RNA–Protein interactions for RNA: ENST00000465457.1

HDAC6-215, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-215ENST00000465457 C4AP0C0L4 1744 aa18.74■□□□□ 0.59
HDAC6-215ENST00000465457 CGNL1Q0VF96 1302 aa18.74■□□□□ 0.59
HDAC6-215ENST00000465457 MMP10P09238 476 aa18.73■□□□□ 0.59
HDAC6-215ENST00000465457 TATP17735 454 aaPredicted RBP18.73■□□□□ 0.59
HDAC6-215ENST00000465457 SSFA2P28290 1259 aa18.73■□□□□ 0.59
HDAC6-215ENST00000465457 ITPK1Q13572 414 aa18.73■□□□□ 0.59
HDAC6-215ENST00000465457 PIGBQ92521 554 aa18.73■□□□□ 0.59
HDAC6-215ENST00000465457 YTHDC1Q96MU7 727 aaKnown RBP18.73■□□□□ 0.59
HDAC6-215ENST00000465457 KCPQ6ZWJ8 1503 aa18.73■□□□□ 0.59
HDAC6-215ENST00000465457 SMG6Q86US8 1419 aaKnown RBP18.73■□□□□ 0.59
HDAC6-215ENST00000465457 NSD3Q9BZ95 1437 aa18.73■□□□□ 0.59
HDAC6-215ENST00000465457 A0A0G2JLW4 131 aa18.72■□□□□ 0.59
HDAC6-215ENST00000465457 HSP90AB2PQ58FF8 381 aa18.72■□□□□ 0.59
HDAC6-215ENST00000465457 KLRG1Q96E93 195 aa18.72■□□□□ 0.59
HDAC6-215ENST00000465457 COL5A3P25940 1745 aaPredicted RBP18.71■□□□□ 0.59
HDAC6-215ENST00000465457 SBF1O95248 1867 aa18.71■□□□□ 0.59
HDAC6-215ENST00000465457 GNPATO15228 680 aa18.71■□□□□ 0.59
HDAC6-215ENST00000465457 JMYQ8N9B5 988 aa18.71■□□□□ 0.59
HDAC6-215ENST00000465457 TNRC6CQ9HCJ0 1690 aaKnown RBP18.7■□□□□ 0.58
HDAC6-215ENST00000465457 LOC102724428A0A0B4J2F2 783 aa18.7■□□□□ 0.58
HDAC6-215ENST00000465457 SIK1P57059 783 aa18.7■□□□□ 0.58
HDAC6-215ENST00000465457 GGNBP2Q9H3C7 697 aa18.7■□□□□ 0.58
HDAC6-215ENST00000465457 PRKRIP1Q9H875 184 aaPredicted RBP18.7■□□□□ 0.58
HDAC6-215ENST00000465457 ARHGAP27Q6ZUM4 889 aa18.69■□□□□ 0.58
HDAC6-215ENST00000465457 SMARCC1Q92922 1105 aaPredicted RBP18.69■□□□□ 0.58
HDAC6-215ENST00000465457 MYH14Q7Z406 1995 aaKnown RBP18.68■□□□□ 0.58
HDAC6-215ENST00000465457 RBM46Q8TBY0 533 aaKnown RBP18.68■□□□□ 0.58
HDAC6-215ENST00000465457 POLR3GLQ9BT43 218 aa18.68■□□□□ 0.58
HDAC6-215ENST00000465457 ASAP1Q9ULH1 1129 aa18.68■□□□□ 0.58
HDAC6-215ENST00000465457 INSRP06213 1382 aa18.68■□□□□ 0.58
HDAC6-215ENST00000465457 ANKRD26Q9UPS8 1709 aa18.67■□□□□ 0.58
HDAC6-215ENST00000465457 DPEP1P16444 411 aa18.67■□□□□ 0.58
HDAC6-215ENST00000465457 TNS4Q8IZW8 715 aa18.67■□□□□ 0.58
HDAC6-215ENST00000465457 NCAPD2Q15021 1401 aa18.66■□□□□ 0.58
HDAC6-215ENST00000465457 C9orf131Q5VYM1 1079 aa18.66■□□□□ 0.58
HDAC6-215ENST00000465457 FYB1O15117 783 aa18.65■□□□□ 0.58
HDAC6-215ENST00000465457 FLT4P35916 1363 aa18.65■□□□□ 0.58
HDAC6-215ENST00000465457 KDRP35968 1356 aa18.65■□□□□ 0.58
HDAC6-215ENST00000465457 FCHSD2O94868 740 aa18.64■□□□□ 0.57
HDAC6-215ENST00000465457 PRELPP51888 382 aa18.64■□□□□ 0.57
HDAC6-215ENST00000465457 ATP6V1AP38606 617 aa18.63■□□□□ 0.57
HDAC6-215ENST00000465457 TGFB2P61812 414 aa18.63■□□□□ 0.57
HDAC6-215ENST00000465457 ZNF831Q5JPB2 1677 aa18.63■□□□□ 0.57
HDAC6-215ENST00000465457 KCNA3P22001 575 aa18.62■□□□□ 0.57
HDAC6-215ENST00000465457 NKX1-1Q15270 411 aaPredicted RBP18.62■□□□□ 0.57
HDAC6-215ENST00000465457 PUS7Q96PZ0 661 aaKnown RBP18.62■□□□□ 0.57
HDAC6-215ENST00000465457 SLC4A9Q96Q91 983 aa18.62■□□□□ 0.57
HDAC6-215ENST00000465457 PLEKHG2Q9H7P9 1386 aa18.62■□□□□ 0.57
HDAC6-215ENST00000465457 RALBP1Q15311 655 aa18.61■□□□□ 0.57
HDAC6-215ENST00000465457 C16orf71Q8IYS4 520 aaPredicted RBP18.61■□□□□ 0.57
HDAC6-215ENST00000465457 EMILIN1Q9Y6C2 1016 aa18.61■□□□□ 0.57
HDAC6-215ENST00000465457 FSTL1Q12841 308 aa18.6■□□□□ 0.57
HDAC6-215ENST00000465457 ATG3Q9NT62 314 aa18.6■□□□□ 0.57
HDAC6-215ENST00000465457 TMOD3Q9NYL9 352 aa18.6■□□□□ 0.57
HDAC6-215ENST00000465457 TIAM2Q8IVF5 1701 aa18.6■□□□□ 0.57
HDAC6-215ENST00000465457 CCDC88AQ3V6T2 1871 aa18.59■□□□□ 0.57
HDAC6-215ENST00000465457 GYS1P13807 737 aa18.59■□□□□ 0.57
HDAC6-215ENST00000465457 HMGB2P26583 209 aaKnown RBP18.59■□□□□ 0.57
HDAC6-215ENST00000465457 RRAGCQ9HB90 399 aa18.59■□□□□ 0.57
HDAC6-215ENST00000465457 RNF181Q9P0P0 153 aa18.58■□□□□ 0.56
HDAC6-215ENST00000465457 HSPA1AP0DMV8 641 aaKnown RBP18.57■□□□□ 0.56
HDAC6-215ENST00000465457 HSPA1BP0DMV9 641 aaKnown RBP18.57■□□□□ 0.56
HDAC6-215ENST00000465457 ARHGEF1Q92888 912 aaKnown RBP18.57■□□□□ 0.56
HDAC6-215ENST00000465457 DCAF5Q96JK2 942 aa18.57■□□□□ 0.56
HDAC6-215ENST00000465457 CCDC87Q9NVE4 849 aa18.57■□□□□ 0.56
HDAC6-215ENST00000465457 ADAMTS7Q9UKP4 1686 aa18.57■□□□□ 0.56
HDAC6-215ENST00000465457 TRAPPC3LQ5T215 181 aa18.56■□□□□ 0.56
HDAC6-215ENST00000465457 RTCBQ9Y3I0 505 aaKnown RBP18.56■□□□□ 0.56
HDAC6-215ENST00000465457 TJP1Q07157 1748 aa18.56■□□□□ 0.56
HDAC6-215ENST00000465457 PHKG2P15735 406 aa18.55■□□□□ 0.56
HDAC6-215ENST00000465457 NLGN1Q8N2Q7 840 aa18.55■□□□□ 0.56
HDAC6-215ENST00000465457 KIF24Q5T7B8 1368 aa18.55■□□□□ 0.56
HDAC6-215ENST00000465457 KDM2BQ8NHM5 1336 aa18.54■□□□□ 0.56
HDAC6-215ENST00000465457 MYBBP1AQ9BQG0 1328 aaKnown RBP18.54■□□□□ 0.56
HDAC6-215ENST00000465457 AFDNP55196 1824 aaKnown RBP18.54■□□□□ 0.56
HDAC6-215ENST00000465457 CHRNA5P30532 468 aa18.54■□□□□ 0.56
HDAC6-215ENST00000465457 DDR1Q08345 913 aa18.54■□□□□ 0.56
HDAC6-215ENST00000465457 MRS2Q9HD23 443 aa18.54■□□□□ 0.56
HDAC6-215ENST00000465457 SPG7Q9UQ90 795 aa18.54■□□□□ 0.56
HDAC6-215ENST00000465457 DLEC1Q9Y238 1755 aa18.53■□□□□ 0.56
HDAC6-215ENST00000465457 PER1O15534 1290 aaPredicted RBP18.53■□□□□ 0.56
HDAC6-215ENST00000465457 RASSF7Q02833 373 aa18.53■□□□□ 0.56
HDAC6-215ENST00000465457 PARP3Q9Y6F1 533 aa18.53■□□□□ 0.56
HDAC6-215ENST00000465457 NPC1L1Q9UHC9 1359 aa18.53■□□□□ 0.56
HDAC6-215ENST00000465457 SMC1BQ8NDV3 1235 aa18.52■□□□□ 0.56
HDAC6-215ENST00000465457 EYA1Q99502 592 aa18.52■□□□□ 0.56
HDAC6-215ENST00000465457 RBM42Q9BTD8 480 aaKnown RBP18.52■□□□□ 0.56
HDAC6-215ENST00000465457 PIM2Q9P1W9 311 aa18.52■□□□□ 0.56
HDAC6-215ENST00000465457 SRP68Q9UHB9 627 aaKnown RBP18.52■□□□□ 0.56
HDAC6-215ENST00000465457 CNTNAP4Q9C0A0 1308 aa18.51■□□□□ 0.55
HDAC6-215ENST00000465457 PPM1GO15355 546 aaPredicted RBP18.51■□□□□ 0.55
HDAC6-215ENST00000465457 PANK3Q9H999 370 aa18.51■□□□□ 0.55
HDAC6-215ENST00000465457 KDM6AO15550 1401 aaPredicted RBP18.5■□□□□ 0.55
HDAC6-215ENST00000465457 RFC4P35249 363 aa18.5■□□□□ 0.55
HDAC6-215ENST00000465457 DALRD3Q5D0E6 543 aaKnown RBP18.5■□□□□ 0.55
HDAC6-215ENST00000465457 ADRA2BP18089 450 aa18.49■□□□□ 0.55
HDAC6-215ENST00000465457 FKBP8Q14318 412 aa18.49■□□□□ 0.55
HDAC6-215ENST00000465457 IFNL2Q8IZJ0 200 aa18.49■□□□□ 0.55
HDAC6-215ENST00000465457 RPS6KA4O75676 772 aa18.48■□□□□ 0.55
HDAC6-215ENST00000465457 CARD14Q9BXL6 1004 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms