RNA–Protein interactions for RNA: ENST00000466223.1

AGRN-204, Transcript of agrin, humanhuman

TSL 2

Gene AGRN, Length 459 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGRN-204ENST00000466223 LMOD3Q0VAK6 560 aa20.97■□□□□ 0.95
AGRN-204ENST00000466223 SLC27A3Q5K4L6 730 aa20.97■□□□□ 0.95
AGRN-204ENST00000466223 NBPF14Q5TI25 921 aa20.97■□□□□ 0.95
AGRN-204ENST00000466223 FAM9BQ8IZU0 186 aa20.97■□□□□ 0.95
AGRN-204ENST00000466223 DLG5Q8TDM6 1919 aa20.96■□□□□ 0.95
AGRN-204ENST00000466223 NEUROD2Q15784 382 aa20.96■□□□□ 0.95
AGRN-204ENST00000466223 MCM10Q7L590 875 aa20.96■□□□□ 0.95
AGRN-204ENST00000466223 PALLDQ8WX93 1383 aa20.96■□□□□ 0.95
AGRN-204ENST00000466223 PROM2Q8N271 834 aa20.95■□□□□ 0.94
AGRN-204ENST00000466223 ATG3Q9NT62 314 aa20.95■□□□□ 0.94
AGRN-204ENST00000466223 CCNL1Q9UK58 526 aaPredicted RBP20.95■□□□□ 0.94
AGRN-204ENST00000466223 ASAP1Q9ULH1 1129 aa20.95■□□□□ 0.94
AGRN-204ENST00000466223 ADAMTS7Q9UKP4 1686 aa20.95■□□□□ 0.94
AGRN-204ENST00000466223 RRP7AQ9Y3A4 280 aaKnown RBP20.94■□□□□ 0.94
AGRN-204ENST00000466223 CEMIPQ8WUJ3 1361 aa20.94■□□□□ 0.94
AGRN-204ENST00000466223 APAF1O14727 1248 aa20.93■□□□□ 0.94
AGRN-204ENST00000466223 DCTN1Q14203 1278 aa20.93■□□□□ 0.94
AGRN-204ENST00000466223 RREB1Q92766 1687 aa20.93■□□□□ 0.94
AGRN-204ENST00000466223 TTC5Q8N0Z6 440 aa20.92■□□□□ 0.94
AGRN-204ENST00000466223 MIER1Q8N108 512 aa20.92■□□□□ 0.94
AGRN-204ENST00000466223 RBM42Q9BTD8 480 aaKnown RBP20.92■□□□□ 0.94
AGRN-204ENST00000466223 MRC1P22897 1456 aa20.92■□□□□ 0.94
AGRN-204ENST00000466223 LY75O60449 1722 aa20.92■□□□□ 0.94
AGRN-204ENST00000466223 BTBD11A6QL63 1104 aa20.91■□□□□ 0.94
AGRN-204ENST00000466223 LOC102724428A0A0B4J2F2 783 aa20.9■□□□□ 0.94
AGRN-204ENST00000466223 SIK1P57059 783 aa20.9■□□□□ 0.94
AGRN-204ENST00000466223 TAF7Q15545 349 aaPredicted RBP20.9■□□□□ 0.94
AGRN-204ENST00000466223 PTCD1O75127 700 aaKnown RBP20.89■□□□□ 0.93
AGRN-204ENST00000466223 ATP6V1AP38606 617 aa20.89■□□□□ 0.93
AGRN-204ENST00000466223 STK32BQ9NY57 414 aa20.89■□□□□ 0.93
AGRN-204ENST00000466223 NUP188Q5SRE5 1749 aa20.89■□□□□ 0.93
AGRN-204ENST00000466223 SLC39A6Q13433 755 aa20.88■□□□□ 0.93
AGRN-204ENST00000466223 LRRC4BQ9NT99 713 aa20.88■□□□□ 0.93
AGRN-204ENST00000466223 KCNQ4P56696 695 aa20.87■□□□□ 0.93
AGRN-204ENST00000466223 ZNF790Q6PG37 636 aa20.87■□□□□ 0.93
AGRN-204ENST00000466223 THUMPD2Q9BTF0 503 aaKnown RBP20.86■□□□□ 0.93
AGRN-204ENST00000466223 SIPA1L3O60292 1781 aaPredicted RBP20.86■□□□□ 0.93
AGRN-204ENST00000466223 CALD1Q05682 793 aaKnown RBP20.85■□□□□ 0.93
AGRN-204ENST00000466223 TRIM35Q9UPQ4 493 aa20.85■□□□□ 0.93
AGRN-204ENST00000466223 R3HDM1Q15032 1099 aaKnown RBP20.83■□□□□ 0.93
AGRN-204ENST00000466223 SLC15A2Q16348 729 aa20.83■□□□□ 0.93
AGRN-204ENST00000466223 FMNL2Q96PY5 1086 aa20.83■□□□□ 0.93
AGRN-204ENST00000466223 NCBP3Q53F19 620 aaKnown RBP20.82■□□□□ 0.92
AGRN-204ENST00000466223 VSIG10Q8N0Z9 540 aa20.82■□□□□ 0.92
AGRN-204ENST00000466223 BABAM1Q9NWV8 329 aa20.82■□□□□ 0.92
AGRN-204ENST00000466223 PAPPAQ13219 1627 aa20.82■□□□□ 0.92
AGRN-204ENST00000466223 C5P01031 1676 aa20.81■□□□□ 0.92
AGRN-204ENST00000466223 NGEFQ8N5V2 710 aa20.81■□□□□ 0.92
AGRN-204ENST00000466223 AK7Q96M32 723 aa20.81■□□□□ 0.92
AGRN-204ENST00000466223 MIS18AQ9NYP9 233 aa20.81■□□□□ 0.92
AGRN-204ENST00000466223 TFCP2L1Q9NZI6 479 aa20.81■□□□□ 0.92
AGRN-204ENST00000466223 TSPYL4Q9UJ04 414 aa20.81■□□□□ 0.92
AGRN-204ENST00000466223 LAS1LQ9Y4W2 734 aaKnown RBP20.81■□□□□ 0.92
AGRN-204ENST00000466223 TAF1LQ8IZX4 1826 aa20.81■□□□□ 0.92
AGRN-204ENST00000466223 ZNF831Q5JPB2 1677 aa20.8■□□□□ 0.92
AGRN-204ENST00000466223 PSDA5PKW4 1024 aaPredicted RBP20.8■□□□□ 0.92
AGRN-204ENST00000466223 ITPK1Q13572 414 aa20.8■□□□□ 0.92
AGRN-204ENST00000466223 CCDC27Q2M243 656 aa20.8■□□□□ 0.92
AGRN-204ENST00000466223 ZNF496Q96IT1 587 aaPredicted RBP20.8■□□□□ 0.92
AGRN-204ENST00000466223 TEX13AQ9BXU3 409 aaPredicted RBP20.8■□□□□ 0.92
AGRN-204ENST00000466223 ANO8Q9HCE9 1232 aaPredicted RBP20.8■□□□□ 0.92
AGRN-204ENST00000466223 SENP3-EIF4A1A0A087X0R7 540 aa20.79■□□□□ 0.92
AGRN-204ENST00000466223 SLC4A9Q96Q91 983 aa20.79■□□□□ 0.92
AGRN-204ENST00000466223 SALL2Q9Y467 1007 aaPredicted RBP20.79■□□□□ 0.92
AGRN-204ENST00000466223 KCNQ3O43525 872 aa20.78■□□□□ 0.92
AGRN-204ENST00000466223 LINC00116Q8NCU8 138 aa20.78■□□□□ 0.92
AGRN-204ENST00000466223 AKT1S1Q96B36 256 aa20.78■□□□□ 0.92
AGRN-204ENST00000466223 UBR2Q8IWV8 1755 aa20.77■□□□□ 0.92
AGRN-204ENST00000466223 HEG1Q9ULI3 1381 aa20.77■□□□□ 0.92
AGRN-204ENST00000466223 STARD3NLO95772 234 aa20.77■□□□□ 0.92
AGRN-204ENST00000466223 ZNF827Q17R98 1081 aa20.77■□□□□ 0.92
AGRN-204ENST00000466223 DNAJC10Q8IXB1 793 aa20.77■□□□□ 0.92
AGRN-204ENST00000466223 KCPQ6ZWJ8 1503 aa20.77■□□□□ 0.92
AGRN-204ENST00000466223 C4BP0C0L5 1744 aa20.76■□□□□ 0.91
AGRN-204ENST00000466223 SNRPA1P09661 255 aaKnown RBP20.76■□□□□ 0.91
AGRN-204ENST00000466223 GNAI1P63096 354 aa20.76■□□□□ 0.91
AGRN-204ENST00000466223 RC3H1Q5TC82 1133 aaKnown RBP20.76■□□□□ 0.91
AGRN-204ENST00000466223 WWC1Q8IX03 1113 aa20.76■□□□□ 0.91
AGRN-204ENST00000466223 FLAD1Q8NFF5 587 aa20.76■□□□□ 0.91
AGRN-204ENST00000466223 CFAP44Q96MT7 982 aa20.76■□□□□ 0.91
AGRN-204ENST00000466223 CHL1O00533 1208 aa20.74■□□□□ 0.91
AGRN-204ENST00000466223 GNPATO15228 680 aa20.74■□□□□ 0.91
AGRN-204ENST00000466223 IFT57Q9NWB7 429 aa20.74■□□□□ 0.91
AGRN-204ENST00000466223 KDM3BQ7LBC6 1761 aa20.74■□□□□ 0.91
AGRN-204ENST00000466223 CNTNAP4Q9C0A0 1308 aa20.74■□□□□ 0.91
AGRN-204ENST00000466223 MSH5O43196 834 aa20.73■□□□□ 0.91
AGRN-204ENST00000466223 EIF4A1P60842 406 aaKnown RBP20.73■□□□□ 0.91
AGRN-204ENST00000466223 RTCBQ9Y3I0 505 aaKnown RBP20.73■□□□□ 0.91
AGRN-204ENST00000466223 COL5A3P25940 1745 aaPredicted RBP20.73■□□□□ 0.91
AGRN-204ENST00000466223 TJP1Q07157 1748 aa20.73■□□□□ 0.91
AGRN-204ENST00000466223 CYP19A1P11511 503 aaPredicted RBP20.72■□□□□ 0.91
AGRN-204ENST00000466223 CRKLP46109 303 aaKnown RBP20.72■□□□□ 0.91
AGRN-204ENST00000466223 WDR63Q8IWG1 891 aa20.72■□□□□ 0.91
AGRN-204ENST00000466223 CICQ96RK0 1608 aaPredicted RBP20.71■□□□□ 0.91
AGRN-204ENST00000466223 CCDC87Q9NVE4 849 aa20.71■□□□□ 0.91
AGRN-204ENST00000466223 PHF14O94880 888 aa20.7■□□□□ 0.9
AGRN-204ENST00000466223 SSFA2P28290 1259 aa20.7■□□□□ 0.9
AGRN-204ENST00000466223 TRAPPC3LQ5T215 181 aa20.7■□□□□ 0.9
AGRN-204ENST00000466223 NPM2Q86SE8 214 aaKnown RBP20.7■□□□□ 0.9
AGRN-204ENST00000466223 IL16Q14005 1332 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms