RNA–Protein interactions for RNA: ENST00000461674.5

LRCH3-210, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 537 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-210ENST00000461674 DDX41Q9UJV9 622 aaKnown RBP10.07□□□□□ -0.8
LRCH3-210ENST00000461674 MRPL42Q9Y6G3 142 aaKnown RBP10.07□□□□□ -0.8
LRCH3-210ENST00000461674 FOXO3O43524 673 aa10.06□□□□□ -0.8
LRCH3-210ENST00000461674 XRCC5P13010 732 aaKnown RBP10.06□□□□□ -0.8
LRCH3-210ENST00000461674 NAA30Q147X3 362 aaPredicted RBP10.06□□□□□ -0.8
LRCH3-210ENST00000461674 TMED8Q6PL24 325 aaPredicted RBP10.06□□□□□ -0.8
LRCH3-210ENST00000461674 ADAM32Q8TC27 787 aa10.06□□□□□ -0.8
LRCH3-210ENST00000461674 KHSRPQ92945 711 aaKnown RBP eCLIP10.06□□□□□ -0.89e-9■■■□□ 17.8
LRCH3-210ENST00000461674 CRELD1Q96HD1 420 aa10.06□□□□□ -0.8
LRCH3-210ENST00000461674 MRFAP1L1Q96HT8 127 aa10.06□□□□□ -0.8
LRCH3-210ENST00000461674 PRDM16Q9HAZ2 1276 aa10.06□□□□□ -0.8
LRCH3-210ENST00000461674 MAGEC2Q9UBF1 373 aaPredicted RBP10.06□□□□□ -0.8
LRCH3-210ENST00000461674 ENPP3O14638 875 aa10.05□□□□□ -0.8
LRCH3-210ENST00000461674 HDGFP51858 240 aaKnown RBP10.05□□□□□ -0.8
LRCH3-210ENST00000461674 NBPF14Q5TI25 921 aa10.05□□□□□ -0.8
LRCH3-210ENST00000461674 BCCIPQ9P287 314 aaKnown RBP eCLIP10.05□□□□□ -0.8
LRCH3-210ENST00000461674 WWC3Q9ULE0 1092 aa10.05□□□□□ -0.8
LRCH3-210ENST00000461674 GPR182O15218 404 aa10.04□□□□□ -0.8
LRCH3-210ENST00000461674 IGFBP4P22692 258 aa10.04□□□□□ -0.8
LRCH3-210ENST00000461674 KMT5BQ4FZB7 885 aa10.04□□□□□ -0.8
LRCH3-210ENST00000461674 ARSIQ5FYB1 569 aa10.04□□□□□ -0.8
LRCH3-210ENST00000461674 ALG1LQ6GMV1 187 aa10.04□□□□□ -0.8
LRCH3-210ENST00000461674 TSEN2Q8NCE0 465 aaKnown RBP10.04□□□□□ -0.8
LRCH3-210ENST00000461674 SLC27A5Q9Y2P5 690 aa10.04□□□□□ -0.8
LRCH3-210ENST00000461674 GNA15P30679 374 aa10.03□□□□□ -0.8
LRCH3-210ENST00000461674 CTHP32929 405 aa10.03□□□□□ -0.8
LRCH3-210ENST00000461674 RACK1P63244 317 aaKnown RBP10.03□□□□□ -0.8
LRCH3-210ENST00000461674 ENOX2Q16206 610 aaKnown RBP10.03□□□□□ -0.8
LRCH3-210ENST00000461674 ZNF394Q53GI3 561 aa10.03□□□□□ -0.8
LRCH3-210ENST00000461674 RNF20Q5VTR2 975 aa10.03□□□□□ -0.8
LRCH3-210ENST00000461674 ALKBH2Q6NS38 261 aa10.03□□□□□ -0.8
LRCH3-210ENST00000461674 USB1Q9BQ65 265 aaKnown RBP10.03□□□□□ -0.8
LRCH3-210ENST00000461674 PCDH12Q9NPG4 1184 aa10.03□□□□□ -0.8
LRCH3-210ENST00000461674 KIAA1468Q9P260 1216 aa10.03□□□□□ -0.8
LRCH3-210ENST00000461674 CHPF2Q9P2E5 772 aa10.03□□□□□ -0.8
LRCH3-210ENST00000461674 LHX6Q9UPM6 363 aa10.03□□□□□ -0.8
LRCH3-210ENST00000461674 CCDC194A0A1B0GVG4 234 aa10.02□□□□□ -0.81
LRCH3-210ENST00000461674 FILIP1Q7Z7B0 1213 aa10.02□□□□□ -0.81
LRCH3-210ENST00000461674 USP48Q86UV5 1035 aa10.02□□□□□ -0.81
LRCH3-210ENST00000461674 MORC4Q8TE76 937 aa10.02□□□□□ -0.81
LRCH3-210ENST00000461674 ARHGAP9Q9BRR9 750 aa10.02□□□□□ -0.81
LRCH3-210ENST00000461674 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.02□□□□□ -0.81
LRCH3-210ENST00000461674 FAN1Q9Y2M0 1017 aa10.02□□□□□ -0.81
LRCH3-210ENST00000461674 PCDHGB7Q9Y5F8 929 aa10.02□□□□□ -0.81
LRCH3-210ENST00000461674 POTEFA5A3E0 1075 aa10.01□□□□□ -0.81
LRCH3-210ENST00000461674 FZD6O60353 706 aa10.01□□□□□ -0.81
LRCH3-210ENST00000461674 JUNDP17535 347 aa10.01□□□□□ -0.81
LRCH3-210ENST00000461674 PLEKHG6Q3KR16 790 aa10.01□□□□□ -0.81
LRCH3-210ENST00000461674 NBPF6Q5VWK0 638 aa10.01□□□□□ -0.81
LRCH3-210ENST00000461674 RNF19BQ6ZMZ0 732 aa10.01□□□□□ -0.81
LRCH3-210ENST00000461674 NBPF4Q96M43 638 aa10.01□□□□□ -0.81
LRCH3-210ENST00000461674 SETDB2Q96T68 719 aa10.01□□□□□ -0.81
LRCH3-210ENST00000461674 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.01□□□□□ -0.817e-7■■□□□ 13.4
LRCH3-210ENST00000461674 CCDC87Q9NVE4 849 aa10.01□□□□□ -0.81
LRCH3-210ENST00000461674 IFT57Q9NWB7 429 aa10.01□□□□□ -0.81
LRCH3-210ENST00000461674 K7ELQ4 463 aaPredicted RBP10□□□□□ -0.81
LRCH3-210ENST00000461674 MAP4K4O95819 1239 aaPredicted RBP10□□□□□ -0.81
LRCH3-210ENST00000461674 EIF1AXP47813 144 aaKnown RBP10□□□□□ -0.81
LRCH3-210ENST00000461674 GJA8P48165 433 aa10□□□□□ -0.81
LRCH3-210ENST00000461674 PTPN12Q05209 780 aaKnown RBP10□□□□□ -0.81
LRCH3-210ENST00000461674 ZSWIM6Q9HCJ5 1215 aa10□□□□□ -0.81
LRCH3-210ENST00000461674 PNMA6FA0A0J9YX94 578 aa9.99□□□□□ -0.81
LRCH3-210ENST00000461674 SERINC3Q13530 473 aa9.99□□□□□ -0.81
LRCH3-210ENST00000461674 DZIP3Q86Y13 1208 aaKnown RBP9.99□□□□□ -0.81
LRCH3-210ENST00000461674 CKAP2LQ8IYA6 745 aa9.99□□□□□ -0.81
LRCH3-210ENST00000461674 IRF2BPLQ9H1B7 796 aa9.99□□□□□ -0.81
LRCH3-210ENST00000461674 DNAJC6O75061 913 aa9.98□□□□□ -0.81
LRCH3-210ENST00000461674 DOK7Q18PE1 504 aa9.98□□□□□ -0.81
LRCH3-210ENST00000461674 PUS10Q3MIT2 529 aaKnown RBP9.98□□□□□ -0.81
LRCH3-210ENST00000461674 BLOC1S3Q6QNY0 202 aa9.98□□□□□ -0.81
LRCH3-210ENST00000461674 ZBTB33Q86T24 672 aa9.98□□□□□ -0.81
LRCH3-210ENST00000461674 FBF1Q8TES7 1133 aa9.98□□□□□ -0.81
LRCH3-210ENST00000461674 MKL1Q969V6 931 aa9.98□□□□□ -0.81
LRCH3-210ENST00000461674 FRMD6Q96NE9 622 aa9.98□□□□□ -0.81
LRCH3-210ENST00000461674 SRA1Q9HD15 236 aaKnown RBP9.98□□□□□ -0.81
LRCH3-210ENST00000461674 SALL2Q9Y467 1007 aaPredicted RBP9.98□□□□□ -0.81
LRCH3-210ENST00000461674 ESPNB1AK53 854 aa9.97□□□□□ -0.81
LRCH3-210ENST00000461674 CTSHP09668 335 aa9.97□□□□□ -0.81
LRCH3-210ENST00000461674 ATF4P18848 351 aaPredicted RBP9.97□□□□□ -0.81
LRCH3-210ENST00000461674 USP4Q13107 963 aa9.97□□□□□ -0.81
LRCH3-210ENST00000461674 TAF7LQ5H9L4 462 aa9.97□□□□□ -0.81
LRCH3-210ENST00000461674 GPR153Q6NV75 609 aa9.97□□□□□ -0.81
LRCH3-210ENST00000461674 C16orf46Q6P387 395 aa9.97□□□□□ -0.81
LRCH3-210ENST00000461674 HS2ST1Q7LGA3 356 aa9.97□□□□□ -0.81
LRCH3-210ENST00000461674 RPUSD2Q8IZ73 545 aaKnown RBP9.97□□□□□ -0.81
LRCH3-210ENST00000461674 SPC25Q9HBM1 224 aa9.97□□□□□ -0.81
LRCH3-210ENST00000461674 PRKAB1Q9Y478 270 aa9.97□□□□□ -0.81
LRCH3-210ENST00000461674 RIMBP2O15034 1052 aa9.96□□□□□ -0.82
LRCH3-210ENST00000461674 PEX14O75381 377 aa9.96□□□□□ -0.82
LRCH3-210ENST00000461674 CCNYL3P0C7X3 344 aa9.96□□□□□ -0.82
LRCH3-210ENST00000461674 AAMPQ13685 434 aa9.96□□□□□ -0.82
LRCH3-210ENST00000461674 SLC39A7Q92504 469 aa9.96□□□□□ -0.82
LRCH3-210ENST00000461674 TMX1Q9H3N1 280 aa9.96□□□□□ -0.82
LRCH3-210ENST00000461674 AK5Q9Y6K8 562 aa9.96□□□□□ -0.82
LRCH3-210ENST00000461674 U2SURPO15042 1029 aaKnown RBP9.95□□□□□ -0.82
LRCH3-210ENST00000461674 ACTN4O43707 911 aaKnown RBP9.95□□□□□ -0.82
LRCH3-210ENST00000461674 GIGYF1O75420 1035 aaPredicted RBP9.95□□□□□ -0.82
LRCH3-210ENST00000461674 PLEKHG4Q58EX7 1191 aa9.95□□□□□ -0.82
LRCH3-210ENST00000461674 ZBTB24O43167 697 aaPredicted RBP9.94□□□□□ -0.82
LRCH3-210ENST00000461674 S100BP04271 92 aaPredicted RBP9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 129.3 ms