RNA–Protein interactions for RNA: ENST00000462258.1

SF3A3-204, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-204ENST00000462258 AK7Q96M32 723 aa13.72□□□□□ -0.21
SF3A3-204ENST00000462258 ARXQ96QS3 562 aa13.72□□□□□ -0.21
SF3A3-204ENST00000462258 ATG3Q9NT62 314 aa13.72□□□□□ -0.21
SF3A3-204ENST00000462258 C4AP0C0L4 1744 aa13.72□□□□□ -0.21
SF3A3-204ENST00000462258 MAP3K5Q99683 1374 aa13.71□□□□□ -0.21
SF3A3-204ENST00000462258 MSH5O43196 834 aa13.71□□□□□ -0.21
SF3A3-204ENST00000462258 POLD1P28340 1107 aa13.71□□□□□ -0.21
SF3A3-204ENST00000462258 CABP4P57796 275 aa13.71□□□□□ -0.21
SF3A3-204ENST00000462258 AKAP4Q5JQC9 854 aa13.71□□□□□ -0.21
SF3A3-204ENST00000462258 COL23A1Q86Y22 540 aaPredicted RBP13.71□□□□□ -0.21
SF3A3-204ENST00000462258 LINC00116Q8NCU8 138 aa13.71□□□□□ -0.21
SF3A3-204ENST00000462258 FHDC1Q9C0D6 1143 aaPredicted RBP13.71□□□□□ -0.21
SF3A3-204ENST00000462258 SIPA1L3O60292 1781 aaPredicted RBP13.71□□□□□ -0.22
SF3A3-204ENST00000462258 UBR2Q8IWV8 1755 aa13.71□□□□□ -0.22
SF3A3-204ENST00000462258 U2SURPO15042 1029 aaKnown RBP13.7□□□□□ -0.22
SF3A3-204ENST00000462258 ATP6V1AP38606 617 aa13.7□□□□□ -0.22
SF3A3-204ENST00000462258 ITPK1Q13572 414 aa13.7□□□□□ -0.22
SF3A3-204ENST00000462258 CFAP53Q96M91 514 aa13.7□□□□□ -0.22
SF3A3-204ENST00000462258 PHF14O94880 888 aa13.69□□□□□ -0.22
SF3A3-204ENST00000462258 FLAD1Q8NFF5 587 aa13.69□□□□□ -0.22
SF3A3-204ENST00000462258 SSFA2P28290 1259 aa13.68□□□□□ -0.22
SF3A3-204ENST00000462258 PPP2R1AP30153 589 aa13.68□□□□□ -0.22
SF3A3-204ENST00000462258 MSL1Q68DK7 614 aa13.68□□□□□ -0.22
SF3A3-204ENST00000462258 AMIGO3Q86WK7 504 aa13.68□□□□□ -0.22
SF3A3-204ENST00000462258 SYT17Q9BSW7 474 aa13.68□□□□□ -0.22
SF3A3-204ENST00000462258 RBM42Q9BTD8 480 aaKnown RBP13.68□□□□□ -0.22
SF3A3-204ENST00000462258 MYH14Q7Z406 1995 aaKnown RBP13.68□□□□□ -0.22
SF3A3-204ENST00000462258 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.67□□□□□ -0.22
SF3A3-204ENST00000462258 DCAF8L1A6NGE4 600 aa13.67□□□□□ -0.22
SF3A3-204ENST00000462258 GNPATO15228 680 aa13.67□□□□□ -0.22
SF3A3-204ENST00000462258 MTHFSDQ2M296 383 aaKnown RBP13.67□□□□□ -0.22
SF3A3-204ENST00000462258 KLHL34Q8N239 644 aa13.67□□□□□ -0.22
SF3A3-204ENST00000462258 SLC4A9Q96Q91 983 aa13.67□□□□□ -0.22
SF3A3-204ENST00000462258 KCPQ6ZWJ8 1503 aa13.67□□□□□ -0.22
SF3A3-204ENST00000462258 UTRNP46939 3433 aa13.67□□□□□ -0.22
SF3A3-204ENST00000462258 NFATC2IPQ8NCF5 419 aa13.66□□□□□ -0.22
SF3A3-204ENST00000462258 SLC52A2Q9HAB3 445 aa13.66□□□□□ -0.22
SF3A3-204ENST00000462258 CNTNAP4Q9C0A0 1308 aa13.65□□□□□ -0.22
SF3A3-204ENST00000462258 RNMTO43148 476 aaKnown RBP13.65□□□□□ -0.22
SF3A3-204ENST00000462258 ADRA2BP18089 450 aa13.65□□□□□ -0.22
SF3A3-204ENST00000462258 SMIM5Q71RC9 77 aa13.65□□□□□ -0.22
SF3A3-204ENST00000462258 PTCD1O75127 700 aaKnown RBP13.64□□□□□ -0.23
SF3A3-204ENST00000462258 GAS2L2Q8NHY3 880 aa13.64□□□□□ -0.23
SF3A3-204ENST00000462258 LGR6Q9HBX8 967 aa13.64□□□□□ -0.23
SF3A3-204ENST00000462258 NUDCQ9Y266 331 aa13.64□□□□□ -0.23
SF3A3-204ENST00000462258 CHD4Q14839 1912 aa13.64□□□□□ -0.23
SF3A3-204ENST00000462258 PRKAR2BP31323 418 aa13.63□□□□□ -0.23
SF3A3-204ENST00000462258 RSPH6AQ9H0K4 717 aa13.63□□□□□ -0.23
SF3A3-204ENST00000462258 DLG5Q8TDM6 1919 aa13.62□□□□□ -0.23
SF3A3-204ENST00000462258 GOLGB1Q14789 3259 aaKnown RBP13.62□□□□□ -0.23
SF3A3-204ENST00000462258 RTCBQ9Y3I0 505 aaKnown RBP13.62□□□□□ -0.23
SF3A3-204ENST00000462258 KIF13BQ9NQT8 1826 aa13.62□□□□□ -0.23
SF3A3-204ENST00000462258 U2AF1L5P0DN76 240 aaPredicted RBP13.61□□□□□ -0.23
SF3A3-204ENST00000462258 U2AF1Q01081 240 aaKnown RBP eCLIP13.61□□□□□ -0.23
SF3A3-204ENST00000462258 RC3H1Q5TC82 1133 aaKnown RBP13.61□□□□□ -0.23
SF3A3-204ENST00000462258 GNAT3A8MTJ3 354 aa13.6□□□□□ -0.23
SF3A3-204ENST00000462258 SLC39A6Q13433 755 aa13.6□□□□□ -0.23
SF3A3-204ENST00000462258 NLGN2Q8NFZ4 835 aa13.6□□□□□ -0.23
SF3A3-204ENST00000462258 CEMIPQ8WUJ3 1361 aa13.59□□□□□ -0.23
SF3A3-204ENST00000462258 KIAA1551Q9HCM1 1747 aa13.59□□□□□ -0.23
SF3A3-204ENST00000462258 CRKLP46109 303 aaKnown RBP13.59□□□□□ -0.23
SF3A3-204ENST00000462258 TEFQ10587 303 aa13.59□□□□□ -0.23
SF3A3-204ENST00000462258 TRAPPC3LQ5T215 181 aa13.59□□□□□ -0.23
SF3A3-204ENST00000462258 PHACTR3Q96KR7 559 aa13.59□□□□□ -0.23
SF3A3-204ENST00000462258 RPS6KA4O75676 772 aa13.58□□□□□ -0.24
SF3A3-204ENST00000462258 YY1P25490 414 aa13.58□□□□□ -0.24
SF3A3-204ENST00000462258 DNAJC10Q8IXB1 793 aa13.58□□□□□ -0.24
SF3A3-204ENST00000462258 SCN7AQ01118 1682 aa13.58□□□□□ -0.24
SF3A3-204ENST00000462258 FCHSD2O94868 740 aa13.57□□□□□ -0.24
SF3A3-204ENST00000462258 TTC5Q8N0Z6 440 aa13.57□□□□□ -0.24
SF3A3-204ENST00000462258 IL17REQ8NFR9 667 aa13.57□□□□□ -0.24
SF3A3-204ENST00000462258 ARHGEF1Q92888 912 aaKnown RBP13.57□□□□□ -0.24
SF3A3-204ENST00000462258 LAMB4A4D0S4 1761 aa13.57□□□□□ -0.24
SF3A3-204ENST00000462258 KDM3BQ7LBC6 1761 aa13.56□□□□□ -0.24
SF3A3-204ENST00000462258 RFC4P35249 363 aa13.56□□□□□ -0.24
SF3A3-204ENST00000462258 DDX10Q13206 875 aaKnown RBP13.56□□□□□ -0.24
SF3A3-204ENST00000462258 GPR162Q16538 588 aa13.56□□□□□ -0.24
SF3A3-204ENST00000462258 PELP1Q8IZL8 1130 aaKnown RBP13.56□□□□□ -0.24
SF3A3-204ENST00000462258 CCDC87Q9NVE4 849 aa13.56□□□□□ -0.24
SF3A3-204ENST00000462258 CD2APQ9Y5K6 639 aa13.56□□□□□ -0.24
SF3A3-204ENST00000462258 C10orf71Q711Q0 1435 aa13.56□□□□□ -0.24
SF3A3-204ENST00000462258 N4BP2Q86UW6 1770 aaPredicted RBP13.55□□□□□ -0.24
SF3A3-204ENST00000462258 MMP10P09238 476 aa13.55□□□□□ -0.24
SF3A3-204ENST00000462258 GYS1P13807 737 aa13.55□□□□□ -0.24
SF3A3-204ENST00000462258 RALBP1Q15311 655 aa13.55□□□□□ -0.24
SF3A3-204ENST00000462258 VSIG10Q8N0Z9 540 aa13.55□□□□□ -0.24
SF3A3-204ENST00000462258 SOS1Q07889 1333 aaPredicted RBP13.55□□□□□ -0.24
SF3A3-204ENST00000462258 USP42Q9H9J4 1324 aaKnown RBP13.55□□□□□ -0.24
SF3A3-204ENST00000462258 COL15A1P39059 1388 aa13.55□□□□□ -0.24
SF3A3-204ENST00000462258 BRCA1P38398 1863 aaKnown RBP13.55□□□□□ -0.24
SF3A3-204ENST00000462258 BCORQ6W2J9 1755 aa13.54□□□□□ -0.24
SF3A3-204ENST00000462258 CYP19A1P11511 503 aaPredicted RBP13.54□□□□□ -0.24
SF3A3-204ENST00000462258 INTS5Q6P9B9 1019 aaKnown RBP13.54□□□□□ -0.24
SF3A3-204ENST00000462258 ZNF790Q6PG37 636 aa13.54□□□□□ -0.24
SF3A3-204ENST00000462258 ZBTB1Q9Y2K1 713 aa13.54□□□□□ -0.24
SF3A3-204ENST00000462258 HEG1Q9ULI3 1381 aa13.54□□□□□ -0.24
SF3A3-204ENST00000462258 NEFMP07197 916 aa13.53□□□□□ -0.24
SF3A3-204ENST00000462258 NLGN1Q8N2Q7 840 aa13.53□□□□□ -0.24
SF3A3-204ENST00000462258 RTF1Q92541 710 aaKnown RBP13.53□□□□□ -0.24
SF3A3-204ENST00000462258 ZNF496Q96IT1 587 aaPredicted RBP13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms