RNA–Protein interactions for RNA: ENST00000463216.5

TTC3-212, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 842 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-212ENST00000463216 HSP90AB1P08238 724 aaKnown RBP32.84■■■□□ 2.85
TTC3-212ENST00000463216 AEBP1Q8IUX7 1158 aa32.84■■■□□ 2.85
TTC3-212ENST00000463216 RBM42Q9BTD8 480 aaKnown RBP32.84■■■□□ 2.85
TTC3-212ENST00000463216 DCAF5Q96JK2 942 aa32.83■■■□□ 2.85
TTC3-212ENST00000463216 SSFA2P28290 1259 aa32.82■■■□□ 2.84
TTC3-212ENST00000463216 ERVV-2B6SEH9 535 aa32.81■■■□□ 2.84
TTC3-212ENST00000463216 YBX3P16989 372 aaKnown RBP eCLIP32.81■■■□□ 2.844e-14■□□□□ 9.1
TTC3-212ENST00000463216 AMOTQ4VCS5 1084 aa32.81■■■□□ 2.84
TTC3-212ENST00000463216 SULT6B1Q6IMI4 303 aa32.81■■■□□ 2.84
TTC3-212ENST00000463216 C1orf141Q5JVX7 400 aa32.8■■■□□ 2.84
TTC3-212ENST00000463216 PLEKHG2Q9H7P9 1386 aa32.8■■■□□ 2.84
TTC3-212ENST00000463216 KIF7Q2M1P5 1343 aa32.79■■■□□ 2.84
TTC3-212ENST00000463216 CABP4P57796 275 aa32.79■■■□□ 2.84
TTC3-212ENST00000463216 CD2APQ9Y5K6 639 aa32.79■■■□□ 2.84
TTC3-212ENST00000463216 GRIN3BO60391 1043 aa32.77■■■□□ 2.84
TTC3-212ENST00000463216 MTHFSP49914 203 aa32.77■■■□□ 2.84
TTC3-212ENST00000463216 AMER1Q5JTC6 1135 aaPredicted RBP32.75■■■□□ 2.83
TTC3-212ENST00000463216 WWC3Q9ULE0 1092 aa32.75■■■□□ 2.83
TTC3-212ENST00000463216 KDM6AO15550 1401 aaPredicted RBP32.75■■■□□ 2.83
TTC3-212ENST00000463216 IL13P35225 146 aa32.74■■■□□ 2.83
TTC3-212ENST00000463216 SLC4A9Q96Q91 983 aa32.72■■■□□ 2.83
TTC3-212ENST00000463216 RTCBQ9Y3I0 505 aaKnown RBP32.72■■■□□ 2.83
TTC3-212ENST00000463216 CNGB1Q14028 1251 aaPredicted RBP32.71■■■□□ 2.83
TTC3-212ENST00000463216 KDRP35968 1356 aa32.7■■■□□ 2.83
TTC3-212ENST00000463216 CC2D1BQ5T0F9 858 aaKnown RBP32.7■■■□□ 2.83
TTC3-212ENST00000463216 TRAPPC3LQ5T215 181 aa32.7■■■□□ 2.83
TTC3-212ENST00000463216 PTCD1O75127 700 aaKnown RBP32.69■■■□□ 2.82
TTC3-212ENST00000463216 NFATC2IPQ8NCF5 419 aa32.69■■■□□ 2.82
TTC3-212ENST00000463216 MMP10P09238 476 aa32.66■■■□□ 2.82
TTC3-212ENST00000463216 HMOX1P09601 288 aa32.66■■■□□ 2.82
TTC3-212ENST00000463216 ARHGEF1Q92888 912 aaKnown RBP32.63■■■□□ 2.81
TTC3-212ENST00000463216 COL5A3P25940 1745 aaPredicted RBP32.63■■■□□ 2.81
TTC3-212ENST00000463216 ZNF831Q5JPB2 1677 aa32.62■■■□□ 2.81
TTC3-212ENST00000463216 CNTNAP4Q9C0A0 1308 aa32.62■■■□□ 2.81
TTC3-212ENST00000463216 RFC4P35249 363 aa32.62■■■□□ 2.81
TTC3-212ENST00000463216 RC3H1Q5TC82 1133 aaKnown RBP32.62■■■□□ 2.81
TTC3-212ENST00000463216 C1QTNF8P60827 252 aa32.61■■■□□ 2.81
TTC3-212ENST00000463216 AKAP4Q5JQC9 854 aa32.61■■■□□ 2.81
TTC3-212ENST00000463216 PER1O15534 1290 aaPredicted RBP32.6■■■□□ 2.81
TTC3-212ENST00000463216 GIGYF1O75420 1035 aaPredicted RBP32.6■■■□□ 2.81
TTC3-212ENST00000463216 RPS6KA4O75676 772 aa32.6■■■□□ 2.81
TTC3-212ENST00000463216 NLGN1Q8N2Q7 840 aa32.59■■■□□ 2.81
TTC3-212ENST00000463216 SCN11AQ9UI33 1791 aa32.59■■■□□ 2.81
TTC3-212ENST00000463216 DIAPH1O60610 1272 aaKnown RBP32.58■■■□□ 2.81
TTC3-212ENST00000463216 ADRA2BP18089 450 aa32.58■■■□□ 2.81
TTC3-212ENST00000463216 MYH14Q7Z406 1995 aaKnown RBP32.58■■■□□ 2.81
TTC3-212ENST00000463216 LGR6Q9HBX8 967 aa32.57■■■□□ 2.8
TTC3-212ENST00000463216 SENP3-EIF4A1A0A087X0R7 540 aa32.56■■■□□ 2.8
TTC3-212ENST00000463216 CRKLP46109 303 aaKnown RBP32.56■■■□□ 2.8
TTC3-212ENST00000463216 CICQ96RK0 1608 aaPredicted RBP32.55■■■□□ 2.8
TTC3-212ENST00000463216 GYS1P13807 737 aa32.54■■■□□ 2.8
TTC3-212ENST00000463216 SLC52A2Q9HAB3 445 aa32.54■■■□□ 2.8
TTC3-212ENST00000463216 PARP3Q9Y6F1 533 aa32.52■■■□□ 2.8
TTC3-212ENST00000463216 ATP10DQ9P241 1426 aa32.51■■■□□ 2.8
TTC3-212ENST00000463216 RNMTO43148 476 aaKnown RBP32.51■■■□□ 2.79
TTC3-212ENST00000463216 MTHFSDQ2M296 383 aaKnown RBP32.51■■■□□ 2.79
TTC3-212ENST00000463216 C4AP0C0L4 1744 aa32.51■■■□□ 2.79
TTC3-212ENST00000463216 VIRMAQ69YN4 1812 aaKnown RBP32.5■■■□□ 2.79
TTC3-212ENST00000463216 U2SURPO15042 1029 aaKnown RBP32.5■■■□□ 2.79
TTC3-212ENST00000463216 SLC39A6Q13433 755 aa32.5■■■□□ 2.79
TTC3-212ENST00000463216 CCDC87Q9NVE4 849 aa32.5■■■□□ 2.79
TTC3-212ENST00000463216 SRP68Q9UHB9 627 aaKnown RBP32.5■■■□□ 2.79
TTC3-212ENST00000463216 TJP1Q07157 1748 aa32.5■■■□□ 2.79
TTC3-212ENST00000463216 N4BP2Q86UW6 1770 aaPredicted RBP32.5■■■□□ 2.79
TTC3-212ENST00000463216 ZNF526Q8TF50 670 aaPredicted RBP32.49■■■□□ 2.79
TTC3-212ENST00000463216 A0A0G2JLW4 131 aa32.48■■■□□ 2.79
TTC3-212ENST00000463216 DNAJC10Q8IXB1 793 aa32.48■■■□□ 2.79
TTC3-212ENST00000463216 PXDNLA1KZ92 1463 aa32.47■■■□□ 2.79
TTC3-212ENST00000463216 TGFB2P61812 414 aa32.46■■■□□ 2.79
TTC3-212ENST00000463216 BCS1LQ9Y276 419 aa32.46■■■□□ 2.79
TTC3-212ENST00000463216 KIF13BQ9NQT8 1826 aa32.46■■■□□ 2.79
TTC3-212ENST00000463216 GPBP1L1Q9HC44 474 aaPredicted RBP32.45■■■□□ 2.79
TTC3-212ENST00000463216 INTS5Q6P9B9 1019 aaKnown RBP32.44■■■□□ 2.78
TTC3-212ENST00000463216 C10orf71Q711Q0 1435 aa32.43■■■□□ 2.78
TTC3-212ENST00000463216 USP42Q9H9J4 1324 aaKnown RBP32.43■■■□□ 2.78
TTC3-212ENST00000463216 DPEP1P16444 411 aa32.42■■■□□ 2.78
TTC3-212ENST00000463216 FKBP8Q14318 412 aa32.42■■■□□ 2.78
TTC3-212ENST00000463216 NPC1L1Q9UHC9 1359 aa32.41■■■□□ 2.78
TTC3-212ENST00000463216 MRC1P22897 1456 aa32.41■■■□□ 2.78
TTC3-212ENST00000463216 KIAA1551Q9HCM1 1747 aa32.4■■■□□ 2.78
TTC3-212ENST00000463216 ZPR1O75312 459 aa32.4■■■□□ 2.78
TTC3-212ENST00000463216 COL3A1P02461 1466 aaPredicted RBP32.38■■■□□ 2.77
TTC3-212ENST00000463216 ADCY9O60503 1353 aa32.38■■■□□ 2.77
TTC3-212ENST00000463216 FCHSD2O94868 740 aa32.37■■■□□ 2.77
TTC3-212ENST00000463216 CYP19A1P11511 503 aaPredicted RBP32.37■■■□□ 2.77
TTC3-212ENST00000463216 USPL1Q5W0Q7 1092 aa32.37■■■□□ 2.77
TTC3-212ENST00000463216 ARHGAP27Q6ZUM4 889 aa32.36■■■□□ 2.77
TTC3-212ENST00000463216 TTC5Q8N0Z6 440 aa32.36■■■□□ 2.77
TTC3-212ENST00000463216 KCPQ6ZWJ8 1503 aa32.36■■■□□ 2.77
TTC3-212ENST00000463216 DDR1Q08345 913 aa32.35■■■□□ 2.77
TTC3-212ENST00000463216 SOS1Q07889 1333 aaPredicted RBP32.34■■■□□ 2.77
TTC3-212ENST00000463216 TEFQ10587 303 aa32.34■■■□□ 2.77
TTC3-212ENST00000463216 GAS2L2Q8NHY3 880 aa32.34■■■□□ 2.77
TTC3-212ENST00000463216 ZBTB1Q9Y2K1 713 aa32.34■■■□□ 2.77
TTC3-212ENST00000463216 CFAP53Q96M91 514 aa32.33■■■□□ 2.77
TTC3-212ENST00000463216 ADAMTS7Q9UKP4 1686 aa32.33■■■□□ 2.77
TTC3-212ENST00000463216 GNAT3A8MTJ3 354 aa32.32■■■□□ 2.76
TTC3-212ENST00000463216 CANXP27824 592 aaKnown RBP32.31■■■□□ 2.76
TTC3-212ENST00000463216 COL15A1P39059 1388 aa32.31■■■□□ 2.76
TTC3-212ENST00000463216 VSIG10Q8N0Z9 540 aa32.3■■■□□ 2.76
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms