RNA–Protein interactions for RNA: ENST00000461689.5

NEK4-203, Transcript of NIMA related kinase 4, humanhuman

TSL 5

Gene NEK4, Length 2,276 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-203ENST00000461689 HDGFL1Q5TGJ6 251 aa16.89■□□□□ 0.29
NEK4-203ENST00000461689 MEIS3Q99687 375 aa16.89■□□□□ 0.29
NEK4-203ENST00000461689 SPATA31A3Q5VYP0 1347 aa16.89■□□□□ 0.29
NEK4-203ENST00000461689 HOXB7P09629 217 aa16.89■□□□□ 0.29
NEK4-203ENST00000461689 TNS3Q68CZ2 1445 aa16.88■□□□□ 0.29
NEK4-203ENST00000461689 CEP85Q6P2H3 762 aa16.88■□□□□ 0.29
NEK4-203ENST00000461689 NLRP2Q9NX02 1062 aa16.88■□□□□ 0.29
NEK4-203ENST00000461689 LMTK3Q96Q04 1460 aa16.88■□□□□ 0.29
NEK4-203ENST00000461689 CABLES1Q8TDN4 633 aa16.87■□□□□ 0.29
NEK4-203ENST00000461689 RAPGEF4Q8WZA2 1011 aa16.87■□□□□ 0.29
NEK4-203ENST00000461689 LMO7Q8WWI1 1683 aa16.87■□□□□ 0.29
NEK4-203ENST00000461689 RGPD5Q99666 1765 aa16.87■□□□□ 0.29
NEK4-203ENST00000461689 BRINP3Q76B58 766 aa16.86■□□□□ 0.29
NEK4-203ENST00000461689 OVOS2A0A0G2JMS6 1433 aa16.86■□□□□ 0.29
NEK4-203ENST00000461689 CAMTA1Q9Y6Y1 1673 aa16.86■□□□□ 0.29
NEK4-203ENST00000461689 PXDNQ92626 1479 aa16.85■□□□□ 0.29
NEK4-203ENST00000461689 ATP10DQ9P241 1426 aa16.85■□□□□ 0.29
NEK4-203ENST00000461689 EIF2S2P20042 333 aaKnown RBP16.85■□□□□ 0.29
NEK4-203ENST00000461689 STRCQ7RTU9 1775 aa16.85■□□□□ 0.29
NEK4-203ENST00000461689 KCNQ3O43525 872 aa16.85■□□□□ 0.29
NEK4-203ENST00000461689 HMMRO75330 724 aa16.85■□□□□ 0.29
NEK4-203ENST00000461689 CSB-PGBD3P0DP91 1061 aa16.85■□□□□ 0.29
NEK4-203ENST00000461689 BMP2KLQ5H9B9 411 aa16.85■□□□□ 0.29
NEK4-203ENST00000461689 SLAIN2Q9P270 581 aa16.85■□□□□ 0.29
NEK4-203ENST00000461689 GNAI2P04899 355 aa16.84■□□□□ 0.29
NEK4-203ENST00000461689 GNAI3P08754 354 aa16.84■□□□□ 0.29
NEK4-203ENST00000461689 TATP17735 454 aaPredicted RBP16.84■□□□□ 0.29
NEK4-203ENST00000461689 TBC1D32Q96NH3 1257 aa16.84■□□□□ 0.29
NEK4-203ENST00000461689 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.84■□□□□ 0.291e-6■■□□□ 13.7
NEK4-203ENST00000461689 XIRP1Q702N8 1843 aaKnown RBP16.83■□□□□ 0.29
NEK4-203ENST00000461689 CHRNA2Q15822 529 aa16.83■□□□□ 0.28
NEK4-203ENST00000461689 SPG7Q9UQ90 795 aa16.83■□□□□ 0.28
NEK4-203ENST00000461689 FAM208AQ9UK61 1670 aaKnown RBP16.83■□□□□ 0.28
NEK4-203ENST00000461689 ZNF335Q9H4Z2 1342 aaPredicted RBP16.83■□□□□ 0.28
NEK4-203ENST00000461689 KDM3BQ7LBC6 1761 aa16.82■□□□□ 0.28
NEK4-203ENST00000461689 PHAXQ9H814 394 aaKnown RBP16.82■□□□□ 0.28
NEK4-203ENST00000461689 CPDO75976 1380 aa16.82■□□□□ 0.28
NEK4-203ENST00000461689 SLC4A3P48751 1232 aa16.81■□□□□ 0.28
NEK4-203ENST00000461689 COL18A1P39060 1754 aa16.81■□□□□ 0.28
NEK4-203ENST00000461689 CHPF2Q9P2E5 772 aa16.8■□□□□ 0.28
NEK4-203ENST00000461689 ABCC6O95255 1503 aa16.8■□□□□ 0.28
NEK4-203ENST00000461689 GIGYF1O75420 1035 aaPredicted RBP16.8■□□□□ 0.28
NEK4-203ENST00000461689 DBF4Q9UBU7 674 aaPredicted RBP16.8■□□□□ 0.28
NEK4-203ENST00000461689 SOS2Q07890 1332 aaPredicted RBP16.79■□□□□ 0.28
NEK4-203ENST00000461689 MFAP1P55081 439 aaKnown RBP16.79■□□□□ 0.28
NEK4-203ENST00000461689 BECN1Q14457 450 aa16.79■□□□□ 0.28
NEK4-203ENST00000461689 PLEKHM2Q8IWE5 1019 aa16.79■□□□□ 0.28
NEK4-203ENST00000461689 PXDNLA1KZ92 1463 aa16.79■□□□□ 0.28
NEK4-203ENST00000461689 PLEKHG2Q9H7P9 1386 aa16.79■□□□□ 0.28
NEK4-203ENST00000461689 PHKG2P15735 406 aa16.79■□□□□ 0.28
NEK4-203ENST00000461689 IFNL2Q8IZJ0 200 aa16.79■□□□□ 0.28
NEK4-203ENST00000461689 C22orf23Q9BZE7 217 aa16.79■□□□□ 0.28
NEK4-203ENST00000461689 HEG1Q9ULI3 1381 aa16.78■□□□□ 0.28
NEK4-203ENST00000461689 USP44Q9H0E7 712 aa16.78■□□□□ 0.28
NEK4-203ENST00000461689 ATP8B2P98198 1209 aa16.77■□□□□ 0.28
NEK4-203ENST00000461689 SRCIN1Q9C0H9 1055 aa16.77■□□□□ 0.28
NEK4-203ENST00000461689 NBR1Q14596 966 aa16.77■□□□□ 0.27
NEK4-203ENST00000461689 SLC52A2Q9HAB3 445 aa16.77■□□□□ 0.27
NEK4-203ENST00000461689 C16orf71Q8IYS4 520 aaPredicted RBP16.76■□□□□ 0.27
NEK4-203ENST00000461689 DNAAF4Q8WXU2 420 aa16.76■□□□□ 0.27
NEK4-203ENST00000461689 PI4KAP2A4QPH2 592 aa16.76■□□□□ 0.27
NEK4-203ENST00000461689 UBTFL1P0CB47 393 aaPredicted RBP16.76■□□□□ 0.27
NEK4-203ENST00000461689 PI4KAP1Q8N8J0 262 aa16.76■□□□□ 0.27
NEK4-203ENST00000461689 PRDM11Q9NQV5 511 aa16.76■□□□□ 0.27
NEK4-203ENST00000461689 CRYBG1Q9Y4K1 1723 aa16.75■□□□□ 0.27
NEK4-203ENST00000461689 APBB1O00213 710 aa16.75■□□□□ 0.27
NEK4-203ENST00000461689 ZNF790Q6PG37 636 aa16.75■□□□□ 0.27
NEK4-203ENST00000461689 ADAMTS7Q9UKP4 1686 aa16.75■□□□□ 0.27
NEK4-203ENST00000461689 MEGF6O75095 1541 aa16.75■□□□□ 0.27
NEK4-203ENST00000461689 NFATC2IPQ8NCF5 419 aa16.75■□□□□ 0.27
NEK4-203ENST00000461689 DCAF5Q96JK2 942 aa16.75■□□□□ 0.27
NEK4-203ENST00000461689 BCL11AQ9H165 835 aa16.75■□□□□ 0.27
NEK4-203ENST00000461689 HSP90AB1P08238 724 aaKnown RBP16.74■□□□□ 0.27
NEK4-203ENST00000461689 LRRFIP2Q9Y608 721 aaKnown RBP16.74■□□□□ 0.27
NEK4-203ENST00000461689 SMARCA5O60264 1052 aaPredicted RBP16.73■□□□□ 0.27
NEK4-203ENST00000461689 ANXA1P04083 346 aa16.73■□□□□ 0.27
NEK4-203ENST00000461689 BEND3Q5T5X7 828 aa16.73■□□□□ 0.27
NEK4-203ENST00000461689 HYPKQ9NX55 129 aa16.73■□□□□ 0.27
NEK4-203ENST00000461689 SIPA1L3O60292 1781 aaPredicted RBP16.73■□□□□ 0.27
NEK4-203ENST00000461689 CYP27B1O15528 508 aa16.73■□□□□ 0.27
NEK4-203ENST00000461689 EIF5BO60841 1220 aaKnown RBP16.73■□□□□ 0.27
NEK4-203ENST00000461689 TTC22Q5TAA0 569 aa16.73■□□□□ 0.27
NEK4-203ENST00000461689 PNMA6EA0A0J9YXQ4 647 aa16.72■□□□□ 0.27
NEK4-203ENST00000461689 TBC1D9Q6ZT07 1266 aa16.72■□□□□ 0.27
NEK4-203ENST00000461689 KDM6AO15550 1401 aaPredicted RBP16.72■□□□□ 0.27
NEK4-203ENST00000461689 N4BP2Q86UW6 1770 aaPredicted RBP16.72■□□□□ 0.27
NEK4-203ENST00000461689 WDR17Q8IZU2 1322 aa16.72■□□□□ 0.27
NEK4-203ENST00000461689 CDC45O75419 566 aa16.72■□□□□ 0.27
NEK4-203ENST00000461689 GSPT1P15170 499 aaKnown RBP16.72■□□□□ 0.27
NEK4-203ENST00000461689 PRAMEF22A3QJZ6 481 aa16.71■□□□□ 0.27
NEK4-203ENST00000461689 SLC39A6Q13433 755 aa16.71■□□□□ 0.27
NEK4-203ENST00000461689 KSR2Q6VAB6 950 aa16.71■□□□□ 0.27
NEK4-203ENST00000461689 TOM1L2Q6ZVM7 507 aa16.71■□□□□ 0.27
NEK4-203ENST00000461689 DDX21Q9NR30 783 aaKnown RBP eCLIP16.71■□□□□ 0.27
NEK4-203ENST00000461689 SCN11AQ9UI33 1791 aa16.71■□□□□ 0.27
NEK4-203ENST00000461689 RBM25P49756 843 aaKnown RBP16.71■□□□□ 0.27
NEK4-203ENST00000461689 OTUD7AQ8TE49 926 aaPredicted RBP16.71■□□□□ 0.27
NEK4-203ENST00000461689 EXOC6BQ9Y2D4 811 aa16.71■□□□□ 0.27
NEK4-203ENST00000461689 ADCY9O60503 1353 aa16.7■□□□□ 0.26
NEK4-203ENST00000461689 PROSER3Q2NL68 480 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms