RNA–Protein interactions for RNA: ENST00000461115.5

IFT88-204, Transcript of intraflagellar transport 88, humanhuman

TSL 2

Gene IFT88, Length 1,440 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-204ENST00000461115 BRINP3Q76B58 766 aa13.86□□□□□ -0.19
IFT88-204ENST00000461115 IL17REQ8NFR9 667 aa13.86□□□□□ -0.19
IFT88-204ENST00000461115 ZBTB40Q9NUA8 1239 aa13.86□□□□□ -0.19
IFT88-204ENST00000461115 N4BP2Q86UW6 1770 aaPredicted RBP13.86□□□□□ -0.19
IFT88-204ENST00000461115 ERBB3P21860 1342 aa13.85□□□□□ -0.19
IFT88-204ENST00000461115 CLCN6P51797 869 aa13.85□□□□□ -0.19
IFT88-204ENST00000461115 AMOTQ4VCS5 1084 aa13.85□□□□□ -0.19
IFT88-204ENST00000461115 TMEM57Q8N5G2 664 aa13.85□□□□□ -0.19
IFT88-204ENST00000461115 CHMP4BQ9H444 224 aaKnown RBP13.85□□□□□ -0.19
IFT88-204ENST00000461115 RGS12O14924 1447 aa13.85□□□□□ -0.19
IFT88-204ENST00000461115 ZNF335Q9H4Z2 1342 aaPredicted RBP13.84□□□□□ -0.19
IFT88-204ENST00000461115 ABCA3Q99758 1704 aa13.84□□□□□ -0.19
IFT88-204ENST00000461115 API5Q9BZZ5 524 aaKnown RBP13.84□□□□□ -0.19
IFT88-204ENST00000461115 AXIN2Q9Y2T1 843 aa13.84□□□□□ -0.19
IFT88-204ENST00000461115 ANKRD24Q8TF21 1146 aa13.83□□□□□ -0.2
IFT88-204ENST00000461115 PKD1L3Q7Z443 1732 aa13.83□□□□□ -0.2
IFT88-204ENST00000461115 TAF7Q15545 349 aaPredicted RBP13.82□□□□□ -0.2
IFT88-204ENST00000461115 AKAP4Q5JQC9 854 aa13.82□□□□□ -0.2
IFT88-204ENST00000461115 LTV1Q96GA3 475 aaPredicted RBP13.82□□□□□ -0.2
IFT88-204ENST00000461115 BACH2Q9BYV9 841 aa13.82□□□□□ -0.2
IFT88-204ENST00000461115 RWDD1Q9H446 243 aaPredicted RBP13.82□□□□□ -0.2
IFT88-204ENST00000461115 SLAIN2Q9P270 581 aa13.82□□□□□ -0.2
IFT88-204ENST00000461115 PTPRCP08575 1304 aa13.82□□□□□ -0.2
IFT88-204ENST00000461115 SCN11AQ9UI33 1791 aa13.82□□□□□ -0.2
IFT88-204ENST00000461115 ZBTB7BO15156 539 aaPredicted RBP13.81□□□□□ -0.2
IFT88-204ENST00000461115 PLEKHO1Q53GL0 409 aaPredicted RBP13.81□□□□□ -0.2
IFT88-204ENST00000461115 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.81□□□□□ -0.23e-7■■■■□ 22.8
IFT88-204ENST00000461115 PDE4AP27815 886 aa13.81□□□□□ -0.2
IFT88-204ENST00000461115 INTS3Q68E01 1043 aaKnown RBP13.81□□□□□ -0.2
IFT88-204ENST00000461115 SMC5Q8IY18 1101 aa13.81□□□□□ -0.2
IFT88-204ENST00000461115 LRRC59Q96AG4 307 aaKnown RBP13.81□□□□□ -0.2
IFT88-204ENST00000461115 TSPYL4Q9UJ04 414 aa13.81□□□□□ -0.2
IFT88-204ENST00000461115 ELL2O00472 640 aaPredicted RBP13.8□□□□□ -0.2
IFT88-204ENST00000461115 HOXB7P09629 217 aa13.8□□□□□ -0.2
IFT88-204ENST00000461115 ITPRIPQ8IWB1 547 aa13.8□□□□□ -0.2
IFT88-204ENST00000461115 PLCD3Q8N3E9 789 aa13.8□□□□□ -0.2
IFT88-204ENST00000461115 USHBP1Q8N6Y0 703 aa13.8□□□□□ -0.2
IFT88-204ENST00000461115 KRT24Q2M2I5 525 aa13.79□□□□□ -0.2
IFT88-204ENST00000461115 DDX17Q92841 729 aaKnown RBP13.79□□□□□ -0.2
IFT88-204ENST00000461115 HEG1Q9ULI3 1381 aa13.78□□□□□ -0.2
IFT88-204ENST00000461115 LMOD2Q6P5Q4 547 aa13.78□□□□□ -0.2
IFT88-204ENST00000461115 CHMP4AQ9BY43 222 aa13.77□□□□□ -0.21
IFT88-204ENST00000461115 PARP4Q9UKK3 1724 aaKnown RBP13.77□□□□□ -0.21
IFT88-204ENST00000461115 MNX1P50219 401 aaPredicted RBP13.76□□□□□ -0.21
IFT88-204ENST00000461115 PXDNLA1KZ92 1463 aa13.76□□□□□ -0.21
IFT88-204ENST00000461115 MRC1P22897 1456 aa13.76□□□□□ -0.21
IFT88-204ENST00000461115 LTBP4Q8N2S1 1624 aa13.75□□□□□ -0.21
IFT88-204ENST00000461115 RNMTO43148 476 aaKnown RBP13.75□□□□□ -0.21
IFT88-204ENST00000461115 ZC3H6P61129 1189 aaKnown RBP13.75□□□□□ -0.21
IFT88-204ENST00000461115 ZNF530Q6P9A1 599 aaPredicted RBP13.75□□□□□ -0.21
IFT88-204ENST00000461115 MIS18AQ9NYP9 233 aa13.75□□□□□ -0.21
IFT88-204ENST00000461115 FAM161AQ3B820 660 aa13.74□□□□□ -0.21
IFT88-204ENST00000461115 CCDC30Q5VVM6 783 aa13.74□□□□□ -0.21
IFT88-204ENST00000461115 SKAP1Q86WV1 359 aa13.74□□□□□ -0.21
IFT88-204ENST00000461115 LGR6Q9HBX8 967 aa13.74□□□□□ -0.21
IFT88-204ENST00000461115 AHDC1Q5TGY3 1603 aaPredicted RBP13.74□□□□□ -0.21
IFT88-204ENST00000461115 COL22A1Q8NFW1 1626 aaPredicted RBP13.74□□□□□ -0.21
IFT88-204ENST00000461115 MEGF6O75095 1541 aa13.73□□□□□ -0.21
IFT88-204ENST00000461115 EIF4A1P60842 406 aaKnown RBP13.73□□□□□ -0.21
IFT88-204ENST00000461115 C8orf34Q49A92 452 aa13.73□□□□□ -0.21
IFT88-204ENST00000461115 ZNF579Q8NAF0 562 aaKnown RBP13.73□□□□□ -0.21
IFT88-204ENST00000461115 FBXO3Q9UK99 471 aa13.73□□□□□ -0.21
IFT88-204ENST00000461115 PDZRN3Q9UPQ7 1066 aa13.73□□□□□ -0.21
IFT88-204ENST00000461115 COL5A2P05997 1499 aaPredicted RBP13.72□□□□□ -0.21
IFT88-204ENST00000461115 ZBTB7CA1YPR0 619 aa13.72□□□□□ -0.21
IFT88-204ENST00000461115 C1orf141Q5JVX7 400 aa13.72□□□□□ -0.21
IFT88-204ENST00000461115 CABLES1Q8TDN4 633 aa13.72□□□□□ -0.21
IFT88-204ENST00000461115 GCC1Q96CN9 775 aa13.72□□□□□ -0.21
IFT88-204ENST00000461115 KDM6AO15550 1401 aaPredicted RBP13.71□□□□□ -0.21
IFT88-204ENST00000461115 ATP10DQ9P241 1426 aa13.71□□□□□ -0.21
IFT88-204ENST00000461115 TATP17735 454 aaPredicted RBP13.71□□□□□ -0.22
IFT88-204ENST00000461115 CCT4P50991 539 aaKnown RBP13.71□□□□□ -0.22
IFT88-204ENST00000461115 RAPGEF4Q8WZA2 1011 aa13.71□□□□□ -0.22
IFT88-204ENST00000461115 STK31Q9BXU1 1019 aa13.71□□□□□ -0.22
IFT88-204ENST00000461115 WDR17Q8IZU2 1322 aa13.71□□□□□ -0.22
IFT88-204ENST00000461115 SHANK3Q9BYB0 1731 aa13.7□□□□□ -0.22
IFT88-204ENST00000461115 TEFQ10587 303 aa13.7□□□□□ -0.22
IFT88-204ENST00000461115 G2E3Q7L622 706 aa13.7□□□□□ -0.22
IFT88-204ENST00000461115 SIRT2Q8IXJ6 389 aa13.7□□□□□ -0.22
IFT88-204ENST00000461115 RPAP2Q8IXW5 612 aaPredicted RBP13.7□□□□□ -0.22
IFT88-204ENST00000461115 ZBTB47Q9UFB7 747 aaPredicted RBP13.7□□□□□ -0.22
IFT88-204ENST00000461115 SPG7Q9UQ90 795 aa13.7□□□□□ -0.22
IFT88-204ENST00000461115 IBTKQ9P2D0 1353 aaPredicted RBP13.7□□□□□ -0.22
IFT88-204ENST00000461115 PHKG2P15735 406 aa13.69□□□□□ -0.22
IFT88-204ENST00000461115 NUCB1Q02818 461 aa13.69□□□□□ -0.22
IFT88-204ENST00000461115 FLIIQ13045 1269 aa13.69□□□□□ -0.22
IFT88-204ENST00000461115 MPRIPQ6WCQ1 1025 aa13.69□□□□□ -0.22
IFT88-204ENST00000461115 NLRP2Q9NX02 1062 aa13.69□□□□□ -0.22
IFT88-204ENST00000461115 ROBO1Q9Y6N7 1651 aa13.68□□□□□ -0.22
IFT88-204ENST00000461115 BTBD11A6QL63 1104 aa13.68□□□□□ -0.22
IFT88-204ENST00000461115 RGS3P49796 1198 aa13.68□□□□□ -0.22
IFT88-204ENST00000461115 IFNL2Q8IZJ0 200 aa13.68□□□□□ -0.22
IFT88-204ENST00000461115 ANKRD44Q8N8A2 993 aa13.68□□□□□ -0.22
IFT88-204ENST00000461115 DCBLD2Q96PD2 775 aa13.67□□□□□ -0.22
IFT88-204ENST00000461115 COL14A1Q05707 1796 aaKnown RBP13.67□□□□□ -0.22
IFT88-204ENST00000461115 HSP90AB1P08238 724 aaKnown RBP13.66□□□□□ -0.22
IFT88-204ENST00000461115 CHRNA2Q15822 529 aa13.66□□□□□ -0.22
IFT88-204ENST00000461115 HDGFL1Q5TGJ6 251 aa13.66□□□□□ -0.22
IFT88-204ENST00000461115 CARD10Q9BWT7 1032 aa13.66□□□□□ -0.22
IFT88-204ENST00000461115 DCTPP1Q9H773 170 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms