RNA–Protein interactions for RNA: ENST00000464273.1

PPP1CB-209, Transcript of protein phosphatase 1 catalytic subunit beta, humanhuman

TSL 2

Gene PPP1CB, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CB-209ENST00000464273 TMOD3Q9NYL9 352 aa18.4■□□□□ 0.54
PPP1CB-209ENST00000464273 FANCIQ9NVI1 1328 aa18.4■□□□□ 0.54
PPP1CB-209ENST00000464273 KDM6AO15550 1401 aaPredicted RBP18.4■□□□□ 0.54
PPP1CB-209ENST00000464273 PRIM1P49642 420 aaKnown RBP18.39■□□□□ 0.53
PPP1CB-209ENST00000464273 ACSBG1Q96GR2 724 aa18.39■□□□□ 0.53
PPP1CB-209ENST00000464273 FAM182BQ5T319 152 aa18.38■□□□□ 0.53
PPP1CB-209ENST00000464273 KAT6BQ8WYB5 2073 aa18.38■□□□□ 0.53
PPP1CB-209ENST00000464273 WNK3Q9BYP7 1800 aa18.37■□□□□ 0.53
PPP1CB-209ENST00000464273 EXOSC9Q06265 439 aaKnown RBP18.37■□□□□ 0.53
PPP1CB-209ENST00000464273 SLC39A6Q13433 755 aa18.36■□□□□ 0.53
PPP1CB-209ENST00000464273 TTC5Q8N0Z6 440 aa18.36■□□□□ 0.53
PPP1CB-209ENST00000464273 LRRC37A3O60309 1634 aa18.35■□□□□ 0.53
PPP1CB-209ENST00000464273 ELL2O00472 640 aaPredicted RBP18.35■□□□□ 0.53
PPP1CB-209ENST00000464273 PIGBQ92521 554 aa18.35■□□□□ 0.53
PPP1CB-209ENST00000464273 KCNQ3O43525 872 aa18.34■□□□□ 0.53
PPP1CB-209ENST00000464273 ZNF790Q6PG37 636 aa18.34■□□□□ 0.53
PPP1CB-209ENST00000464273 FAM196AQ6ZSG2 479 aa18.34■□□□□ 0.53
PPP1CB-209ENST00000464273 SHANK3Q9BYB0 1731 aa18.34■□□□□ 0.53
PPP1CB-209ENST00000464273 THSD7AQ9UPZ6 1657 aa18.34■□□□□ 0.53
PPP1CB-209ENST00000464273 SCN11AQ9UI33 1791 aa18.32■□□□□ 0.52
PPP1CB-209ENST00000464273 KCNQ2O43526 872 aa18.32■□□□□ 0.52
PPP1CB-209ENST00000464273 C8orf58Q8NAV2 365 aa18.32■□□□□ 0.52
PPP1CB-209ENST00000464273 EIF4A1P60842 406 aaKnown RBP18.31■□□□□ 0.52
PPP1CB-209ENST00000464273 KRT24Q2M2I5 525 aa18.31■□□□□ 0.52
PPP1CB-209ENST00000464273 TWISTNBQ3B726 338 aaPredicted RBP18.31■□□□□ 0.52
PPP1CB-209ENST00000464273 TSPYL6Q8N831 410 aa18.3■□□□□ 0.52
PPP1CB-209ENST00000464273 ATG3Q9NT62 314 aa18.3■□□□□ 0.52
PPP1CB-209ENST00000464273 RCAN3Q9UKA8 241 aa18.3■□□□□ 0.52
PPP1CB-209ENST00000464273 ASAP1Q9ULH1 1129 aa18.3■□□□□ 0.52
PPP1CB-209ENST00000464273 PTCD1O75127 700 aaKnown RBP18.29■□□□□ 0.52
PPP1CB-209ENST00000464273 CT47B1P0C2W7 299 aaPredicted RBP18.29■□□□□ 0.52
PPP1CB-209ENST00000464273 FMNL2Q96PY5 1086 aa18.29■□□□□ 0.52
PPP1CB-209ENST00000464273 ADAMTS7Q9UKP4 1686 aa18.28■□□□□ 0.52
PPP1CB-209ENST00000464273 VAMP4O75379 141 aa18.28■□□□□ 0.52
PPP1CB-209ENST00000464273 ZNF496Q96IT1 587 aaPredicted RBP18.28■□□□□ 0.52
PPP1CB-209ENST00000464273 RBM42Q9BTD8 480 aaKnown RBP18.28■□□□□ 0.52
PPP1CB-209ENST00000464273 BCL9O00512 1426 aa18.27■□□□□ 0.52
PPP1CB-209ENST00000464273 SMARCC1Q92922 1105 aaPredicted RBP18.27■□□□□ 0.52
PPP1CB-209ENST00000464273 CHMP4AQ9BY43 222 aa18.27■□□□□ 0.52
PPP1CB-209ENST00000464273 VIRMAQ69YN4 1812 aaKnown RBP18.27■□□□□ 0.52
PPP1CB-209ENST00000464273 MRC1P22897 1456 aa18.26■□□□□ 0.51
PPP1CB-209ENST00000464273 RGS12O14924 1447 aa18.26■□□□□ 0.51
PPP1CB-209ENST00000464273 GIGYF1O75420 1035 aaPredicted RBP18.26■□□□□ 0.51
PPP1CB-209ENST00000464273 EIF2S2P20042 333 aaKnown RBP18.26■□□□□ 0.51
PPP1CB-209ENST00000464273 BCL11BQ9C0K0 894 aaPredicted RBP18.26■□□□□ 0.51
PPP1CB-209ENST00000464273 TRIM37O94972 964 aa18.25■□□□□ 0.51
PPP1CB-209ENST00000464273 SNRPA1P09661 255 aaKnown RBP18.25■□□□□ 0.51
PPP1CB-209ENST00000464273 PTF1AQ7RTS3 328 aa18.25■□□□□ 0.51
PPP1CB-209ENST00000464273 ZNF428Q96B54 188 aa18.25■□□□□ 0.51
PPP1CB-209ENST00000464273 SOS1Q07889 1333 aaPredicted RBP18.24■□□□□ 0.51
PPP1CB-209ENST00000464273 NECTIN2Q92692 538 aa18.24■□□□□ 0.51
PPP1CB-209ENST00000464273 BRWD3Q6RI45 1802 aa18.23■□□□□ 0.51
PPP1CB-209ENST00000464273 TCERG1O14776 1098 aaKnown RBP18.23■□□□□ 0.51
PPP1CB-209ENST00000464273 RARSP54136 660 aaKnown RBP18.23■□□□□ 0.51
PPP1CB-209ENST00000464273 CCDC30Q5VVM6 783 aa18.23■□□□□ 0.51
PPP1CB-209ENST00000464273 SUPT16HQ9Y5B9 1047 aaKnown RBP18.23■□□□□ 0.51
PPP1CB-209ENST00000464273 TOGARAM1Q9Y4F4 1720 aa18.23■□□□□ 0.51
PPP1CB-209ENST00000464273 SIPA1L3O60292 1781 aaPredicted RBP18.22■□□□□ 0.51
PPP1CB-209ENST00000464273 ITGB4P16144 1822 aa18.22■□□□□ 0.51
PPP1CB-209ENST00000464273 HOXB7P09629 217 aa18.22■□□□□ 0.51
PPP1CB-209ENST00000464273 HDGFL1Q5TGJ6 251 aa18.22■□□□□ 0.51
PPP1CB-209ENST00000464273 SMC4Q9NTJ3 1288 aa18.22■□□□□ 0.51
PPP1CB-209ENST00000464273 DOT1LQ8TEK3 1739 aa18.21■□□□□ 0.51
PPP1CB-209ENST00000464273 PRAMEF22A3QJZ6 481 aa18.21■□□□□ 0.51
PPP1CB-209ENST00000464273 BCAR3O75815 825 aa18.21■□□□□ 0.51
PPP1CB-209ENST00000464273 ALDH1L2Q3SY69 923 aa18.21■□□□□ 0.51
PPP1CB-209ENST00000464273 SSH1Q8WYL5 1049 aa18.21■□□□□ 0.51
PPP1CB-209ENST00000464273 BCL2L13Q9BXK5 485 aa18.21■□□□□ 0.51
PPP1CB-209ENST00000464273 STK31Q9BXU1 1019 aa18.21■□□□□ 0.51
PPP1CB-209ENST00000464273 TEX13AQ9BXU3 409 aaPredicted RBP18.21■□□□□ 0.51
PPP1CB-209ENST00000464273 HEG1Q9ULI3 1381 aa18.2■□□□□ 0.5
PPP1CB-209ENST00000464273 VSIG10Q8N0Z9 540 aa18.2■□□□□ 0.5
PPP1CB-209ENST00000464273 USP16Q9Y5T5 823 aa18.2■□□□□ 0.5
PPP1CB-209ENST00000464273 LOC102724428A0A0B4J2F2 783 aa18.19■□□□□ 0.5
PPP1CB-209ENST00000464273 SLC4A2P04920 1241 aa18.19■□□□□ 0.5
PPP1CB-209ENST00000464273 ATP6V1AP38606 617 aa18.19■□□□□ 0.5
PPP1CB-209ENST00000464273 SIK1P57059 783 aa18.19■□□□□ 0.5
PPP1CB-209ENST00000464273 KDM3BQ7LBC6 1761 aa18.19■□□□□ 0.5
PPP1CB-209ENST00000464273 PALLDQ8WX93 1383 aa18.18■□□□□ 0.5
PPP1CB-209ENST00000464273 STARD3NLO95772 234 aa18.18■□□□□ 0.5
PPP1CB-209ENST00000464273 CANXP27824 592 aaKnown RBP18.18■□□□□ 0.5
PPP1CB-209ENST00000464273 DNAJC10Q8IXB1 793 aa18.18■□□□□ 0.5
PPP1CB-209ENST00000464273 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.18■□□□□ 0.5
PPP1CB-209ENST00000464273 APBA3O96018 575 aa18.17■□□□□ 0.5
PPP1CB-209ENST00000464273 MRPL50Q8N5N7 158 aaKnown RBP18.17■□□□□ 0.5
PPP1CB-209ENST00000464273 FRAT1Q92837 279 aaPredicted RBP18.17■□□□□ 0.5
PPP1CB-209ENST00000464273 SLC4A9Q96Q91 983 aa18.16■□□□□ 0.5
PPP1CB-209ENST00000464273 IPO8O15397 1037 aaKnown RBP18.15■□□□□ 0.5
PPP1CB-209ENST00000464273 CHPF2Q9P2E5 772 aa18.15■□□□□ 0.5
PPP1CB-209ENST00000464273 DBF4Q9UBU7 674 aaPredicted RBP18.15■□□□□ 0.5
PPP1CB-209ENST00000464273 CCNL1Q9UK58 526 aaPredicted RBP18.15■□□□□ 0.5
PPP1CB-209ENST00000464273 PLIN1O60240 522 aa18.14■□□□□ 0.49
PPP1CB-209ENST00000464273 SF3B2Q13435 895 aaKnown RBP18.14■□□□□ 0.49
PPP1CB-209ENST00000464273 NOB1Q9ULX3 412 aaKnown RBP18.14■□□□□ 0.49
PPP1CB-209ENST00000464273 KCPQ6ZWJ8 1503 aa18.13■□□□□ 0.49
PPP1CB-209ENST00000464273 NHSQ6T4R5 1651 aa18.13■□□□□ 0.49
PPP1CB-209ENST00000464273 A1BGP04217 495 aa18.13■□□□□ 0.49
PPP1CB-209ENST00000464273 MYL6BP14649 208 aa18.13■□□□□ 0.49
PPP1CB-209ENST00000464273 HYPKQ9NX55 129 aa18.13■□□□□ 0.49
PPP1CB-209ENST00000464273 SBF2Q86WG5 1849 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms