RNA–Protein interactions for RNA: ENST00000462815.5

PTPN7-204, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,147 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-204ENST00000462815 SLC4A9Q96Q91 983 aa15.49■□□□□ 0.07
PTPN7-204ENST00000462815 ATG3Q9NT62 314 aa15.49■□□□□ 0.07
PTPN7-204ENST00000462815 IFNL2Q8IZJ0 200 aa15.48■□□□□ 0.07
PTPN7-204ENST00000462815 TMOD3Q9NYL9 352 aa15.48■□□□□ 0.07
PTPN7-204ENST00000462815 KDM6AO15550 1401 aaPredicted RBP15.48■□□□□ 0.07
PTPN7-204ENST00000462815 PXDNLA1KZ92 1463 aa15.46■□□□□ 0.07
PTPN7-204ENST00000462815 CLSPNQ9HAW4 1339 aa15.46■□□□□ 0.07
PTPN7-204ENST00000462815 GNPATO15228 680 aa15.45■□□□□ 0.06
PTPN7-204ENST00000462815 C4AP0C0L4 1744 aa15.45■□□□□ 0.06
PTPN7-204ENST00000462815 C10orf71Q711Q0 1435 aa15.44■□□□□ 0.06
PTPN7-204ENST00000462815 ATP6V1AP38606 617 aa15.44■□□□□ 0.06
PTPN7-204ENST00000462815 TJP1Q07157 1748 aa15.43■□□□□ 0.06
PTPN7-204ENST00000462815 MYH14Q7Z406 1995 aaKnown RBP15.42■□□□□ 0.06
PTPN7-204ENST00000462815 BRCA1P38398 1863 aaKnown RBP15.42■□□□□ 0.06
PTPN7-204ENST00000462815 ADAMTS7Q9UKP4 1686 aa15.42■□□□□ 0.06
PTPN7-204ENST00000462815 ERVV-2B6SEH9 535 aa15.42■□□□□ 0.06
PTPN7-204ENST00000462815 TNNT2P45379 298 aaPredicted RBP15.42■□□□□ 0.06
PTPN7-204ENST00000462815 CNTNAP4Q9C0A0 1308 aa15.42■□□□□ 0.06
PTPN7-204ENST00000462815 N4BP2Q86UW6 1770 aaPredicted RBP15.41■□□□□ 0.06
PTPN7-204ENST00000462815 MMP10P09238 476 aa15.41■□□□□ 0.06
PTPN7-204ENST00000462815 DCAF5Q96JK2 942 aa15.41■□□□□ 0.06
PTPN7-204ENST00000462815 PANK3Q9H999 370 aa15.41■□□□□ 0.06
PTPN7-204ENST00000462815 WWC3Q9ULE0 1092 aa15.41■□□□□ 0.06
PTPN7-204ENST00000462815 HSPA5P11021 654 aaKnown RBP15.4■□□□□ 0.06
PTPN7-204ENST00000462815 RC3H1Q5TC82 1133 aaKnown RBP15.4■□□□□ 0.06
PTPN7-204ENST00000462815 AEBP1Q8IUX7 1158 aa15.4■□□□□ 0.06
PTPN7-204ENST00000462815 GYS1P13807 737 aa15.39■□□□□ 0.05
PTPN7-204ENST00000462815 ARHGEF1Q92888 912 aaKnown RBP15.39■□□□□ 0.05
PTPN7-204ENST00000462815 ADRA2BP18089 450 aa15.38■□□□□ 0.05
PTPN7-204ENST00000462815 GPBP1L1Q9HC44 474 aaPredicted RBP15.38■□□□□ 0.05
PTPN7-204ENST00000462815 SCN11AQ9UI33 1791 aa15.38■□□□□ 0.05
PTPN7-204ENST00000462815 KIF3CO14782 793 aa15.37■□□□□ 0.05
PTPN7-204ENST00000462815 HSP90AB1P08238 724 aaKnown RBP15.37■□□□□ 0.05
PTPN7-204ENST00000462815 ZNF530Q6P9A1 599 aaPredicted RBP15.37■□□□□ 0.05
PTPN7-204ENST00000462815 RTCBQ9Y3I0 505 aaKnown RBP15.37■□□□□ 0.05
PTPN7-204ENST00000462815 MRC1P22897 1456 aa15.36■□□□□ 0.05
PTPN7-204ENST00000462815 RPS6KA4O75676 772 aa15.36■□□□□ 0.05
PTPN7-204ENST00000462815 EIF4G2P78344 907 aaKnown RBP eCLIP15.36■□□□□ 0.05
PTPN7-204ENST00000462815 AMOTQ4VCS5 1084 aa15.36■□□□□ 0.05
PTPN7-204ENST00000462815 PLEKHO1Q53GL0 409 aaPredicted RBP15.36■□□□□ 0.05
PTPN7-204ENST00000462815 TRAPPC3LQ5T215 181 aa15.36■□□□□ 0.05
PTPN7-204ENST00000462815 POLR3GLQ9BT43 218 aa15.36■□□□□ 0.05
PTPN7-204ENST00000462815 KCNA3P22001 575 aa15.35■□□□□ 0.05
PTPN7-204ENST00000462815 IL13P35225 146 aa15.35■□□□□ 0.05
PTPN7-204ENST00000462815 TGFB2P61812 414 aa15.35■□□□□ 0.05
PTPN7-204ENST00000462815 NLGN1Q8N2Q7 840 aa15.35■□□□□ 0.05
PTPN7-204ENST00000462815 ZNF526Q8TF50 670 aaPredicted RBP15.35■□□□□ 0.05
PTPN7-204ENST00000462815 RBM42Q9BTD8 480 aaKnown RBP15.35■□□□□ 0.05
PTPN7-204ENST00000462815 ARFGEF1Q9Y6D6 1849 aa15.33■□□□□ 0.05
PTPN7-204ENST00000462815 A0A0G2JLW4 131 aa15.33■□□□□ 0.04
PTPN7-204ENST00000462815 HSPA6P17066 643 aa15.33■□□□□ 0.04
PTPN7-204ENST00000462815 CABP4P57796 275 aa15.33■□□□□ 0.04
PTPN7-204ENST00000462815 AMER1Q5JTC6 1135 aaPredicted RBP15.33■□□□□ 0.04
PTPN7-204ENST00000462815 KCPQ6ZWJ8 1503 aa15.33■□□□□ 0.04
PTPN7-204ENST00000462815 DPEP1P16444 411 aa15.32■□□□□ 0.04
PTPN7-204ENST00000462815 CRKLP46109 303 aaKnown RBP15.32■□□□□ 0.04
PTPN7-204ENST00000462815 MTHFSP49914 203 aa15.32■□□□□ 0.04
PTPN7-204ENST00000462815 SULT6B1Q6IMI4 303 aa15.32■□□□□ 0.04
PTPN7-204ENST00000462815 NFATC2IPQ8NCF5 419 aa15.32■□□□□ 0.04
PTPN7-204ENST00000462815 USP42Q9H9J4 1324 aaKnown RBP15.32■□□□□ 0.04
PTPN7-204ENST00000462815 PTCD1O75127 700 aaKnown RBP15.31■□□□□ 0.04
PTPN7-204ENST00000462815 DDR1Q08345 913 aa15.31■□□□□ 0.04
PTPN7-204ENST00000462815 IFFO2Q5TF58 517 aa15.31■□□□□ 0.04
PTPN7-204ENST00000462815 INTS5Q6P9B9 1019 aaKnown RBP15.31■□□□□ 0.04
PTPN7-204ENST00000462815 MORC1Q86VD1 984 aa15.31■□□□□ 0.04
PTPN7-204ENST00000462815 PCGF6Q9BYE7 350 aa15.31■□□□□ 0.04
PTPN7-204ENST00000462815 SRP68Q9UHB9 627 aaKnown RBP15.31■□□□□ 0.04
PTPN7-204ENST00000462815 VIRMAQ69YN4 1812 aaKnown RBP15.31■□□□□ 0.04
PTPN7-204ENST00000462815 RFC4P35249 363 aa15.3■□□□□ 0.04
PTPN7-204ENST00000462815 FKBP8Q14318 412 aa15.3■□□□□ 0.04
PTPN7-204ENST00000462815 CCDC87Q9NVE4 849 aa15.3■□□□□ 0.04
PTPN7-204ENST00000462815 NRXN2Q9P2S2 1712 aa15.3■□□□□ 0.04
PTPN7-204ENST00000462815 BCS1LQ9Y276 419 aa15.3■□□□□ 0.04
PTPN7-204ENST00000462815 UBR2Q8IWV8 1755 aa15.29■□□□□ 0.04
PTPN7-204ENST00000462815 AKAP4Q5JQC9 854 aa15.28■□□□□ 0.04
PTPN7-204ENST00000462815 C1orf141Q5JVX7 400 aa15.28■□□□□ 0.04
PTPN7-204ENST00000462815 LGR6Q9HBX8 967 aa15.28■□□□□ 0.04
PTPN7-204ENST00000462815 PARP3Q9Y6F1 533 aa15.28■□□□□ 0.04
PTPN7-204ENST00000462815 COL3A1P02461 1466 aaPredicted RBP15.27■□□□□ 0.04
PTPN7-204ENST00000462815 SOS1Q07889 1333 aaPredicted RBP15.27■□□□□ 0.04
PTPN7-204ENST00000462815 POLRMTO00411 1230 aaKnown RBP15.27■□□□□ 0.04
PTPN7-204ENST00000462815 TM4SF1P30408 202 aa15.27■□□□□ 0.04
PTPN7-204ENST00000462815 SLC52A2Q9HAB3 445 aa15.27■□□□□ 0.04
PTPN7-204ENST00000462815 KIF7Q2M1P5 1343 aa15.26■□□□□ 0.03
PTPN7-204ENST00000462815 PER1O15534 1290 aaPredicted RBP15.26■□□□□ 0.03
PTPN7-204ENST00000462815 DNAJC10Q8IXB1 793 aa15.26■□□□□ 0.03
PTPN7-204ENST00000462815 AFDNP55196 1824 aaKnown RBP15.26■□□□□ 0.03
PTPN7-204ENST00000462815 DLEC1Q9Y238 1755 aa15.26■□□□□ 0.03
PTPN7-204ENST00000462815 FCHSD2O94868 740 aa15.25■□□□□ 0.03
PTPN7-204ENST00000462815 NMRK2Q9NPI5 230 aa15.25■□□□□ 0.03
PTPN7-204ENST00000462815 KNSTRNQ9Y448 316 aa15.25■□□□□ 0.03
PTPN7-204ENST00000462815 PCNTO95613 3336 aa15.24■□□□□ 0.03
PTPN7-204ENST00000462815 RNMTO43148 476 aaKnown RBP15.24■□□□□ 0.03
PTPN7-204ENST00000462815 CYP19A1P11511 503 aaPredicted RBP15.24■□□□□ 0.03
PTPN7-204ENST00000462815 ARHGAP27Q6ZUM4 889 aa15.24■□□□□ 0.03
PTPN7-204ENST00000462815 SBF1O95248 1867 aa15.23■□□□□ 0.03
PTPN7-204ENST00000462815 CHRNA5P30532 468 aa15.23■□□□□ 0.03
PTPN7-204ENST00000462815 SLC39A6Q13433 755 aa15.23■□□□□ 0.03
PTPN7-204ENST00000462815 USPL1Q5W0Q7 1092 aa15.23■□□□□ 0.03
PTPN7-204ENST00000462815 DNAJC5GQ8N7S2 189 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms