RNA–Protein interactions for RNA: ENST00000461195.5

TRAF4-207, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 787 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-207ENST00000461195 C4BP0C0L5 1744 aa30.11■■■□□ 2.41
TRAF4-207ENST00000461195 NFATC2IPQ8NCF5 419 aa30.11■■■□□ 2.41
TRAF4-207ENST00000461195 U2AF1L5P0DN76 240 aaPredicted RBP30.1■■■□□ 2.41
TRAF4-207ENST00000461195 U2AF1Q01081 240 aaKnown RBP eCLIP30.1■■■□□ 2.413e-7■■□□□ 12.8
TRAF4-207ENST00000461195 RALBP1Q15311 655 aa30.09■■■□□ 2.41
TRAF4-207ENST00000461195 SLC16A10Q8TF71 515 aa30.09■■■□□ 2.41
TRAF4-207ENST00000461195 RSPH6AQ9H0K4 717 aa30.09■■■□□ 2.41
TRAF4-207ENST00000461195 RNMTO43148 476 aaKnown RBP30.08■■■□□ 2.41
TRAF4-207ENST00000461195 PRKAR2BP31323 418 aa30.08■■■□□ 2.41
TRAF4-207ENST00000461195 ATP6V1AP38606 617 aa30.08■■■□□ 2.41
TRAF4-207ENST00000461195 GAS2L2Q8NHY3 880 aa30.08■■■□□ 2.41
TRAF4-207ENST00000461195 LGR6Q9HBX8 967 aa30.08■■■□□ 2.41
TRAF4-207ENST00000461195 ZNF831Q5JPB2 1677 aa30.07■■■□□ 2.41
TRAF4-207ENST00000461195 ADAMTS7Q9UKP4 1686 aa30.07■■■□□ 2.41
TRAF4-207ENST00000461195 PTGER2P43116 358 aa30.07■■■□□ 2.4
TRAF4-207ENST00000461195 AK7Q96M32 723 aa30.06■■■□□ 2.4
TRAF4-207ENST00000461195 RBM42Q9BTD8 480 aaKnown RBP30.06■■■□□ 2.4
TRAF4-207ENST00000461195 SLC52A2Q9HAB3 445 aa30.06■■■□□ 2.4
TRAF4-207ENST00000461195 MRC1P22897 1456 aa30.06■■■□□ 2.4
TRAF4-207ENST00000461195 ITPK1Q13572 414 aa30.05■■■□□ 2.4
TRAF4-207ENST00000461195 LINC00116Q8NCU8 138 aa30.05■■■□□ 2.4
TRAF4-207ENST00000461195 FCHSD2O94868 740 aa30.04■■■□□ 2.4
TRAF4-207ENST00000461195 MAP3K5Q99683 1374 aa30.03■■■□□ 2.4
TRAF4-207ENST00000461195 COL23A1Q86Y22 540 aaPredicted RBP30.03■■■□□ 2.4
TRAF4-207ENST00000461195 FLAD1Q8NFF5 587 aa30.03■■■□□ 2.4
TRAF4-207ENST00000461195 PHACTR3Q96KR7 559 aa30.03■■■□□ 2.4
TRAF4-207ENST00000461195 UBR3Q6ZT12 1888 aa30.02■■■□□ 2.4
TRAF4-207ENST00000461195 GNAT3A8MTJ3 354 aa30.02■■■□□ 2.4
TRAF4-207ENST00000461195 MSH5O43196 834 aa30.02■■■□□ 2.4
TRAF4-207ENST00000461195 SGIP1Q9BQI5 828 aa30.02■■■□□ 2.4
TRAF4-207ENST00000461195 SLC4A9Q96Q91 983 aa30.01■■■□□ 2.39
TRAF4-207ENST00000461195 COL24A1Q17RW2 1714 aa30■■■□□ 2.39
TRAF4-207ENST00000461195 PTCD1O75127 700 aaKnown RBP29.99■■■□□ 2.39
TRAF4-207ENST00000461195 COL5A3P25940 1745 aaPredicted RBP29.98■■■□□ 2.39
TRAF4-207ENST00000461195 MYBBP1AQ9BQG0 1328 aaKnown RBP29.96■■■□□ 2.39
TRAF4-207ENST00000461195 FHDC1Q9C0D6 1143 aaPredicted RBP29.96■■■□□ 2.39
TRAF4-207ENST00000461195 GNPATO15228 680 aa29.95■■■□□ 2.39
TRAF4-207ENST00000461195 SSFA2P28290 1259 aa29.95■■■□□ 2.39
TRAF4-207ENST00000461195 POLD1P28340 1107 aa29.95■■■□□ 2.39
TRAF4-207ENST00000461195 AMIGO3Q86WK7 504 aa29.95■■■□□ 2.39
TRAF4-207ENST00000461195 IL17REQ8NFR9 667 aa29.95■■■□□ 2.39
TRAF4-207ENST00000461195 ARXQ96QS3 562 aa29.95■■■□□ 2.39
TRAF4-207ENST00000461195 SYT17Q9BSW7 474 aa29.95■■■□□ 2.39
TRAF4-207ENST00000461195 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP29.94■■■□□ 2.38
TRAF4-207ENST00000461195 PHF14O94880 888 aa29.94■■■□□ 2.38
TRAF4-207ENST00000461195 CICQ96RK0 1608 aaPredicted RBP29.93■■■□□ 2.38
TRAF4-207ENST00000461195 TEFQ10587 303 aa29.93■■■□□ 2.38
TRAF4-207ENST00000461195 SLC39A6Q13433 755 aa29.93■■■□□ 2.38
TRAF4-207ENST00000461195 NEFMP07197 916 aa29.92■■■□□ 2.38
TRAF4-207ENST00000461195 TJP1Q07157 1748 aa29.92■■■□□ 2.38
TRAF4-207ENST00000461195 RC3H1Q5TC82 1133 aaKnown RBP29.92■■■□□ 2.38
TRAF4-207ENST00000461195 SIPA1L3O60292 1781 aaPredicted RBP29.92■■■□□ 2.38
TRAF4-207ENST00000461195 CNTNAP4Q9C0A0 1308 aa29.92■■■□□ 2.38
TRAF4-207ENST00000461195 SMIM5Q71RC9 77 aa29.91■■■□□ 2.38
TRAF4-207ENST00000461195 CEMIPQ8WUJ3 1361 aa29.9■■■□□ 2.38
TRAF4-207ENST00000461195 UTRNP46939 3433 aa29.9■■■□□ 2.38
TRAF4-207ENST00000461195 PNNQ9H307 717 aaKnown RBP29.89■■■□□ 2.38
TRAF4-207ENST00000461195 RTCBQ9Y3I0 505 aaKnown RBP29.89■■■□□ 2.38
TRAF4-207ENST00000461195 KCPQ6ZWJ8 1503 aa29.89■■■□□ 2.38
TRAF4-207ENST00000461195 UBR2Q8IWV8 1755 aa29.88■■■□□ 2.37
TRAF4-207ENST00000461195 MSL1Q68DK7 614 aa29.88■■■□□ 2.37
TRAF4-207ENST00000461195 RTF1Q92541 710 aaKnown RBP29.88■■■□□ 2.37
TRAF4-207ENST00000461195 MYH14Q7Z406 1995 aaKnown RBP29.88■■■□□ 2.37
TRAF4-207ENST00000461195 PRKRIP1Q9H875 184 aaPredicted RBP29.87■■■□□ 2.37
TRAF4-207ENST00000461195 TTC5Q8N0Z6 440 aa29.86■■■□□ 2.37
TRAF4-207ENST00000461195 PLEKHF1Q96S99 279 aa29.86■■■□□ 2.37
TRAF4-207ENST00000461195 ZNF316A6NFI3 1004 aaPredicted RBP29.85■■■□□ 2.37
TRAF4-207ENST00000461195 HTATSF1O43719 755 aaKnown RBP29.85■■■□□ 2.37
TRAF4-207ENST00000461195 CRKLP46109 303 aaKnown RBP29.85■■■□□ 2.37
TRAF4-207ENST00000461195 RPS6KA4O75676 772 aa29.84■■■□□ 2.37
TRAF4-207ENST00000461195 ADRA2BP18089 450 aa29.84■■■□□ 2.37
TRAF4-207ENST00000461195 TRAPPC3LQ5T215 181 aa29.84■■■□□ 2.37
TRAF4-207ENST00000461195 DNAJC10Q8IXB1 793 aa29.84■■■□□ 2.37
TRAF4-207ENST00000461195 DLG5Q8TDM6 1919 aa29.83■■■□□ 2.37
TRAF4-207ENST00000461195 MCM10Q7L590 875 aa29.83■■■□□ 2.37
TRAF4-207ENST00000461195 VSIG10Q8N0Z9 540 aa29.83■■■□□ 2.37
TRAF4-207ENST00000461195 MAPK8IP3Q9UPT6 1336 aa29.82■■■□□ 2.36
TRAF4-207ENST00000461195 ZNF790Q6PG37 636 aa29.82■■■□□ 2.36
TRAF4-207ENST00000461195 ZNF784Q8NCA9 323 aaPredicted RBP29.82■■■□□ 2.36
TRAF4-207ENST00000461195 BTBD11A6QL63 1104 aa29.8■■■□□ 2.36
TRAF4-207ENST00000461195 DCTN1Q14203 1278 aa29.79■■■□□ 2.36
TRAF4-207ENST00000461195 NFE2L2Q16236 605 aa29.79■■■□□ 2.36
TRAF4-207ENST00000461195 ARHGEF1Q92888 912 aaKnown RBP29.79■■■□□ 2.36
TRAF4-207ENST00000461195 CHD4Q14839 1912 aa29.79■■■□□ 2.36
TRAF4-207ENST00000461195 CYP19A1P11511 503 aaPredicted RBP29.78■■■□□ 2.36
TRAF4-207ENST00000461195 INTS5Q6P9B9 1019 aaKnown RBP29.78■■■□□ 2.36
TRAF4-207ENST00000461195 KLHL34Q8N239 644 aa29.78■■■□□ 2.36
TRAF4-207ENST00000461195 ZNF496Q96IT1 587 aaPredicted RBP29.78■■■□□ 2.36
TRAF4-207ENST00000461195 CCDC87Q9NVE4 849 aa29.78■■■□□ 2.36
TRAF4-207ENST00000461195 C4AP0C0L4 1744 aa29.77■■■□□ 2.36
TRAF4-207ENST00000461195 RFC4P35249 363 aa29.77■■■□□ 2.36
TRAF4-207ENST00000461195 HEG1Q9ULI3 1381 aa29.76■■■□□ 2.35
TRAF4-207ENST00000461195 WDR43Q15061 677 aaKnown RBP eCLIP29.75■■■□□ 2.35
TRAF4-207ENST00000461195 FMNL2Q96PY5 1086 aa29.75■■■□□ 2.35
TRAF4-207ENST00000461195 STARD3NLO95772 234 aa29.73■■■□□ 2.35
TRAF4-207ENST00000461195 TEX13AQ9BXU3 409 aaPredicted RBP29.73■■■□□ 2.35
TRAF4-207ENST00000461195 KCNQ3O43525 872 aa29.72■■■□□ 2.35
TRAF4-207ENST00000461195 TAF7Q15545 349 aaPredicted RBP29.71■■■□□ 2.35
TRAF4-207ENST00000461195 NLGN1Q8N2Q7 840 aa29.71■■■□□ 2.35
TRAF4-207ENST00000461195 SOS1Q07889 1333 aaPredicted RBP29.71■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms