RNA–Protein interactions for RNA: ENST00000461768.5

SRRM1-204, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 3

Gene SRRM1, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-204ENST00000461768 NUP188Q5SRE5 1749 aa11.15□□□□□ -0.62
SRRM1-204ENST00000461768 TMPOP42166 694 aaKnown RBP11.15□□□□□ -0.62
SRRM1-204ENST00000461768 MIER1Q8N108 512 aa11.15□□□□□ -0.62
SRRM1-204ENST00000461768 PROM2Q8N271 834 aa11.15□□□□□ -0.62
SRRM1-204ENST00000461768 RTF1Q92541 710 aaKnown RBP11.15□□□□□ -0.62
SRRM1-204ENST00000461768 PAPPAQ13219 1627 aa11.15□□□□□ -0.62
SRRM1-204ENST00000461768 PALLDQ8WX93 1383 aa11.15□□□□□ -0.63
SRRM1-204ENST00000461768 RIPK4P57078 832 aa11.14□□□□□ -0.63
SRRM1-204ENST00000461768 TXNRD1Q16881 649 aa11.14□□□□□ -0.63
SRRM1-204ENST00000461768 MCM10Q7L590 875 aa11.14□□□□□ -0.63
SRRM1-204ENST00000461768 SMARCC1Q92922 1105 aaPredicted RBP11.14□□□□□ -0.63
SRRM1-204ENST00000461768 ATG3Q9NT62 314 aa11.14□□□□□ -0.63
SRRM1-204ENST00000461768 ASAP1Q9ULH1 1129 aa11.14□□□□□ -0.63
SRRM1-204ENST00000461768 APAF1O14727 1248 aa11.13□□□□□ -0.63
SRRM1-204ENST00000461768 TEFQ10587 303 aa11.13□□□□□ -0.63
SRRM1-204ENST00000461768 DCTN1Q14203 1278 aa11.13□□□□□ -0.63
SRRM1-204ENST00000461768 FAM9BQ8IZU0 186 aa11.13□□□□□ -0.63
SRRM1-204ENST00000461768 RRP7AQ9Y3A4 280 aaKnown RBP11.13□□□□□ -0.63
SRRM1-204ENST00000461768 ZNF831Q5JPB2 1677 aa11.12□□□□□ -0.63
SRRM1-204ENST00000461768 LMOD3Q0VAK6 560 aa11.12□□□□□ -0.63
SRRM1-204ENST00000461768 NEUROD2Q15784 382 aa11.12□□□□□ -0.63
SRRM1-204ENST00000461768 SLC27A3Q5K4L6 730 aa11.12□□□□□ -0.63
SRRM1-204ENST00000461768 TRIM35Q9UPQ4 493 aa11.12□□□□□ -0.63
SRRM1-204ENST00000461768 UBR2Q8IWV8 1755 aa11.11□□□□□ -0.63
SRRM1-204ENST00000461768 THUMPD2Q9BTF0 503 aaKnown RBP11.11□□□□□ -0.63
SRRM1-204ENST00000461768 LRRC4BQ9NT99 713 aa11.11□□□□□ -0.63
SRRM1-204ENST00000461768 CCNL1Q9UK58 526 aaPredicted RBP11.11□□□□□ -0.63
SRRM1-204ENST00000461768 C5P01031 1676 aa11.11□□□□□ -0.63
SRRM1-204ENST00000461768 KCPQ6ZWJ8 1503 aa11.1□□□□□ -0.63
SRRM1-204ENST00000461768 CICQ96RK0 1608 aaPredicted RBP11.1□□□□□ -0.63
SRRM1-204ENST00000461768 LOC102724428A0A0B4J2F2 783 aa11.1□□□□□ -0.63
SRRM1-204ENST00000461768 SIK1P57059 783 aa11.1□□□□□ -0.63
SRRM1-204ENST00000461768 SLC39A6Q13433 755 aa11.1□□□□□ -0.63
SRRM1-204ENST00000461768 TAF1LQ8IZX4 1826 aa11.09□□□□□ -0.63
SRRM1-204ENST00000461768 KDM3BQ7LBC6 1761 aa11.09□□□□□ -0.63
SRRM1-204ENST00000461768 BTBD11A6QL63 1104 aa11.09□□□□□ -0.63
SRRM1-204ENST00000461768 KCNQ4P56696 695 aa11.09□□□□□ -0.63
SRRM1-204ENST00000461768 TAF7Q15545 349 aaPredicted RBP11.09□□□□□ -0.63
SRRM1-204ENST00000461768 NCBP3Q53F19 620 aaKnown RBP11.09□□□□□ -0.63
SRRM1-204ENST00000461768 SLC4A9Q96Q91 983 aa11.09□□□□□ -0.63
SRRM1-204ENST00000461768 ZNF790Q6PG37 636 aa11.08□□□□□ -0.64
SRRM1-204ENST00000461768 TTC5Q8N0Z6 440 aa11.08□□□□□ -0.64
SRRM1-204ENST00000461768 RBM42Q9BTD8 480 aaKnown RBP11.08□□□□□ -0.64
SRRM1-204ENST00000461768 COL5A3P25940 1745 aaPredicted RBP11.08□□□□□ -0.64
SRRM1-204ENST00000461768 TJP1Q07157 1748 aa11.08□□□□□ -0.64
SRRM1-204ENST00000461768 KCNQ3O43525 872 aa11.07□□□□□ -0.64
SRRM1-204ENST00000461768 PTCD1O75127 700 aaKnown RBP11.07□□□□□ -0.64
SRRM1-204ENST00000461768 HMGB2P26583 209 aaKnown RBP11.07□□□□□ -0.64
SRRM1-204ENST00000461768 ATP6V1AP38606 617 aa11.07□□□□□ -0.64
SRRM1-204ENST00000461768 ITPK1Q13572 414 aa11.07□□□□□ -0.64
SRRM1-204ENST00000461768 CCDC27Q2M243 656 aa11.07□□□□□ -0.64
SRRM1-204ENST00000461768 NBPF14Q5TI25 921 aa11.07□□□□□ -0.64
SRRM1-204ENST00000461768 VSIG10Q8N0Z9 540 aa11.07□□□□□ -0.64
SRRM1-204ENST00000461768 ANO8Q9HCE9 1232 aaPredicted RBP11.07□□□□□ -0.64
SRRM1-204ENST00000461768 C4BP0C0L5 1744 aa11.06□□□□□ -0.64
SRRM1-204ENST00000461768 SENP3-EIF4A1A0A087X0R7 540 aa11.06□□□□□ -0.64
SRRM1-204ENST00000461768 MSH5O43196 834 aa11.06□□□□□ -0.64
SRRM1-204ENST00000461768 ZNF827Q17R98 1081 aa11.06□□□□□ -0.64
SRRM1-204ENST00000461768 LINC00116Q8NCU8 138 aa11.06□□□□□ -0.64
SRRM1-204ENST00000461768 AKT1S1Q96B36 256 aa11.06□□□□□ -0.64
SRRM1-204ENST00000461768 ZNF496Q96IT1 587 aaPredicted RBP11.06□□□□□ -0.64
SRRM1-204ENST00000461768 BABAM1Q9NWV8 329 aa11.06□□□□□ -0.64
SRRM1-204ENST00000461768 MIS18AQ9NYP9 233 aa11.06□□□□□ -0.64
SRRM1-204ENST00000461768 HEG1Q9ULI3 1381 aa11.05□□□□□ -0.64
SRRM1-204ENST00000461768 SLC15A2Q16348 729 aa11.05□□□□□ -0.64
SRRM1-204ENST00000461768 QSER1Q2KHR3 1735 aa11.05□□□□□ -0.64
SRRM1-204ENST00000461768 WWC1Q8IX03 1113 aa11.05□□□□□ -0.64
SRRM1-204ENST00000461768 FMNL2Q96PY5 1086 aa11.05□□□□□ -0.64
SRRM1-204ENST00000461768 STK32BQ9NY57 414 aa11.05□□□□□ -0.64
SRRM1-204ENST00000461768 TUBGCP6Q96RT7 1819 aa11.05□□□□□ -0.64
SRRM1-204ENST00000461768 CHL1O00533 1208 aa11.04□□□□□ -0.64
SRRM1-204ENST00000461768 ZNF853P0CG23 659 aa11.04□□□□□ -0.64
SRRM1-204ENST00000461768 CALD1Q05682 793 aaKnown RBP11.04□□□□□ -0.64
SRRM1-204ENST00000461768 R3HDM1Q15032 1099 aaKnown RBP11.04□□□□□ -0.64
SRRM1-204ENST00000461768 NGEFQ8N5V2 710 aa11.04□□□□□ -0.64
SRRM1-204ENST00000461768 CFAP44Q96MT7 982 aa11.04□□□□□ -0.64
SRRM1-204ENST00000461768 TSPYL4Q9UJ04 414 aa11.04□□□□□ -0.64
SRRM1-204ENST00000461768 PSDA5PKW4 1024 aaPredicted RBP11.03□□□□□ -0.64
SRRM1-204ENST00000461768 EIF4A1P60842 406 aaKnown RBP11.03□□□□□ -0.64
SRRM1-204ENST00000461768 DNAJC10Q8IXB1 793 aa11.03□□□□□ -0.64
SRRM1-204ENST00000461768 IFT57Q9NWB7 429 aa11.03□□□□□ -0.64
SRRM1-204ENST00000461768 UBR3Q6ZT12 1888 aa11.03□□□□□ -0.64
SRRM1-204ENST00000461768 CNTNAP4Q9C0A0 1308 aa11.03□□□□□ -0.64
SRRM1-204ENST00000461768 MYH14Q7Z406 1995 aaKnown RBP11.03□□□□□ -0.64
SRRM1-204ENST00000461768 CASZ1Q86V15 1759 aa11.03□□□□□ -0.64
SRRM1-204ENST00000461768 CYP19A1P11511 503 aaPredicted RBP11.02□□□□□ -0.65
SRRM1-204ENST00000461768 GNAI1P63096 354 aa11.02□□□□□ -0.65
SRRM1-204ENST00000461768 RC3H1Q5TC82 1133 aaKnown RBP11.02□□□□□ -0.65
SRRM1-204ENST00000461768 AK7Q96M32 723 aa11.02□□□□□ -0.65
SRRM1-204ENST00000461768 TEX13AQ9BXU3 409 aaPredicted RBP11.02□□□□□ -0.65
SRRM1-204ENST00000461768 TFCP2L1Q9NZI6 479 aa11.02□□□□□ -0.65
SRRM1-204ENST00000461768 SALL2Q9Y467 1007 aaPredicted RBP11.02□□□□□ -0.65
SRRM1-204ENST00000461768 LAS1LQ9Y4W2 734 aaKnown RBP11.02□□□□□ -0.65
SRRM1-204ENST00000461768 IL16Q14005 1332 aa11.02□□□□□ -0.65
SRRM1-204ENST00000461768 LAMB4A4D0S4 1761 aa11.01□□□□□ -0.65
SRRM1-204ENST00000461768 PRAMEF22A3QJZ6 481 aa11.01□□□□□ -0.65
SRRM1-204ENST00000461768 SNRPA1P09661 255 aaKnown RBP11.01□□□□□ -0.65
SRRM1-204ENST00000461768 CRKLP46109 303 aaKnown RBP11.01□□□□□ -0.65
SRRM1-204ENST00000461768 AMIGO3Q86WK7 504 aa11.01□□□□□ -0.65
SRRM1-204ENST00000461768 WDR63Q8IWG1 891 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms