RNA–Protein interactions for RNA: ENST00000463688.6

COMMD3-205, Transcript of COMM domain containing 3, humanhuman

TSL 5

Gene COMMD3, Length 1,407 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-205ENST00000463688 FCHSD2O94868 740 aa17.94■□□□□ 0.46
COMMD3-205ENST00000463688 KCNQ4P56696 695 aa17.94■□□□□ 0.46
COMMD3-205ENST00000463688 NFATC2IPQ8NCF5 419 aa17.94■□□□□ 0.46
COMMD3-205ENST00000463688 SGIP1Q9BQI5 828 aa17.94■□□□□ 0.46
COMMD3-205ENST00000463688 RBM42Q9BTD8 480 aaKnown RBP17.94■□□□□ 0.46
COMMD3-205ENST00000463688 PDGFDQ9GZP0 370 aaPredicted RBP17.94■□□□□ 0.46
COMMD3-205ENST00000463688 PPP2R1AP30153 589 aa17.93■□□□□ 0.46
COMMD3-205ENST00000463688 RALBP1Q15311 655 aa17.93■□□□□ 0.46
COMMD3-205ENST00000463688 COL23A1Q86Y22 540 aaPredicted RBP17.93■□□□□ 0.46
COMMD3-205ENST00000463688 SLC52A2Q9HAB3 445 aa17.93■□□□□ 0.46
COMMD3-205ENST00000463688 CASZ1Q86V15 1759 aa17.92■□□□□ 0.46
COMMD3-205ENST00000463688 LY75O60449 1722 aa17.92■□□□□ 0.46
COMMD3-205ENST00000463688 GNAT3A8MTJ3 354 aa17.92■□□□□ 0.46
COMMD3-205ENST00000463688 TRAPPC3LQ5T215 181 aa17.92■□□□□ 0.46
COMMD3-205ENST00000463688 SYT17Q9BSW7 474 aa17.92■□□□□ 0.46
COMMD3-205ENST00000463688 FHDC1Q9C0D6 1143 aaPredicted RBP17.92■□□□□ 0.46
COMMD3-205ENST00000463688 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.91■□□□□ 0.46
COMMD3-205ENST00000463688 U2AF1L5P0DN76 240 aaPredicted RBP17.91■□□□□ 0.46
COMMD3-205ENST00000463688 U2AF1Q01081 240 aaKnown RBP eCLIP17.91■□□□□ 0.46
COMMD3-205ENST00000463688 TEFQ10587 303 aa17.91■□□□□ 0.46
COMMD3-205ENST00000463688 CNTNAP4Q9C0A0 1308 aa17.91■□□□□ 0.46
COMMD3-205ENST00000463688 GNPATO15228 680 aa17.9■□□□□ 0.46
COMMD3-205ENST00000463688 RNMTO43148 476 aaKnown RBP17.9■□□□□ 0.46
COMMD3-205ENST00000463688 MTHFSDQ2M296 383 aaKnown RBP17.9■□□□□ 0.46
COMMD3-205ENST00000463688 TTC5Q8N0Z6 440 aa17.9■□□□□ 0.46
COMMD3-205ENST00000463688 RTF1Q92541 710 aaKnown RBP17.9■□□□□ 0.46
COMMD3-205ENST00000463688 TEX13AQ9BXU3 409 aaPredicted RBP17.9■□□□□ 0.46
COMMD3-205ENST00000463688 VSIG10Q8N0Z9 540 aa17.89■□□□□ 0.46
COMMD3-205ENST00000463688 NLGN1Q8N2Q7 840 aa17.89■□□□□ 0.46
COMMD3-205ENST00000463688 HTATSF1O43719 755 aaKnown RBP17.89■□□□□ 0.45
COMMD3-205ENST00000463688 CD2APQ9Y5K6 639 aa17.89■□□□□ 0.45
COMMD3-205ENST00000463688 KDM6AO15550 1401 aaPredicted RBP17.88■□□□□ 0.45
COMMD3-205ENST00000463688 QSER1Q2KHR3 1735 aa17.88■□□□□ 0.45
COMMD3-205ENST00000463688 PTCD1O75127 700 aaKnown RBP17.88■□□□□ 0.45
COMMD3-205ENST00000463688 RFC4P35249 363 aa17.88■□□□□ 0.45
COMMD3-205ENST00000463688 LINC00116Q8NCU8 138 aa17.88■□□□□ 0.45
COMMD3-205ENST00000463688 RPS6KA4O75676 772 aa17.87■□□□□ 0.45
COMMD3-205ENST00000463688 STARD3NLO95772 234 aa17.87■□□□□ 0.45
COMMD3-205ENST00000463688 PHF14O94880 888 aa17.86■□□□□ 0.45
COMMD3-205ENST00000463688 PRKAR2BP31323 418 aa17.86■□□□□ 0.45
COMMD3-205ENST00000463688 ITPK1Q13572 414 aa17.86■□□□□ 0.45
COMMD3-205ENST00000463688 NPM2Q86SE8 214 aaKnown RBP17.86■□□□□ 0.45
COMMD3-205ENST00000463688 GRIN3BO60391 1043 aa17.85■□□□□ 0.45
COMMD3-205ENST00000463688 KLHL34Q8N239 644 aa17.85■□□□□ 0.45
COMMD3-205ENST00000463688 RSPH6AQ9H0K4 717 aa17.84■□□□□ 0.45
COMMD3-205ENST00000463688 ITGB4P16144 1822 aa17.84■□□□□ 0.45
COMMD3-205ENST00000463688 COL3A1P02461 1466 aaPredicted RBP17.84■□□□□ 0.45
COMMD3-205ENST00000463688 GPR162Q16538 588 aa17.83■□□□□ 0.45
COMMD3-205ENST00000463688 LGR6Q9HBX8 967 aa17.83■□□□□ 0.45
COMMD3-205ENST00000463688 TOGARAM1Q9Y4F4 1720 aa17.83■□□□□ 0.44
COMMD3-205ENST00000463688 C5P01031 1676 aa17.82■□□□□ 0.44
COMMD3-205ENST00000463688 C4BP0C0L5 1744 aa17.82■□□□□ 0.44
COMMD3-205ENST00000463688 A0A087WZG4 1122 aa17.81■□□□□ 0.44
COMMD3-205ENST00000463688 ZNF831Q5JPB2 1677 aa17.81■□□□□ 0.44
COMMD3-205ENST00000463688 ZPR1O75312 459 aa17.81■□□□□ 0.44
COMMD3-205ENST00000463688 YY1P25490 414 aa17.81■□□□□ 0.44
COMMD3-205ENST00000463688 CRKLP46109 303 aaKnown RBP17.81■□□□□ 0.44
COMMD3-205ENST00000463688 PNISRQ8TF01 805 aaKnown RBP17.81■□□□□ 0.44
COMMD3-205ENST00000463688 MAPK8IP3Q9UPT6 1336 aa17.8■□□□□ 0.44
COMMD3-205ENST00000463688 MRC1P22897 1456 aa17.8■□□□□ 0.44
COMMD3-205ENST00000463688 MSL1Q68DK7 614 aa17.8■□□□□ 0.44
COMMD3-205ENST00000463688 ZNF790Q6PG37 636 aa17.8■□□□□ 0.44
COMMD3-205ENST00000463688 ARHGEF1Q92888 912 aaKnown RBP17.8■□□□□ 0.44
COMMD3-205ENST00000463688 FMNL2Q96PY5 1086 aa17.8■□□□□ 0.44
COMMD3-205ENST00000463688 CCDC87Q9NVE4 849 aa17.8■□□□□ 0.44
COMMD3-205ENST00000463688 DDX10Q13206 875 aaKnown RBP17.79■□□□□ 0.44
COMMD3-205ENST00000463688 PARP3Q9Y6F1 533 aa17.79■□□□□ 0.44
COMMD3-205ENST00000463688 BTBD11A6QL63 1104 aa17.78■□□□□ 0.44
COMMD3-205ENST00000463688 IL17REQ8NFR9 667 aa17.78■□□□□ 0.44
COMMD3-205ENST00000463688 SLC4A9Q96Q91 983 aa17.78■□□□□ 0.44
COMMD3-205ENST00000463688 MYBBP1AQ9BQG0 1328 aaKnown RBP17.77■□□□□ 0.44
COMMD3-205ENST00000463688 TGFB2P61812 414 aa17.77■□□□□ 0.44
COMMD3-205ENST00000463688 LMOD3Q0VAK6 560 aa17.77■□□□□ 0.44
COMMD3-205ENST00000463688 CEMIPQ8WUJ3 1361 aa17.76■□□□□ 0.43
COMMD3-205ENST00000463688 MMP10P09238 476 aa17.76■□□□□ 0.43
COMMD3-205ENST00000463688 CYP19A1P11511 503 aaPredicted RBP17.76■□□□□ 0.43
COMMD3-205ENST00000463688 PHACTR3Q96KR7 559 aa17.76■□□□□ 0.43
COMMD3-205ENST00000463688 SLC39A6Q13433 755 aa17.75■□□□□ 0.43
COMMD3-205ENST00000463688 DNAJC10Q8IXB1 793 aa17.75■□□□□ 0.43
COMMD3-205ENST00000463688 TAF7Q15545 349 aaPredicted RBP17.74■□□□□ 0.43
COMMD3-205ENST00000463688 TAF1LQ8IZX4 1826 aa17.74■□□□□ 0.43
COMMD3-205ENST00000463688 GYS1P13807 737 aa17.73■□□□□ 0.43
COMMD3-205ENST00000463688 WDR43Q15061 677 aaKnown RBP eCLIP17.73■□□□□ 0.43
COMMD3-205ENST00000463688 INTS5Q6P9B9 1019 aaKnown RBP17.73■□□□□ 0.43
COMMD3-205ENST00000463688 PELP1Q8IZL8 1130 aaKnown RBP17.73■□□□□ 0.43
COMMD3-205ENST00000463688 USP42Q9H9J4 1324 aaKnown RBP17.73■□□□□ 0.43
COMMD3-205ENST00000463688 SCN11AQ9UI33 1791 aa17.73■□□□□ 0.43
COMMD3-205ENST00000463688 SNRPA1P09661 255 aaKnown RBP17.72■□□□□ 0.43
COMMD3-205ENST00000463688 NFE2L2Q16236 605 aa17.72■□□□□ 0.43
COMMD3-205ENST00000463688 HEG1Q9ULI3 1381 aa17.72■□□□□ 0.43
COMMD3-205ENST00000463688 SOS1Q07889 1333 aaPredicted RBP17.72■□□□□ 0.43
COMMD3-205ENST00000463688 ZNF496Q96IT1 587 aaPredicted RBP17.72■□□□□ 0.43
COMMD3-205ENST00000463688 NARFQ9UHQ1 456 aa17.72■□□□□ 0.43
COMMD3-205ENST00000463688 COL24A1Q17RW2 1714 aa17.71■□□□□ 0.43
COMMD3-205ENST00000463688 IL6STP40189 918 aaPredicted RBP17.71■□□□□ 0.43
COMMD3-205ENST00000463688 BABAM1Q9NWV8 329 aa17.71■□□□□ 0.43
COMMD3-205ENST00000463688 AMIGO3Q86WK7 504 aa17.7■□□□□ 0.42
COMMD3-205ENST00000463688 PDZRN3Q9UPQ7 1066 aa17.7■□□□□ 0.42
COMMD3-205ENST00000463688 RGL2O15211 777 aa17.69■□□□□ 0.42
COMMD3-205ENST00000463688 UBR3Q6ZT12 1888 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms