RNA–Protein interactions for RNA: ENST00000463372.5

C9orf3-211, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 919 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-211ENST00000463372 TMF1P82094 1093 aa19.48■□□□□ 0.71
C9orf3-211ENST00000463372 MAP2K1Q02750 393 aaPredicted RBP19.47■□□□□ 0.71
C9orf3-211ENST00000463372 PARP3Q9Y6F1 533 aa19.47■□□□□ 0.71
C9orf3-211ENST00000463372 RGPD2P0DJD1 1756 aa19.47■□□□□ 0.71
C9orf3-211ENST00000463372 LMNB1P20700 586 aa19.46■□□□□ 0.71
C9orf3-211ENST00000463372 KTN1Q86UP2 1357 aaKnown RBP19.45■□□□□ 0.7
C9orf3-211ENST00000463372 RASSF7Q02833 373 aa19.45■□□□□ 0.7
C9orf3-211ENST00000463372 KDM6AO15550 1401 aaPredicted RBP19.44■□□□□ 0.7
C9orf3-211ENST00000463372 DPY19L2Q6NUT2 758 aa19.44■□□□□ 0.7
C9orf3-211ENST00000463372 LINC00116Q8NCU8 138 aa19.44■□□□□ 0.7
C9orf3-211ENST00000463372 MEGF6O75095 1541 aa19.44■□□□□ 0.7
C9orf3-211ENST00000463372 USP31Q70CQ4 1352 aa19.44■□□□□ 0.7
C9orf3-211ENST00000463372 POTECB2RU33 542 aa19.43■□□□□ 0.7
C9orf3-211ENST00000463372 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.43■□□□□ 0.72e-6■□□□□ 9.3
C9orf3-211ENST00000463372 MAP2P11137 1827 aaKnown RBP19.43■□□□□ 0.7
C9orf3-211ENST00000463372 IP6K1Q92551 441 aa19.42■□□□□ 0.7
C9orf3-211ENST00000463372 MON2Q7Z3U7 1717 aa19.42■□□□□ 0.7
C9orf3-211ENST00000463372 TMEM88BA6NKF7 163 aa19.41■□□□□ 0.7
C9orf3-211ENST00000463372 TRAPPC3LQ5T215 181 aa19.41■□□□□ 0.7
C9orf3-211ENST00000463372 EVC2Q86UK5 1308 aa19.41■□□□□ 0.7
C9orf3-211ENST00000463372 PRPF38BQ5VTL8 546 aaKnown RBP19.4■□□□□ 0.7
C9orf3-211ENST00000463372 BEGAINQ9BUH8 593 aa19.4■□□□□ 0.7
C9orf3-211ENST00000463372 LOC102724428A0A0B4J2F2 783 aa19.39■□□□□ 0.69
C9orf3-211ENST00000463372 SIK1P57059 783 aa19.39■□□□□ 0.69
C9orf3-211ENST00000463372 CGNL1Q0VF96 1302 aa19.39■□□□□ 0.69
C9orf3-211ENST00000463372 PASKQ96RG2 1323 aa19.38■□□□□ 0.69
C9orf3-211ENST00000463372 CHRNA5P30532 468 aa19.37■□□□□ 0.69
C9orf3-211ENST00000463372 NME9Q86XW9 330 aa19.37■□□□□ 0.69
C9orf3-211ENST00000463372 RTCBQ9Y3I0 505 aaKnown RBP19.37■□□□□ 0.69
C9orf3-211ENST00000463372 PCDH11XQ9BZA7 1347 aa19.36■□□□□ 0.69
C9orf3-211ENST00000463372 PCDH11YQ9BZA8 1340 aa19.36■□□□□ 0.69
C9orf3-211ENST00000463372 DEFB115Q30KQ5 88 aa19.36■□□□□ 0.69
C9orf3-211ENST00000463372 RAPGEF4Q8WZA2 1011 aa19.36■□□□□ 0.69
C9orf3-211ENST00000463372 DICER1Q9UPY3 1922 aaKnown RBP19.35■□□□□ 0.69
C9orf3-211ENST00000463372 WDR33Q9C0J8 1336 aaKnown RBP19.35■□□□□ 0.69
C9orf3-211ENST00000463372 POTEIP0CG38 1075 aa19.35■□□□□ 0.69
C9orf3-211ENST00000463372 POTEJP0CG39 1038 aa19.35■□□□□ 0.69
C9orf3-211ENST00000463372 ATP6V1AP38606 617 aa19.35■□□□□ 0.69
C9orf3-211ENST00000463372 NBPF1Q3BBV0 1214 aa19.35■□□□□ 0.69
C9orf3-211ENST00000463372 MCOLN1Q9GZU1 580 aa19.35■□□□□ 0.69
C9orf3-211ENST00000463372 CASP8AP2Q9UKL3 1982 aa19.35■□□□□ 0.69
C9orf3-211ENST00000463372 GYS1P13807 737 aa19.34■□□□□ 0.69
C9orf3-211ENST00000463372 RASSF10A6NK89 507 aa19.33■□□□□ 0.68
C9orf3-211ENST00000463372 RFC4P35249 363 aa19.33■□□□□ 0.68
C9orf3-211ENST00000463372 ITPK1Q13572 414 aa19.33■□□□□ 0.68
C9orf3-211ENST00000463372 PIGBQ92521 554 aa19.33■□□□□ 0.68
C9orf3-211ENST00000463372 ARHGEF1Q92888 912 aaKnown RBP19.32■□□□□ 0.68
C9orf3-211ENST00000463372 TATP17735 454 aaPredicted RBP19.31■□□□□ 0.68
C9orf3-211ENST00000463372 ADRA2BP18089 450 aa19.31■□□□□ 0.68
C9orf3-211ENST00000463372 LDHDQ86WU2 507 aa19.31■□□□□ 0.68
C9orf3-211ENST00000463372 CD163L1Q9NR16 1453 aa19.28■□□□□ 0.68
C9orf3-211ENST00000463372 AMPHP49418 695 aa19.28■□□□□ 0.68
C9orf3-211ENST00000463372 SCN4AP35499 1836 aa19.28■□□□□ 0.68
C9orf3-211ENST00000463372 HOXC9P31274 260 aa19.27■□□□□ 0.68
C9orf3-211ENST00000463372 USHBP1Q8N6Y0 703 aa19.27■□□□□ 0.68
C9orf3-211ENST00000463372 ABT1Q9ULW3 272 aaKnown RBP19.27■□□□□ 0.68
C9orf3-211ENST00000463372 ITGBL1O95965 494 aaPredicted RBP19.26■□□□□ 0.67
C9orf3-211ENST00000463372 DGKZQ13574 1117 aa19.26■□□□□ 0.67
C9orf3-211ENST00000463372 ERFEQ4G0M1 354 aa19.26■□□□□ 0.67
C9orf3-211ENST00000463372 NBPF6Q5VWK0 638 aa19.26■□□□□ 0.67
C9orf3-211ENST00000463372 NBPF4Q96M43 638 aa19.26■□□□□ 0.67
C9orf3-211ENST00000463372 SBNO2Q9Y2G9 1366 aa19.25■□□□□ 0.67
C9orf3-211ENST00000463372 IQCA1LA6NCM1 817 aa19.25■□□□□ 0.67
C9orf3-211ENST00000463372 TSKSQ9UJT2 592 aa19.25■□□□□ 0.67
C9orf3-211ENST00000463372 THSD7BQ9C0I4 1608 aa19.25■□□□□ 0.67
C9orf3-211ENST00000463372 DLEC1Q9Y238 1755 aa19.24■□□□□ 0.67
C9orf3-211ENST00000463372 CYP27B1O15528 508 aa19.24■□□□□ 0.67
C9orf3-211ENST00000463372 GCC1Q96CN9 775 aa19.24■□□□□ 0.67
C9orf3-211ENST00000463372 TMOD3Q9NYL9 352 aa19.24■□□□□ 0.67
C9orf3-211ENST00000463372 ZNF219Q9P2Y4 722 aaPredicted RBP19.24■□□□□ 0.67
C9orf3-211ENST00000463372 ASAP1Q9ULH1 1129 aa19.24■□□□□ 0.67
C9orf3-211ENST00000463372 NFKBIEO00221 500 aa19.23■□□□□ 0.67
C9orf3-211ENST00000463372 PAXIP1Q6ZW49 1069 aaPredicted RBP19.23■□□□□ 0.67
C9orf3-211ENST00000463372 DDNO94850 711 aaPredicted RBP19.22■□□□□ 0.67
C9orf3-211ENST00000463372 ECE1P42892 770 aa19.22■□□□□ 0.67
C9orf3-211ENST00000463372 SOX10P56693 466 aa19.22■□□□□ 0.67
C9orf3-211ENST00000463372 DDR1Q08345 913 aa19.22■□□□□ 0.67
C9orf3-211ENST00000463372 TTLL6Q8N841 843 aa19.22■□□□□ 0.67
C9orf3-211ENST00000463372 MAP3K19Q56UN5 1328 aa19.22■□□□□ 0.67
C9orf3-211ENST00000463372 RPS6KA4O75676 772 aa19.21■□□□□ 0.67
C9orf3-211ENST00000463372 RC3H1Q5TC82 1133 aaKnown RBP19.21■□□□□ 0.67
C9orf3-211ENST00000463372 CLEC11AQ9Y240 323 aa19.21■□□□□ 0.67
C9orf3-211ENST00000463372 COL5A3P25940 1745 aaPredicted RBP19.2■□□□□ 0.66
C9orf3-211ENST00000463372 SMG6Q86US8 1419 aaKnown RBP19.2■□□□□ 0.66
C9orf3-211ENST00000463372 GRM1Q13255 1194 aa19.2■□□□□ 0.66
C9orf3-211ENST00000463372 EAPPQ56P03 285 aaPredicted RBP19.2■□□□□ 0.66
C9orf3-211ENST00000463372 CAPNS2Q96L46 248 aa19.2■□□□□ 0.66
C9orf3-211ENST00000463372 GPR101Q96P66 508 aaPredicted RBP19.2■□□□□ 0.66
C9orf3-211ENST00000463372 MYH14Q7Z406 1995 aaKnown RBP19.2■□□□□ 0.66
C9orf3-211ENST00000463372 HDGFL2Q7Z4V5 671 aaPredicted RBP19.19■□□□□ 0.66
C9orf3-211ENST00000463372 TAF1DQ9H5J8 278 aaPredicted RBP19.19■□□□□ 0.66
C9orf3-211ENST00000463372 LTBP1Q14766 1721 aa19.19■□□□□ 0.66
C9orf3-211ENST00000463372 EDC4Q6P2E9 1401 aaKnown RBP19.18■□□□□ 0.66
C9orf3-211ENST00000463372 FER1L6Q2WGJ9 1857 aa19.18■□□□□ 0.66
C9orf3-211ENST00000463372 CA12O43570 354 aa19.18■□□□□ 0.66
C9orf3-211ENST00000463372 FKBP8Q14318 412 aa19.18■□□□□ 0.66
C9orf3-211ENST00000463372 AFDNP55196 1824 aaKnown RBP19.18■□□□□ 0.66
C9orf3-211ENST00000463372 ZNF831Q5JPB2 1677 aa19.17■□□□□ 0.66
C9orf3-211ENST00000463372 CNTNAP4Q9C0A0 1308 aa19.17■□□□□ 0.66
C9orf3-211ENST00000463372 POLRMTO00411 1230 aaKnown RBP19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms