RNA–Protein interactions for RNA: ENST00000462944.1

MDH1-209, Transcript of malate dehydrogenase 1, humanhuman

TSL 3

Gene MDH1, Length 634 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1-209ENST00000462944 PLEKHG2Q9H7P9 1386 aa12.75□□□□□ -0.37
MDH1-209ENST00000462944 NEUROD1Q13562 356 aa12.74□□□□□ -0.37
MDH1-209ENST00000462944 ZNF526Q8TF50 670 aaPredicted RBP12.74□□□□□ -0.37
MDH1-209ENST00000462944 SBF1O95248 1867 aa12.74□□□□□ -0.37
MDH1-209ENST00000462944 TNRC6CQ9HCJ0 1690 aaKnown RBP12.73□□□□□ -0.37
MDH1-209ENST00000462944 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.73□□□□□ -0.37
MDH1-209ENST00000462944 TGFB2P61812 414 aa12.73□□□□□ -0.37
MDH1-209ENST00000462944 MPRIPQ6WCQ1 1025 aa12.73□□□□□ -0.37
MDH1-209ENST00000462944 COL5A3P25940 1745 aaPredicted RBP12.73□□□□□ -0.37
MDH1-209ENST00000462944 NCAPD2Q15021 1401 aa12.72□□□□□ -0.37
MDH1-209ENST00000462944 NKX1-1Q15270 411 aaPredicted RBP12.72□□□□□ -0.37
MDH1-209ENST00000462944 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.72□□□□□ -0.37
MDH1-209ENST00000462944 SPG7Q9UQ90 795 aa12.71□□□□□ -0.37
MDH1-209ENST00000462944 C4AP0C0L4 1744 aa12.71□□□□□ -0.38
MDH1-209ENST00000462944 LOC102724428A0A0B4J2F2 783 aa12.7□□□□□ -0.38
MDH1-209ENST00000462944 FYB1O15117 783 aa12.7□□□□□ -0.38
MDH1-209ENST00000462944 CYP27B1O15528 508 aa12.7□□□□□ -0.38
MDH1-209ENST00000462944 SIK1P57059 783 aa12.7□□□□□ -0.38
MDH1-209ENST00000462944 RRS1Q15050 365 aaKnown RBP12.7□□□□□ -0.38
MDH1-209ENST00000462944 TESK2Q96S53 571 aa12.7□□□□□ -0.38
MDH1-209ENST00000462944 PXDNLA1KZ92 1463 aa12.7□□□□□ -0.38
MDH1-209ENST00000462944 TONSLQ96HA7 1378 aa12.69□□□□□ -0.38
MDH1-209ENST00000462944 PHF14O94880 888 aa12.69□□□□□ -0.38
MDH1-209ENST00000462944 NLGN1Q8N2Q7 840 aa12.69□□□□□ -0.38
MDH1-209ENST00000462944 USHBP1Q8N6Y0 703 aa12.69□□□□□ -0.38
MDH1-209ENST00000462944 DNAJC5GQ8N7S2 189 aa12.69□□□□□ -0.38
MDH1-209ENST00000462944 RBM46Q8TBY0 533 aaKnown RBP12.69□□□□□ -0.38
MDH1-209ENST00000462944 FSTL1Q12841 308 aa12.68□□□□□ -0.38
MDH1-209ENST00000462944 CDCA8Q53HL2 280 aa12.68□□□□□ -0.38
MDH1-209ENST00000462944 DIEXFQ68CQ4 756 aaKnown RBP12.68□□□□□ -0.38
MDH1-209ENST00000462944 PIGBQ92521 554 aa12.68□□□□□ -0.38
MDH1-209ENST00000462944 TMOD3Q9NYL9 352 aa12.68□□□□□ -0.38
MDH1-209ENST00000462944 C10orf71Q711Q0 1435 aa12.68□□□□□ -0.38
MDH1-209ENST00000462944 MYH14Q7Z406 1995 aaKnown RBP12.67□□□□□ -0.38
MDH1-209ENST00000462944 TMF1P82094 1093 aa12.67□□□□□ -0.38
MDH1-209ENST00000462944 HSP90AB2PQ58FF8 381 aa12.67□□□□□ -0.38
MDH1-209ENST00000462944 C16orf71Q8IYS4 520 aaPredicted RBP12.67□□□□□ -0.38
MDH1-209ENST00000462944 CCDC87Q9NVE4 849 aa12.67□□□□□ -0.38
MDH1-209ENST00000462944 CCDC88AQ3V6T2 1871 aa12.67□□□□□ -0.38
MDH1-209ENST00000462944 ST20-MTHFSA0A0A6YYL1 179 aa12.66□□□□□ -0.38
MDH1-209ENST00000462944 GNPATO15228 680 aa12.66□□□□□ -0.38
MDH1-209ENST00000462944 MMP10P09238 476 aa12.66□□□□□ -0.38
MDH1-209ENST00000462944 FBLN1P23142 703 aa12.66□□□□□ -0.38
MDH1-209ENST00000462944 LINC00116Q8NCU8 138 aa12.66□□□□□ -0.38
MDH1-209ENST00000462944 GGNBP2Q9H3C7 697 aa12.66□□□□□ -0.38
MDH1-209ENST00000462944 RTCBQ9Y3I0 505 aaKnown RBP12.66□□□□□ -0.38
MDH1-209ENST00000462944 KDM2BQ8NHM5 1336 aa12.65□□□□□ -0.38
MDH1-209ENST00000462944 ATP6V1AP38606 617 aa12.65□□□□□ -0.38
MDH1-209ENST00000462944 TRAPPC3LQ5T215 181 aa12.65□□□□□ -0.38
MDH1-209ENST00000462944 RC3H1Q5TC82 1133 aaKnown RBP12.65□□□□□ -0.38
MDH1-209ENST00000462944 AMIGO3Q86WK7 504 aa12.65□□□□□ -0.38
MDH1-209ENST00000462944 IFNL2Q8IZJ0 200 aa12.65□□□□□ -0.38
MDH1-209ENST00000462944 JMYQ8N9B5 988 aa12.65□□□□□ -0.38
MDH1-209ENST00000462944 BCS1LQ9Y276 419 aa12.65□□□□□ -0.38
MDH1-209ENST00000462944 KLRG1Q96E93 195 aa12.64□□□□□ -0.39
MDH1-209ENST00000462944 ZC3H4Q9UPT8 1303 aaKnown RBP12.63□□□□□ -0.39
MDH1-209ENST00000462944 VIRMAQ69YN4 1812 aaKnown RBP12.63□□□□□ -0.39
MDH1-209ENST00000462944 ARHGAP27Q6ZUM4 889 aa12.63□□□□□ -0.39
MDH1-209ENST00000462944 KDRP35968 1356 aa12.63□□□□□ -0.39
MDH1-209ENST00000462944 DLEC1Q9Y238 1755 aa12.63□□□□□ -0.39
MDH1-209ENST00000462944 WASHC2AQ641Q2 1341 aa12.62□□□□□ -0.39
MDH1-209ENST00000462944 CNTNAP4Q9C0A0 1308 aa12.62□□□□□ -0.39
MDH1-209ENST00000462944 ERVV-2B6SEH9 535 aa12.62□□□□□ -0.39
MDH1-209ENST00000462944 FCHSD2O94868 740 aa12.62□□□□□ -0.39
MDH1-209ENST00000462944 HSP90AB1P08238 724 aaKnown RBP12.62□□□□□ -0.39
MDH1-209ENST00000462944 POLA2Q14181 598 aa12.62□□□□□ -0.39
MDH1-209ENST00000462944 FOXD4L1Q9NU39 408 aa12.62□□□□□ -0.39
MDH1-209ENST00000462944 PARP3Q9Y6F1 533 aa12.62□□□□□ -0.39
MDH1-209ENST00000462944 DICER1Q9UPY3 1922 aaKnown RBP12.62□□□□□ -0.39
MDH1-209ENST00000462944 PHKG2P15735 406 aa12.61□□□□□ -0.39
MDH1-209ENST00000462944 RFC4P35249 363 aa12.61□□□□□ -0.39
MDH1-209ENST00000462944 ITPK1Q13572 414 aa12.61□□□□□ -0.39
MDH1-209ENST00000462944 RBM42Q9BTD8 480 aaKnown RBP12.61□□□□□ -0.39
MDH1-209ENST00000462944 NMRK2Q9NPI5 230 aa12.61□□□□□ -0.39
MDH1-209ENST00000462944 PIM2Q9P1W9 311 aa12.61□□□□□ -0.39
MDH1-209ENST00000462944 WWC3Q9ULE0 1092 aa12.61□□□□□ -0.39
MDH1-209ENST00000462944 ASAP1Q9ULH1 1129 aa12.61□□□□□ -0.39
MDH1-209ENST00000462944 AFDNP55196 1824 aaKnown RBP12.6□□□□□ -0.39
MDH1-209ENST00000462944 A0A0G2JLW4 131 aa12.6□□□□□ -0.39
MDH1-209ENST00000462944 RPS6KA4O75676 772 aa12.6□□□□□ -0.39
MDH1-209ENST00000462944 ATG3Q9NT62 314 aa12.6□□□□□ -0.39
MDH1-209ENST00000462944 SCN11AQ9UI33 1791 aa12.6□□□□□ -0.39
MDH1-209ENST00000462944 DPEP1P16444 411 aa12.59□□□□□ -0.39
MDH1-209ENST00000462944 C9orf131Q5VYM1 1079 aa12.59□□□□□ -0.39
MDH1-209ENST00000462944 SMC1BQ8NDV3 1235 aa12.59□□□□□ -0.39
MDH1-209ENST00000462944 DCAF5Q96JK2 942 aa12.59□□□□□ -0.39
MDH1-209ENST00000462944 GYS1P13807 737 aa12.58□□□□□ -0.4
MDH1-209ENST00000462944 DALRD3Q5D0E6 543 aaKnown RBP12.58□□□□□ -0.4
MDH1-209ENST00000462944 TIAM2Q8IVF5 1701 aa12.58□□□□□ -0.4
MDH1-209ENST00000462944 ARHGEF1Q92888 912 aaKnown RBP12.58□□□□□ -0.4
MDH1-209ENST00000462944 EMILIN1Q9Y6C2 1016 aa12.58□□□□□ -0.4
MDH1-209ENST00000462944 KCPQ6ZWJ8 1503 aa12.57□□□□□ -0.4
MDH1-209ENST00000462944 PRELPP51888 382 aa12.57□□□□□ -0.4
MDH1-209ENST00000462944 EYA1Q99502 592 aa12.57□□□□□ -0.4
MDH1-209ENST00000462944 TJP1Q07157 1748 aa12.57□□□□□ -0.4
MDH1-209ENST00000462944 NRXN2Q9P2S2 1712 aa12.57□□□□□ -0.4
MDH1-209ENST00000462944 PPM1GO15355 546 aaPredicted RBP12.56□□□□□ -0.4
MDH1-209ENST00000462944 KCNA3P22001 575 aa12.56□□□□□ -0.4
MDH1-209ENST00000462944 SMIM5Q71RC9 77 aa12.56□□□□□ -0.4
MDH1-209ENST00000462944 TNS4Q8IZW8 715 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms