
CDC42BPA-211ENST00000466538 FKBP5Q13451 457 aaPredicted RBP7.58□□□□□ -1.2
CDC42BPA-211ENST00000466538 KDF1Q8NAX2 398 aaPredicted RBP7.58□□□□□ -1.2
CDC42BPA-211ENST00000466538 ARHGEF10LQ9HCE6 1279 aa7.58□□□□□ -1.2
CDC42BPA-211ENST00000466538 C21orf2O43822 256 aa7.57□□□□□ -1.2
CDC42BPA-211ENST00000466538 ICMTO60725 284 aa7.57□□□□□ -1.2
CDC42BPA-211ENST00000466538 LGR5O75473 907 aa7.57□□□□□ -1.2
CDC42BPA-211ENST00000466538 TIMP2P16035 220 aa7.57□□□□□ -1.2
CDC42BPA-211ENST00000466538 SMPD1P17405 629 aa7.57□□□□□ -1.2
CDC42BPA-211ENST00000466538 ERCC3P19447 782 aa7.57□□□□□ -1.2
CDC42BPA-211ENST00000466538 CBLBQ13191 982 aa7.57□□□□□ -1.2
CDC42BPA-211ENST00000466538 NBPF15Q8N660 670 aa7.57□□□□□ -1.2
CDC42BPA-211ENST00000466538 VTI1AQ96AJ9 217 aa7.57□□□□□ -1.2
CDC42BPA-211ENST00000466538 TSPAN10Q9H1Z9 355 aaPredicted RBP7.57□□□□□ -1.2
CDC42BPA-211ENST00000466538 PPP1R12BO60237 982 aaPredicted RBP7.56□□□□□ -1.2
CDC42BPA-211ENST00000466538 SCNN1AP37088 669 aa7.56□□□□□ -1.2
CDC42BPA-211ENST00000466538 PSMA6P60900 246 aaKnown RBP7.56□□□□□ -1.2
CDC42BPA-211ENST00000466538 FKBP4Q02790 459 aaKnown RBP eCLIP7.56□□□□□ -1.2
CDC42BPA-211ENST00000466538 SLC9A9Q8IVB4 645 aa7.56□□□□□ -1.2
CDC42BPA-211ENST00000466538 GTF3C2Q8WUA4 911 aaPredicted RBP7.56□□□□□ -1.2
CDC42BPA-211ENST00000466538 NLRP3Q96P20 1036 aa7.56□□□□□ -1.2
CDC42BPA-211ENST00000466538 C2orf49Q9BVC5 232 aaPredicted RBP7.56□□□□□ -1.2
CDC42BPA-211ENST00000466538 RAB6BQ9NRW1 208 aa7.56□□□□□ -1.2
CDC42BPA-211ENST00000466538 CHMP3Q9Y3E7 222 aa7.56□□□□□ -1.2
CDC42BPA-211ENST00000466538 TNFRSF10AO00220 468 aa7.55□□□□□ -1.2
CDC42BPA-211ENST00000466538 ABL1P00519 1130 aa7.55□□□□□ -1.2
CDC42BPA-211ENST00000466538 GPC1P35052 558 aa7.55□□□□□ -1.2
CDC42BPA-211ENST00000466538 CENPCQ03188 943 aa7.55□□□□□ -1.2
CDC42BPA-211ENST00000466538 TLR1Q15399 786 aa7.55□□□□□ -1.2
CDC42BPA-211ENST00000466538 POTEAQ6S8J7 498 aa7.55□□□□□ -1.2
CDC42BPA-211ENST00000466538 ZFAND3Q9H8U3 227 aa7.55□□□□□ -1.2
CDC42BPA-211ENST00000466538 SEPT3Q9UH03 358 aa7.55□□□□□ -1.2
CDC42BPA-211ENST00000466538 AMOTL2Q9Y2J4 779 aa7.55□□□□□ -1.2
CDC42BPA-211ENST00000466538 TEAD4Q15561 434 aa7.54□□□□□ -1.2
CDC42BPA-211ENST00000466538 TRIM67Q6ZTA4 783 aa7.54□□□□□ -1.2
CDC42BPA-211ENST00000466538 NPM2Q86SE8 214 aaKnown RBP7.54□□□□□ -1.2
CDC42BPA-211ENST00000466538 PPARGC1BQ86YN6 1023 aaKnown RBP7.54□□□□□ -1.2
CDC42BPA-211ENST00000466538 CHMP7Q8WUX9 453 aaPredicted RBP7.54□□□□□ -1.2
CDC42BPA-211ENST00000466538 TSEN34Q9BSV6 310 aaKnown RBP7.54□□□□□ -1.2
CDC42BPA-211ENST00000466538 IQSEC3Q9UPP2 1182 aaPredicted RBP7.54□□□□□ -1.2
CDC42BPA-211ENST00000466538 NPR3P17342 541 aa7.53□□□□□ -1.2
CDC42BPA-211ENST00000466538 GTF2E1P29083 439 aaPredicted RBP7.53□□□□□ -1.2
CDC42BPA-211ENST00000466538 GLYCTKQ8IVS8 523 aa7.53□□□□□ -1.2
CDC42BPA-211ENST00000466538 MEIOBQ8N635 442 aa7.53□□□□□ -1.2
CDC42BPA-211ENST00000466538 HELQQ8TDG4 1101 aa7.53□□□□□ -1.2
CDC42BPA-211ENST00000466538 PURBQ96QR8 312 aaKnown RBP7.53□□□□□ -1.2
CDC42BPA-211ENST00000466538 MKNK1Q9BUB5 465 aa7.53□□□□□ -1.2
CDC42BPA-211ENST00000466538 FHDC1Q9C0D6 1143 aaPredicted RBP7.53□□□□□ -1.2
CDC42BPA-211ENST00000466538 BIN2Q9UBW5 565 aaPredicted RBP7.53□□□□□ -1.2
CDC42BPA-211ENST00000466538 MEN1O00255 615 aa7.52□□□□□ -1.21
CDC42BPA-211ENST00000466538 FAM13AO94988 1023 aa7.52□□□□□ -1.21
CDC42BPA-211ENST00000466538 HIRAP54198 1017 aaPredicted RBP7.52□□□□□ -1.21
CDC42BPA-211ENST00000466538 RELBQ01201 579 aa7.52□□□□□ -1.21
CDC42BPA-211ENST00000466538 NAA30Q147X3 362 aaPredicted RBP7.52□□□□□ -1.21
CDC42BPA-211ENST00000466538 C16orf46Q6P387 395 aa7.52□□□□□ -1.21
CDC42BPA-211ENST00000466538 CAPN12Q6ZSI9 719 aa7.52□□□□□ -1.21
CDC42BPA-211ENST00000466538 AGBL1Q96MI9 1066 aa7.52□□□□□ -1.21
CDC42BPA-211ENST00000466538 ZSCAN10Q96SZ4 725 aaPredicted RBP7.52□□□□□ -1.21
CDC42BPA-211ENST00000466538 DNMT3AQ9Y6K1 912 aaPredicted RBP7.52□□□□□ -1.21
CDC42BPA-211ENST00000466538 SERTM1A2A2V5 107 aa7.51□□□□□ -1.21
CDC42BPA-211ENST00000466538 UPP2O95045 317 aa7.51□□□□□ -1.21
CDC42BPA-211ENST00000466538 NOS2P35228 1153 aa7.51□□□□□ -1.21
CDC42BPA-211ENST00000466538 RNF144AP50876 292 aaPredicted RBP7.51□□□□□ -1.21
CDC42BPA-211ENST00000466538 MARSP56192 900 aaKnown RBP7.51□□□□□ -1.21
CDC42BPA-211ENST00000466538 HPS1Q92902 700 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms