RNA–Protein interactions for RNA: ENST00000464290.5

CRAT-208, Transcript of carnitine O-acetyltransferase, humanhuman

TSL 3

Gene CRAT, Length 867 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAT-208ENST00000464290 ERVV-2B6SEH9 535 aa19.82■□□□□ 0.76
CRAT-208ENST00000464290 NFATC2IPQ8NCF5 419 aa19.82■□□□□ 0.76
CRAT-208ENST00000464290 BABAM1Q9NWV8 329 aa19.82■□□□□ 0.76
CRAT-208ENST00000464290 TSPYL4Q9UJ04 414 aa19.82■□□□□ 0.76
CRAT-208ENST00000464290 MRC1P22897 1456 aa19.81■□□□□ 0.76
CRAT-208ENST00000464290 SIPA1L3O60292 1781 aaPredicted RBP19.8■□□□□ 0.76
CRAT-208ENST00000464290 TOGARAM1Q9Y4F4 1720 aa19.8■□□□□ 0.76
CRAT-208ENST00000464290 RXRBP28702 533 aa19.8■□□□□ 0.76
CRAT-208ENST00000464290 CABP4P57796 275 aa19.8■□□□□ 0.76
CRAT-208ENST00000464290 BTBD11A6QL63 1104 aa19.79■□□□□ 0.76
CRAT-208ENST00000464290 EXOSC9Q06265 439 aaKnown RBP19.79■□□□□ 0.76
CRAT-208ENST00000464290 KCNQ3O43525 872 aa19.78■□□□□ 0.76
CRAT-208ENST00000464290 KAT6BQ8WYB5 2073 aa19.76■□□□□ 0.75
CRAT-208ENST00000464290 C8orf58Q8NAV2 365 aa19.76■□□□□ 0.75
CRAT-208ENST00000464290 PRIM1P49642 420 aaKnown RBP19.75■□□□□ 0.75
CRAT-208ENST00000464290 SLC39A6Q13433 755 aa19.75■□□□□ 0.75
CRAT-208ENST00000464290 KRT24Q2M2I5 525 aa19.75■□□□□ 0.75
CRAT-208ENST00000464290 FAM182BQ5T319 152 aa19.75■□□□□ 0.75
CRAT-208ENST00000464290 TSPYL6Q8N831 410 aa19.75■□□□□ 0.75
CRAT-208ENST00000464290 PIGBQ92521 554 aa19.75■□□□□ 0.75
CRAT-208ENST00000464290 ACSBG1Q96GR2 724 aa19.75■□□□□ 0.75
CRAT-208ENST00000464290 TMOD3Q9NYL9 352 aa19.75■□□□□ 0.75
CRAT-208ENST00000464290 KDM3BQ7LBC6 1761 aa19.75■□□□□ 0.75
CRAT-208ENST00000464290 ITGB4P16144 1822 aa19.74■□□□□ 0.75
CRAT-208ENST00000464290 BRWD3Q6RI45 1802 aa19.74■□□□□ 0.75
CRAT-208ENST00000464290 EIF4A1P60842 406 aaKnown RBP19.73■□□□□ 0.75
CRAT-208ENST00000464290 ZNF790Q6PG37 636 aa19.73■□□□□ 0.75
CRAT-208ENST00000464290 KRT27Q7Z3Y8 459 aa19.73■□□□□ 0.75
CRAT-208ENST00000464290 DOT1LQ8TEK3 1739 aa19.73■□□□□ 0.75
CRAT-208ENST00000464290 ELL2O00472 640 aaPredicted RBP19.72■□□□□ 0.75
CRAT-208ENST00000464290 BCL9O00512 1426 aa19.72■□□□□ 0.75
CRAT-208ENST00000464290 SYTL4Q96C24 671 aaPredicted RBP19.72■□□□□ 0.75
CRAT-208ENST00000464290 RGS12O14924 1447 aa19.71■□□□□ 0.75
CRAT-208ENST00000464290 KCNQ2O43526 872 aa19.71■□□□□ 0.75
CRAT-208ENST00000464290 VAMP4O75379 141 aa19.71■□□□□ 0.75
CRAT-208ENST00000464290 RCAN3Q9UKA8 241 aa19.71■□□□□ 0.75
CRAT-208ENST00000464290 CT47B1P0C2W7 299 aaPredicted RBP19.7■□□□□ 0.74
CRAT-208ENST00000464290 TWISTNBQ3B726 338 aaPredicted RBP19.7■□□□□ 0.74
CRAT-208ENST00000464290 ATG3Q9NT62 314 aa19.7■□□□□ 0.74
CRAT-208ENST00000464290 HEG1Q9ULI3 1381 aa19.7■□□□□ 0.74
CRAT-208ENST00000464290 ASAP1Q9ULH1 1129 aa19.69■□□□□ 0.74
CRAT-208ENST00000464290 PTF1AQ7RTS3 328 aa19.68■□□□□ 0.74
CRAT-208ENST00000464290 TTC5Q8N0Z6 440 aa19.68■□□□□ 0.74
CRAT-208ENST00000464290 ZNF496Q96IT1 587 aaPredicted RBP19.68■□□□□ 0.74
CRAT-208ENST00000464290 PAPPAQ13219 1627 aa19.68■□□□□ 0.74
CRAT-208ENST00000464290 RARSP54136 660 aaKnown RBP19.67■□□□□ 0.74
CRAT-208ENST00000464290 EP400Q96L91 3159 aa19.67■□□□□ 0.74
CRAT-208ENST00000464290 GIGYF1O75420 1035 aaPredicted RBP19.66■□□□□ 0.74
CRAT-208ENST00000464290 FAM196AQ6ZSG2 479 aa19.66■□□□□ 0.74
CRAT-208ENST00000464290 KCPQ6ZWJ8 1503 aa19.66■□□□□ 0.74
CRAT-208ENST00000464290 PRAMEF22A3QJZ6 481 aa19.65■□□□□ 0.74
CRAT-208ENST00000464290 SSH1Q8WYL5 1049 aa19.65■□□□□ 0.74
CRAT-208ENST00000464290 FMNL2Q96PY5 1086 aa19.65■□□□□ 0.74
CRAT-208ENST00000464290 SUPT16HQ9Y5B9 1047 aaKnown RBP19.65■□□□□ 0.74
CRAT-208ENST00000464290 SBF2Q86WG5 1849 aa19.65■□□□□ 0.74
CRAT-208ENST00000464290 BCAR3O75815 825 aa19.64■□□□□ 0.73
CRAT-208ENST00000464290 ZNF428Q96B54 188 aa19.64■□□□□ 0.73
CRAT-208ENST00000464290 SOS1Q07889 1333 aaPredicted RBP19.64■□□□□ 0.73
CRAT-208ENST00000464290 UBR2Q8IWV8 1755 aa19.64■□□□□ 0.73
CRAT-208ENST00000464290 NHSQ6T4R5 1651 aa19.63■□□□□ 0.73
CRAT-208ENST00000464290 PTCD1O75127 700 aaKnown RBP19.63■□□□□ 0.73
CRAT-208ENST00000464290 HOXB7P09629 217 aa19.63■□□□□ 0.73
CRAT-208ENST00000464290 TCERG1O14776 1098 aaKnown RBP19.62■□□□□ 0.73
CRAT-208ENST00000464290 ALDH1L2Q3SY69 923 aa19.62■□□□□ 0.73
CRAT-208ENST00000464290 BCL2L13Q9BXK5 485 aa19.62■□□□□ 0.73
CRAT-208ENST00000464290 RNF123Q5XPI4 1314 aa19.61■□□□□ 0.73
CRAT-208ENST00000464290 SNRPA1P09661 255 aaKnown RBP19.61■□□□□ 0.73
CRAT-208ENST00000464290 SLC4A9Q96Q91 983 aa19.61■□□□□ 0.73
CRAT-208ENST00000464290 BCL11BQ9C0K0 894 aaPredicted RBP19.61■□□□□ 0.73
CRAT-208ENST00000464290 EIF2S2P20042 333 aaKnown RBP19.6■□□□□ 0.73
CRAT-208ENST00000464290 MRPL50Q8N5N7 158 aaKnown RBP19.6■□□□□ 0.73
CRAT-208ENST00000464290 NECTIN2Q92692 538 aa19.6■□□□□ 0.73
CRAT-208ENST00000464290 HDGFL1Q5TGJ6 251 aa19.59■□□□□ 0.73
CRAT-208ENST00000464290 SMARCC1Q92922 1105 aaPredicted RBP19.59■□□□□ 0.73
CRAT-208ENST00000464290 RBM42Q9BTD8 480 aaKnown RBP19.59■□□□□ 0.73
CRAT-208ENST00000464290 SMC4Q9NTJ3 1288 aa19.59■□□□□ 0.73
CRAT-208ENST00000464290 USP16Q9Y5T5 823 aa19.59■□□□□ 0.73
CRAT-208ENST00000464290 C5P01031 1676 aa19.59■□□□□ 0.73
CRAT-208ENST00000464290 BTAF1O14981 1849 aa19.58■□□□□ 0.73
CRAT-208ENST00000464290 TRIM37O94972 964 aa19.58■□□□□ 0.72
CRAT-208ENST00000464290 CCDC30Q5VVM6 783 aa19.58■□□□□ 0.72
CRAT-208ENST00000464290 VSIG10Q8N0Z9 540 aa19.58■□□□□ 0.72
CRAT-208ENST00000464290 PALLDQ8WX93 1383 aa19.57■□□□□ 0.72
CRAT-208ENST00000464290 BRPF1P55201 1214 aaPredicted RBP19.57■□□□□ 0.72
CRAT-208ENST00000464290 RRP1P56182 461 aaKnown RBP19.57■□□□□ 0.72
CRAT-208ENST00000464290 PLIN1O60240 522 aa19.56■□□□□ 0.72
CRAT-208ENST00000464290 DNAJC10Q8IXB1 793 aa19.56■□□□□ 0.72
CRAT-208ENST00000464290 LOC102724428A0A0B4J2F2 783 aa19.55■□□□□ 0.72
CRAT-208ENST00000464290 SLC4A2P04920 1241 aa19.55■□□□□ 0.72
CRAT-208ENST00000464290 SIK1P57059 783 aa19.55■□□□□ 0.72
CRAT-208ENST00000464290 STK31Q9BXU1 1019 aa19.54■□□□□ 0.72
CRAT-208ENST00000464290 TEX13AQ9BXU3 409 aaPredicted RBP19.54■□□□□ 0.72
CRAT-208ENST00000464290 CHMP4AQ9BY43 222 aa19.54■□□□□ 0.72
CRAT-208ENST00000464290 CHPF2Q9P2E5 772 aa19.54■□□□□ 0.72
CRAT-208ENST00000464290 NOB1Q9ULX3 412 aaKnown RBP19.54■□□□□ 0.72
CRAT-208ENST00000464290 PDIA6Q15084 440 aa19.53■□□□□ 0.72
CRAT-208ENST00000464290 PROSER3Q2NL68 480 aa19.53■□□□□ 0.72
CRAT-208ENST00000464290 G2E3Q7L622 706 aa19.53■□□□□ 0.72
CRAT-208ENST00000464290 ANXA1P04083 346 aa19.52■□□□□ 0.72
CRAT-208ENST00000464290 ATP6V1AP38606 617 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms