RNA–Protein interactions for RNA: ENST00000462146.6

PDZRN3-203, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,927 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-203ENST00000462146 CRB1P82279 1406 aa14.33□□□□□ -0.12
PDZRN3-203ENST00000462146 KIAA0232Q92628 1395 aa14.32□□□□□ -0.12
PDZRN3-203ENST00000462146 ZNF500O60304 480 aaPredicted RBP14.32□□□□□ -0.12
PDZRN3-203ENST00000462146 ZBTB7CA1YPR0 619 aa14.31□□□□□ -0.12
PDZRN3-203ENST00000462146 HS1BP3Q53T59 392 aa14.31□□□□□ -0.12
PDZRN3-203ENST00000462146 ESYT1Q9BSJ8 1104 aa14.31□□□□□ -0.12
PDZRN3-203ENST00000462146 OSBPL3Q9H4L5 887 aa14.31□□□□□ -0.12
PDZRN3-203ENST00000462146 ZKSCAN5Q9Y2L8 839 aa14.31□□□□□ -0.12
PDZRN3-203ENST00000462146 RGPD1P0DJD0 1748 aa14.31□□□□□ -0.12
PDZRN3-203ENST00000462146 BRD1O95696 1058 aa14.31□□□□□ -0.12
PDZRN3-203ENST00000462146 RILPL2Q969X0 211 aa14.31□□□□□ -0.12
PDZRN3-203ENST00000462146 PDCL3Q9H2J4 239 aa14.31□□□□□ -0.12
PDZRN3-203ENST00000462146 SALL3Q9BXA9 1300 aa14.31□□□□□ -0.12
PDZRN3-203ENST00000462146 PNMA6EA0A0J9YXQ4 647 aa14.31□□□□□ -0.12
PDZRN3-203ENST00000462146 MLECQ14165 292 aa14.31□□□□□ -0.12
PDZRN3-203ENST00000462146 UNC5CLQ8IV45 518 aa14.31□□□□□ -0.12
PDZRN3-203ENST00000462146 UPF3BQ9BZI7 483 aaKnown RBP14.31□□□□□ -0.12
PDZRN3-203ENST00000462146 IL25Q9H293 177 aa14.31□□□□□ -0.12
PDZRN3-203ENST00000462146 HMMRO75330 724 aa14.3□□□□□ -0.12
PDZRN3-203ENST00000462146 MPNDQ8N594 471 aa14.3□□□□□ -0.12
PDZRN3-203ENST00000462146 NECTIN2Q92692 538 aa14.3□□□□□ -0.12
PDZRN3-203ENST00000462146 ANO2Q9NQ90 1003 aa14.3□□□□□ -0.12
PDZRN3-203ENST00000462146 FAM13BQ9NYF5 915 aa14.3□□□□□ -0.12
PDZRN3-203ENST00000462146 GADD45BO75293 160 aaPredicted RBP14.3□□□□□ -0.12
PDZRN3-203ENST00000462146 TPRNQ4KMQ1 711 aa14.3□□□□□ -0.12
PDZRN3-203ENST00000462146 TRIM6-TRIM34B2RNG4 842 aa14.29□□□□□ -0.12
PDZRN3-203ENST00000462146 TSPYL4Q9UJ04 414 aa14.29□□□□□ -0.12
PDZRN3-203ENST00000462146 UQCRHLA0A096LP55 91 aa14.29□□□□□ -0.12
PDZRN3-203ENST00000462146 UQCRHP07919 91 aa14.29□□□□□ -0.12
PDZRN3-203ENST00000462146 CUL4AQ13619 759 aa14.28□□□□□ -0.12
PDZRN3-203ENST00000462146 MX1P20591 662 aa14.28□□□□□ -0.12
PDZRN3-203ENST00000462146 CHMLP26374 656 aa14.28□□□□□ -0.12
PDZRN3-203ENST00000462146 HAP1P54257 671 aaPredicted RBP14.28□□□□□ -0.12
PDZRN3-203ENST00000462146 MTHFSDQ2M296 383 aaKnown RBP14.28□□□□□ -0.12
PDZRN3-203ENST00000462146 ARID3AQ99856 593 aa14.28□□□□□ -0.12
PDZRN3-203ENST00000462146 MAP3K19Q56UN5 1328 aa14.28□□□□□ -0.12
PDZRN3-203ENST00000462146 TTC21BQ7Z4L5 1316 aa14.27□□□□□ -0.12
PDZRN3-203ENST00000462146 GNAI2P04899 355 aa14.27□□□□□ -0.12
PDZRN3-203ENST00000462146 LRRCC1Q9C099 1032 aa14.27□□□□□ -0.12
PDZRN3-203ENST00000462146 SPATA31D1Q6ZQQ2 1576 aa14.27□□□□□ -0.13
PDZRN3-203ENST00000462146 XRN1Q8IZH2 1706 aaKnown RBP14.27□□□□□ -0.13
PDZRN3-203ENST00000462146 MBD3O95983 291 aa14.27□□□□□ -0.13
PDZRN3-203ENST00000462146 FMN2Q9NZ56 1722 aa14.27□□□□□ -0.13
PDZRN3-203ENST00000462146 FAM208AQ9UK61 1670 aaKnown RBP14.26□□□□□ -0.13
PDZRN3-203ENST00000462146 OVOS2A0A0J9YW53 1432 aa14.26□□□□□ -0.13
PDZRN3-203ENST00000462146 OVOS2Q6IE36 1432 aa14.26□□□□□ -0.13
PDZRN3-203ENST00000462146 MAP4K4O95819 1239 aaPredicted RBP14.26□□□□□ -0.13
PDZRN3-203ENST00000462146 CCT4P50991 539 aaKnown RBP14.26□□□□□ -0.13
PDZRN3-203ENST00000462146 NALCNQ8IZF0 1738 aa14.26□□□□□ -0.13
PDZRN3-203ENST00000462146 DTNBO60941 627 aa14.26□□□□□ -0.13
PDZRN3-203ENST00000462146 TSPY26PQ9H489 355 aa14.26□□□□□ -0.13
PDZRN3-203ENST00000462146 ACEP12821 1306 aa14.26□□□□□ -0.13
PDZRN3-203ENST00000462146 CCDC39Q9UFE4 941 aa14.25□□□□□ -0.13
PDZRN3-203ENST00000462146 TERF1P54274 439 aa14.25□□□□□ -0.13
PDZRN3-203ENST00000462146 LARP6Q9BRS8 491 aaKnown RBP14.25□□□□□ -0.13
PDZRN3-203ENST00000462146 IL1RAPL2Q9NP60 686 aa14.25□□□□□ -0.13
PDZRN3-203ENST00000462146 USP48Q86UV5 1035 aa14.25□□□□□ -0.13
PDZRN3-203ENST00000462146 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.24□□□□□ -0.13
PDZRN3-203ENST00000462146 MCCP23508 829 aa14.24□□□□□ -0.13
PDZRN3-203ENST00000462146 FKBP5Q13451 457 aaPredicted RBP14.24□□□□□ -0.13
PDZRN3-203ENST00000462146 JARID2Q92833 1246 aaPredicted RBP14.24□□□□□ -0.13
PDZRN3-203ENST00000462146 LRRFIP2Q9Y608 721 aaKnown RBP14.24□□□□□ -0.13
PDZRN3-203ENST00000462146 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.24□□□□□ -0.13
PDZRN3-203ENST00000462146 MCM2P49736 904 aa14.24□□□□□ -0.13
PDZRN3-203ENST00000462146 FLIIQ13045 1269 aa14.24□□□□□ -0.13
PDZRN3-203ENST00000462146 ZNF830Q96NB3 372 aaPredicted RBP14.24□□□□□ -0.13
PDZRN3-203ENST00000462146 ROBO2Q9HCK4 1378 aa14.24□□□□□ -0.13
PDZRN3-203ENST00000462146 PTMAP06454 111 aaKnown RBP14.23□□□□□ -0.13
PDZRN3-203ENST00000462146 NUTM1Q86Y26 1132 aa14.23□□□□□ -0.13
PDZRN3-203ENST00000462146 RTF1Q92541 710 aaKnown RBP14.23□□□□□ -0.13
PDZRN3-203ENST00000462146 CEP170BQ9Y4F5 1589 aaPredicted RBP14.23□□□□□ -0.13
PDZRN3-203ENST00000462146 RPAP1Q9BWH6 1393 aaPredicted RBP14.23□□□□□ -0.13
PDZRN3-203ENST00000462146 TOPAZ1Q8N9V7 1692 aa14.22□□□□□ -0.13
PDZRN3-203ENST00000462146 ATP8B2P98198 1209 aa14.22□□□□□ -0.13
PDZRN3-203ENST00000462146 INTS4Q96HW7 963 aaKnown RBP14.22□□□□□ -0.13
PDZRN3-203ENST00000462146 SRCIN1Q9C0H9 1055 aa14.22□□□□□ -0.13
PDZRN3-203ENST00000462146 ANAPC15P60006 121 aa14.21□□□□□ -0.13
PDZRN3-203ENST00000462146 STK31Q9BXU1 1019 aa14.21□□□□□ -0.13
PDZRN3-203ENST00000462146 CNPY2Q9Y2B0 182 aa14.21□□□□□ -0.13
PDZRN3-203ENST00000462146 AGLP35573 1532 aa14.21□□□□□ -0.13
PDZRN3-203ENST00000462146 MCM5P33992 734 aa14.21□□□□□ -0.14
PDZRN3-203ENST00000462146 USP25Q9UHP3 1055 aa14.21□□□□□ -0.14
PDZRN3-203ENST00000462146 TECPR2O15040 1411 aa14.2□□□□□ -0.14
PDZRN3-203ENST00000462146 USP6P35125 1406 aa14.2□□□□□ -0.14
PDZRN3-203ENST00000462146 CSPP1Q1MSJ5 1256 aa14.2□□□□□ -0.14
PDZRN3-203ENST00000462146 C17orf53Q8N3J3 647 aaPredicted RBP14.2□□□□□ -0.14
PDZRN3-203ENST00000462146 STAP2Q9UGK3 403 aa14.2□□□□□ -0.14
PDZRN3-203ENST00000462146 SSH2Q76I76 1423 aa14.2□□□□□ -0.14
PDZRN3-203ENST00000462146 ARHGEF10O15013 1369 aa14.2□□□□□ -0.14
PDZRN3-203ENST00000462146 SASS6Q6UVJ0 657 aa14.19□□□□□ -0.14
PDZRN3-203ENST00000462146 GNAI3P08754 354 aa14.19□□□□□ -0.14
PDZRN3-203ENST00000462146 CPA1P15085 419 aa14.19□□□□□ -0.14
PDZRN3-203ENST00000462146 HSPA4P34932 840 aa14.19□□□□□ -0.14
PDZRN3-203ENST00000462146 TSC1Q92574 1164 aa14.19□□□□□ -0.14
PDZRN3-203ENST00000462146 SYAP1Q96A49 352 aaPredicted RBP14.19□□□□□ -0.14
PDZRN3-203ENST00000462146 EYA1Q99502 592 aa14.19□□□□□ -0.14
PDZRN3-203ENST00000462146 N4BP2Q86UW6 1770 aaPredicted RBP14.19□□□□□ -0.14
PDZRN3-203ENST00000462146 USP44Q9H0E7 712 aa14.18□□□□□ -0.14
PDZRN3-203ENST00000462146 WDR33Q9C0J8 1336 aaKnown RBP14.18□□□□□ -0.14
PDZRN3-203ENST00000462146 LRRC37A3O60309 1634 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms