RNA–Protein interactions for RNA: ENST00000463093.5

SSBP1-203, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 5

Gene SSBP1, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-203ENST00000463093 SIK1P57059 783 aa18.01■□□□□ 0.47
SSBP1-203ENST00000463093 R3HDM1Q15032 1099 aaKnown RBP18.01■□□□□ 0.47
SSBP1-203ENST00000463093 MRS2Q9HD23 443 aa18.01■□□□□ 0.47
SSBP1-203ENST00000463093 CCDC146Q8IYE0 955 aa18■□□□□ 0.47
SSBP1-203ENST00000463093 ANO8Q9HCE9 1232 aaPredicted RBP18■□□□□ 0.47
SSBP1-203ENST00000463093 ITGB4P16144 1822 aa18■□□□□ 0.47
SSBP1-203ENST00000463093 TOGARAM1Q9Y4F4 1720 aa17.99■□□□□ 0.47
SSBP1-203ENST00000463093 PSDA5PKW4 1024 aaPredicted RBP17.99■□□□□ 0.47
SSBP1-203ENST00000463093 TMPOP42166 694 aaKnown RBP17.99■□□□□ 0.47
SSBP1-203ENST00000463093 TEFQ10587 303 aa17.99■□□□□ 0.47
SSBP1-203ENST00000463093 MCM10Q7L590 875 aa17.99■□□□□ 0.47
SSBP1-203ENST00000463093 STK32BQ9NY57 414 aa17.99■□□□□ 0.47
SSBP1-203ENST00000463093 CEMIPQ8WUJ3 1361 aa17.99■□□□□ 0.47
SSBP1-203ENST00000463093 RIPK4P57078 832 aa17.98■□□□□ 0.47
SSBP1-203ENST00000463093 DCTN1Q14203 1278 aa17.98■□□□□ 0.47
SSBP1-203ENST00000463093 SLC15A2Q16348 729 aa17.98■□□□□ 0.47
SSBP1-203ENST00000463093 AKT1S1Q96B36 256 aa17.98■□□□□ 0.47
SSBP1-203ENST00000463093 ATP6V1AP38606 617 aa17.97■□□□□ 0.47
SSBP1-203ENST00000463093 SLC39A6Q13433 755 aa17.97■□□□□ 0.47
SSBP1-203ENST00000463093 SLC4A9Q96Q91 983 aa17.97■□□□□ 0.47
SSBP1-203ENST00000463093 RBM42Q9BTD8 480 aaKnown RBP17.97■□□□□ 0.47
SSBP1-203ENST00000463093 RGPD3A6NKT7 1758 aaPredicted RBP17.96■□□□□ 0.47
SSBP1-203ENST00000463093 RGPD4Q7Z3J3 1758 aa17.96■□□□□ 0.47
SSBP1-203ENST00000463093 PTCD1O75127 700 aaKnown RBP17.96■□□□□ 0.47
SSBP1-203ENST00000463093 ITPK1Q13572 414 aa17.95■□□□□ 0.46
SSBP1-203ENST00000463093 TAF7Q15545 349 aaPredicted RBP17.95■□□□□ 0.46
SSBP1-203ENST00000463093 SCN11AQ9UI33 1791 aa17.94■□□□□ 0.46
SSBP1-203ENST00000463093 ZNF827Q17R98 1081 aa17.94■□□□□ 0.46
SSBP1-203ENST00000463093 DIEXFQ68CQ4 756 aaKnown RBP17.94■□□□□ 0.46
SSBP1-203ENST00000463093 RRP7AQ9Y3A4 280 aaKnown RBP17.94■□□□□ 0.46
SSBP1-203ENST00000463093 RREB1Q92766 1687 aa17.93■□□□□ 0.46
SSBP1-203ENST00000463093 BTBD11A6QL63 1104 aa17.93■□□□□ 0.46
SSBP1-203ENST00000463093 APAF1O14727 1248 aa17.93■□□□□ 0.46
SSBP1-203ENST00000463093 NEUROD2Q15784 382 aa17.93■□□□□ 0.46
SSBP1-203ENST00000463093 ZNF790Q6PG37 636 aa17.93■□□□□ 0.46
SSBP1-203ENST00000463093 LMOD3Q0VAK6 560 aa17.92■□□□□ 0.46
SSBP1-203ENST00000463093 LINC00116Q8NCU8 138 aa17.92■□□□□ 0.46
SSBP1-203ENST00000463093 THUMPD2Q9BTF0 503 aaKnown RBP17.92■□□□□ 0.46
SSBP1-203ENST00000463093 TFCP2L1Q9NZI6 479 aa17.92■□□□□ 0.46
SSBP1-203ENST00000463093 MRC1P22897 1456 aa17.92■□□□□ 0.46
SSBP1-203ENST00000463093 ADAMTS7Q9UKP4 1686 aa17.92■□□□□ 0.46
SSBP1-203ENST00000463093 KCNQ3O43525 872 aa17.91■□□□□ 0.46
SSBP1-203ENST00000463093 TTC5Q8N0Z6 440 aa17.91■□□□□ 0.46
SSBP1-203ENST00000463093 TRIM35Q9UPQ4 493 aa17.91■□□□□ 0.46
SSBP1-203ENST00000463093 LY75O60449 1722 aa17.91■□□□□ 0.46
SSBP1-203ENST00000463093 NUP188Q5SRE5 1749 aa17.91■□□□□ 0.46
SSBP1-203ENST00000463093 CCER2I3L3R5 266 aa17.9■□□□□ 0.46
SSBP1-203ENST00000463093 RC3H1Q5TC82 1133 aaKnown RBP17.9■□□□□ 0.46
SSBP1-203ENST00000463093 VSIG10Q8N0Z9 540 aa17.9■□□□□ 0.46
SSBP1-203ENST00000463093 ZNF496Q96IT1 587 aaPredicted RBP17.9■□□□□ 0.46
SSBP1-203ENST00000463093 MIS18AQ9NYP9 233 aa17.9■□□□□ 0.46
SSBP1-203ENST00000463093 PDGFDQ9GZP0 370 aaPredicted RBP17.89■□□□□ 0.45
SSBP1-203ENST00000463093 DNAJC10Q8IXB1 793 aa17.88■□□□□ 0.45
SSBP1-203ENST00000463093 FAM9BQ8IZU0 186 aa17.88■□□□□ 0.45
SSBP1-203ENST00000463093 FLAD1Q8NFF5 587 aa17.87■□□□□ 0.45
SSBP1-203ENST00000463093 AK7Q96M32 723 aa17.87■□□□□ 0.45
SSBP1-203ENST00000463093 FMNL2Q96PY5 1086 aa17.87■□□□□ 0.45
SSBP1-203ENST00000463093 BABAM1Q9NWV8 329 aa17.87■□□□□ 0.45
SSBP1-203ENST00000463093 COL23A1Q86Y22 540 aaPredicted RBP17.86■□□□□ 0.45
SSBP1-203ENST00000463093 TEX13AQ9BXU3 409 aaPredicted RBP17.86■□□□□ 0.45
SSBP1-203ENST00000463093 PNPLA7Q6ZV29 1317 aa17.86■□□□□ 0.45
SSBP1-203ENST00000463093 CYP19A1P11511 503 aaPredicted RBP17.85■□□□□ 0.45
SSBP1-203ENST00000463093 NCBP3Q53F19 620 aaKnown RBP17.85■□□□□ 0.45
SSBP1-203ENST00000463093 INTS5Q6P9B9 1019 aaKnown RBP17.85■□□□□ 0.45
SSBP1-203ENST00000463093 MIER1Q8N108 512 aa17.85■□□□□ 0.45
SSBP1-203ENST00000463093 CNTNAP4Q9C0A0 1308 aa17.85■□□□□ 0.45
SSBP1-203ENST00000463093 PAPPAQ13219 1627 aa17.84■□□□□ 0.45
SSBP1-203ENST00000463093 HEG1Q9ULI3 1381 aa17.84■□□□□ 0.45
SSBP1-203ENST00000463093 CHL1O00533 1208 aa17.84■□□□□ 0.45
SSBP1-203ENST00000463093 GNPATO15228 680 aa17.84■□□□□ 0.45
SSBP1-203ENST00000463093 RPS6KA4O75676 772 aa17.84■□□□□ 0.45
SSBP1-203ENST00000463093 STARD3NLO95772 234 aa17.84■□□□□ 0.45
SSBP1-203ENST00000463093 CRKLP46109 303 aaKnown RBP17.84■□□□□ 0.45
SSBP1-203ENST00000463093 AMIGO3Q86WK7 504 aa17.84■□□□□ 0.45
SSBP1-203ENST00000463093 SLC16A10Q8TF71 515 aa17.84■□□□□ 0.45
SSBP1-203ENST00000463093 DLG5Q8TDM6 1919 aa17.83■□□□□ 0.44
SSBP1-203ENST00000463093 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.83■□□□□ 0.44
SSBP1-203ENST00000463093 SNRPA1P09661 255 aaKnown RBP17.83■□□□□ 0.44
SSBP1-203ENST00000463093 SMIM5Q71RC9 77 aa17.83■□□□□ 0.44
SSBP1-203ENST00000463093 RTCBQ9Y3I0 505 aaKnown RBP17.83■□□□□ 0.44
SSBP1-203ENST00000463093 VIRMAQ69YN4 1812 aaKnown RBP17.82■□□□□ 0.44
SSBP1-203ENST00000463093 ZBTB7AO95365 584 aa17.82■□□□□ 0.44
SSBP1-203ENST00000463093 SSFA2P28290 1259 aa17.82■□□□□ 0.44
SSBP1-203ENST00000463093 EIF4A1P60842 406 aaKnown RBP17.82■□□□□ 0.44
SSBP1-203ENST00000463093 CCDC27Q2M243 656 aa17.82■□□□□ 0.44
SSBP1-203ENST00000463093 TRAPPC3LQ5T215 181 aa17.82■□□□□ 0.44
SSBP1-203ENST00000463093 SPON1Q9HCB6 807 aa17.82■□□□□ 0.44
SSBP1-203ENST00000463093 CCDC87Q9NVE4 849 aa17.82■□□□□ 0.44
SSBP1-203ENST00000463093 KCPQ6ZWJ8 1503 aa17.82■□□□□ 0.44
SSBP1-203ENST00000463093 MTFR1LQ9H019 292 aa17.81■□□□□ 0.44
SSBP1-203ENST00000463093 TSPYL4Q9UJ04 414 aa17.81■□□□□ 0.44
SSBP1-203ENST00000463093 ATF5Q9Y2D1 282 aaPredicted RBP17.81■□□□□ 0.44
SSBP1-203ENST00000463093 USP16Q9Y5T5 823 aa17.81■□□□□ 0.44
SSBP1-203ENST00000463093 PHF14O94880 888 aa17.8■□□□□ 0.44
SSBP1-203ENST00000463093 CALD1Q05682 793 aaKnown RBP17.8■□□□□ 0.44
SSBP1-203ENST00000463093 CFAP44Q96MT7 982 aa17.8■□□□□ 0.44
SSBP1-203ENST00000463093 TAF1LQ8IZX4 1826 aa17.79■□□□□ 0.44
SSBP1-203ENST00000463093 SIPA1L3O60292 1781 aaPredicted RBP17.79■□□□□ 0.44
SSBP1-203ENST00000463093 SENP3-EIF4A1A0A087X0R7 540 aa17.79■□□□□ 0.44
SSBP1-203ENST00000463093 GIGYF1O75420 1035 aaPredicted RBP17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms