RNA–Protein interactions for RNA: ENST00000465950.5

SCAF11-205, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 5,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-205ENST00000465950 ABCC5O15440 1437 aa11.36□□□□□ -0.59
SCAF11-205ENST00000465950 ST18O60284 1047 aa11.36□□□□□ -0.59
SCAF11-205ENST00000465950 SYCP2Q9BX26 1530 aa11.36□□□□□ -0.59
SCAF11-205ENST00000465950 H3BQV1 296 aa11.36□□□□□ -0.59
SCAF11-205ENST00000465950 IFFO2Q5TF58 517 aa11.36□□□□□ -0.59
SCAF11-205ENST00000465950 PAF1Q8N7H5 531 aa11.36□□□□□ -0.59
SCAF11-205ENST00000465950 NOL8Q76FK4 1167 aaKnown RBP11.36□□□□□ -0.59
SCAF11-205ENST00000465950 LARGE2Q8N3Y3 721 aa11.35□□□□□ -0.59
SCAF11-205ENST00000465950 RCAN3Q9UKA8 241 aa11.35□□□□□ -0.59
SCAF11-205ENST00000465950 PSMA5P28066 241 aa11.35□□□□□ -0.59
SCAF11-205ENST00000465950 SLC12A5Q9H2X9 1139 aa11.35□□□□□ -0.59
SCAF11-205ENST00000465950 NUP153P49790 1475 aaKnown RBP11.35□□□□□ -0.59
SCAF11-205ENST00000465950 ABCA5Q8WWZ7 1642 aa11.35□□□□□ -0.59
SCAF11-205ENST00000465950 AKAP4Q5JQC9 854 aa11.35□□□□□ -0.59
SCAF11-205ENST00000465950 SPC25Q9HBM1 224 aa11.35□□□□□ -0.59
SCAF11-205ENST00000465950 MAP3K12Q12852 859 aa11.35□□□□□ -0.59
SCAF11-205ENST00000465950 CNTROBQ8N137 903 aa11.35□□□□□ -0.59
SCAF11-205ENST00000465950 SYAP1Q96A49 352 aaPredicted RBP11.35□□□□□ -0.59
SCAF11-205ENST00000465950 DCPSQ96C86 337 aaKnown RBP11.34□□□□□ -0.59
SCAF11-205ENST00000465950 GJA3Q9Y6H8 435 aa11.34□□□□□ -0.59
SCAF11-205ENST00000465950 AFF2P51816 1311 aa11.34□□□□□ -0.59
SCAF11-205ENST00000465950 GNAI2P04899 355 aa11.34□□□□□ -0.59
SCAF11-205ENST00000465950 TSR1Q2NL82 804 aaKnown RBP11.34□□□□□ -0.59
SCAF11-205ENST00000465950 ABCC11Q96J66 1382 aa11.34□□□□□ -0.59
SCAF11-205ENST00000465950 TTF1Q15361 905 aaPredicted RBP11.34□□□□□ -0.59
SCAF11-205ENST00000465950 CWC25Q9NXE8 425 aaPredicted RBP11.34□□□□□ -0.59
SCAF11-205ENST00000465950 IVNS1ABPQ9Y6Y0 642 aa11.34□□□□□ -0.59
SCAF11-205ENST00000465950 UQCRFS1P1P0C7P4 283 aa11.33□□□□□ -0.6
SCAF11-205ENST00000465950 SCLT1Q96NL6 688 aa11.33□□□□□ -0.6
SCAF11-205ENST00000465950 RILPL2Q969X0 211 aa11.33□□□□□ -0.6
SCAF11-205ENST00000465950 PICK1Q9NRD5 415 aa11.33□□□□□ -0.6
SCAF11-205ENST00000465950 TMOD4Q9NZQ9 345 aa11.33□□□□□ -0.6
SCAF11-205ENST00000465950 UGGT1Q9NYU2 1555 aa11.33□□□□□ -0.6
SCAF11-205ENST00000465950 IQCA1LA6NCM1 817 aa11.33□□□□□ -0.6
SCAF11-205ENST00000465950 RDXP35241 583 aaKnown RBP11.33□□□□□ -0.6
SCAF11-205ENST00000465950 MLH3Q9UHC1 1453 aa11.33□□□□□ -0.6
SCAF11-205ENST00000465950 ANKRD36BQ8N2N9 1353 aa11.33□□□□□ -0.6
SCAF11-205ENST00000465950 TWISTNBQ3B726 338 aaPredicted RBP11.32□□□□□ -0.6
SCAF11-205ENST00000465950 PNMA2Q9UL42 364 aa11.32□□□□□ -0.6
SCAF11-205ENST00000465950 MVPQ14764 893 aaKnown RBP11.32□□□□□ -0.6
SCAF11-205ENST00000465950 APBB1IPQ7Z5R6 666 aaPredicted RBP11.32□□□□□ -0.6
SCAF11-205ENST00000465950 SOS1Q07889 1333 aaPredicted RBP11.32□□□□□ -0.6
SCAF11-205ENST00000465950 ZNF76P36508 570 aa11.32□□□□□ -0.6
SCAF11-205ENST00000465950 TXLNAP40222 546 aa11.32□□□□□ -0.6
SCAF11-205ENST00000465950 TPD52L1Q16890 204 aaPredicted RBP11.32□□□□□ -0.6
SCAF11-205ENST00000465950 ERICH6BQ5W0A0 696 aa11.32□□□□□ -0.6
SCAF11-205ENST00000465950 SEPT12Q8IYM1 358 aa11.32□□□□□ -0.6
SCAF11-205ENST00000465950 FLT4P35916 1363 aa11.32□□□□□ -0.6
SCAF11-205ENST00000465950 CTTNBP2Q8WZ74 1663 aa11.32□□□□□ -0.6
SCAF11-205ENST00000465950 EAPPQ56P03 285 aaPredicted RBP11.32□□□□□ -0.6
SCAF11-205ENST00000465950 DZIP1LQ8IYY4 767 aaKnown RBP11.32□□□□□ -0.6
SCAF11-205ENST00000465950 CDK5RAP3Q96JB5 506 aa11.32□□□□□ -0.6
SCAF11-205ENST00000465950 NIP7Q9Y221 180 aaKnown RBP eCLIP11.32□□□□□ -0.6
SCAF11-205ENST00000465950 PTPN23Q9H3S7 1636 aa11.32□□□□□ -0.6
SCAF11-205ENST00000465950 IP6K1Q92551 441 aa11.31□□□□□ -0.6
SCAF11-205ENST00000465950 SULF1Q8IWU6 871 aa11.31□□□□□ -0.6
SCAF11-205ENST00000465950 DRC1Q96MC2 740 aa11.31□□□□□ -0.6
SCAF11-205ENST00000465950 MYCNP04198 464 aaPredicted RBP11.31□□□□□ -0.6
SCAF11-205ENST00000465950 DCAF15Q66K64 600 aa11.31□□□□□ -0.6
SCAF11-205ENST00000465950 CFAP43Q8NDM7 1665 aa11.31□□□□□ -0.6
SCAF11-205ENST00000465950 KIF4AO95239 1232 aa11.31□□□□□ -0.6
SCAF11-205ENST00000465950 TPM1P09493 284 aa11.31□□□□□ -0.6
SCAF11-205ENST00000465950 RGS3P49796 1198 aa11.31□□□□□ -0.6
SCAF11-205ENST00000465950 RRS1Q15050 365 aaKnown RBP11.31□□□□□ -0.6
SCAF11-205ENST00000465950 DZIP3Q86Y13 1208 aaKnown RBP11.31□□□□□ -0.6
SCAF11-205ENST00000465950 FSD1Q9BTV5 496 aa11.31□□□□□ -0.6
SCAF11-205ENST00000465950 RNF41Q9H4P4 317 aaPredicted RBP11.31□□□□□ -0.6
SCAF11-205ENST00000465950 A2ML1A8K2U0 1454 aa11.31□□□□□ -0.6
SCAF11-205ENST00000465950 ZNF444Q8N0Y2 327 aaPredicted RBP11.3□□□□□ -0.6
SCAF11-205ENST00000465950 KIF7Q2M1P5 1343 aa11.3□□□□□ -0.6
SCAF11-205ENST00000465950 PCF11O94913 1555 aaKnown RBP11.3□□□□□ -0.6
SCAF11-205ENST00000465950 CCDC174Q6PII3 467 aa11.3□□□□□ -0.6
SCAF11-205ENST00000465950 MKNK2Q9HBH9 465 aa11.3□□□□□ -0.6
SCAF11-205ENST00000465950 CSADQ9Y600 493 aa11.3□□□□□ -0.6
SCAF11-205ENST00000465950 TRIM22Q8IYM9 498 aa11.3□□□□□ -0.6
SCAF11-205ENST00000465950 SLC16A10Q8TF71 515 aa11.3□□□□□ -0.6
SCAF11-205ENST00000465950 KDM5DQ9BY66 1539 aa11.3□□□□□ -0.6
SCAF11-205ENST00000465950 PTMAP06454 111 aaKnown RBP11.29□□□□□ -0.6
SCAF11-205ENST00000465950 PPP4R2Q9NY27 417 aa11.29□□□□□ -0.6
SCAF11-205ENST00000465950 TDO2P48775 406 aa11.29□□□□□ -0.6
SCAF11-205ENST00000465950 SLC27A3Q5K4L6 730 aa11.29□□□□□ -0.6
SCAF11-205ENST00000465950 ARMC9Q7Z3E5 817 aa11.29□□□□□ -0.6
SCAF11-205ENST00000465950 YTHDC2Q9H6S0 1430 aaKnown RBP11.29□□□□□ -0.6
SCAF11-205ENST00000465950 APAF1O14727 1248 aa11.29□□□□□ -0.6
SCAF11-205ENST00000465950 PDE3AQ14432 1141 aa11.29□□□□□ -0.6
SCAF11-205ENST00000465950 DALRD3Q5D0E6 543 aaKnown RBP11.29□□□□□ -0.6
SCAF11-205ENST00000465950 SEC63Q9UGP8 760 aaKnown RBP11.29□□□□□ -0.6
SCAF11-205ENST00000465950 SURF6O75683 361 aaKnown RBP11.29□□□□□ -0.6
SCAF11-205ENST00000465950 UBAC1Q9BSL1 405 aa11.29□□□□□ -0.6
SCAF11-205ENST00000465950 ZNF335Q9H4Z2 1342 aaPredicted RBP11.29□□□□□ -0.6
SCAF11-205ENST00000465950 HOXD10P28358 340 aa11.28□□□□□ -0.6
SCAF11-205ENST00000465950 ELMSAN1Q6PJG2 1045 aa11.28□□□□□ -0.6
SCAF11-205ENST00000465950 NCBP1Q09161 790 aaKnown RBP11.28□□□□□ -0.6
SCAF11-205ENST00000465950 WDR63Q8IWG1 891 aa11.28□□□□□ -0.6
SCAF11-205ENST00000465950 EFCAB6Q5THR3 1501 aa11.28□□□□□ -0.6
SCAF11-205ENST00000465950 PPP1R12BO60237 982 aaPredicted RBP11.28□□□□□ -0.6
SCAF11-205ENST00000465950 FAM83GA6ND36 823 aa11.28□□□□□ -0.6
SCAF11-205ENST00000465950 AS3MTQ9HBK9 375 aa11.28□□□□□ -0.6
SCAF11-205ENST00000465950 USP48Q86UV5 1035 aa11.27□□□□□ -0.6
SCAF11-205ENST00000465950 NME9Q86XW9 330 aa11.27□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms